RNA–Protein interactions for RNA: ENST00000261897.5

PRPF40B-201, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-201ENST00000261897 ITM2CQ9NQX7 267 aa16.18■□□□□ 0.18
PRPF40B-201ENST00000261897 GGA3Q9NZ52 723 aa16.18■□□□□ 0.18
PRPF40B-201ENST00000261897 EMCNQ9ULC0 261 aa16.18■□□□□ 0.18
PRPF40B-201ENST00000261897 HMX2A2RU54 273 aa16.17■□□□□ 0.18
PRPF40B-201ENST00000261897 H0YCG3 227 aa16.17■□□□□ 0.18
PRPF40B-201ENST00000261897 PSMD11O00231 422 aa16.17■□□□□ 0.18
PRPF40B-201ENST00000261897 UBDO15205 165 aa16.17■□□□□ 0.18
PRPF40B-201ENST00000261897 SUPT7LO94864 414 aa16.17■□□□□ 0.18
PRPF40B-201ENST00000261897 ALBP02768 609 aa16.17■□□□□ 0.18
PRPF40B-201ENST00000261897 MRPS15P82914 257 aaKnown RBP16.17■□□□□ 0.18
PRPF40B-201ENST00000261897 CTBP1Q13363 440 aa16.17■□□□□ 0.18
PRPF40B-201ENST00000261897 PDCD4Q53EL6 469 aaKnown RBP16.17■□□□□ 0.18
PRPF40B-201ENST00000261897 FSTL4Q6MZW2 842 aa16.17■□□□□ 0.18
PRPF40B-201ENST00000261897 FAM183BPQ6ZVS7 135 aa16.17■□□□□ 0.18
PRPF40B-201ENST00000261897 FIBCD1Q8N539 461 aa16.17■□□□□ 0.18
PRPF40B-201ENST00000261897 GMCL1P1Q8NEA9 526 aa16.17■□□□□ 0.18
PRPF40B-201ENST00000261897 CERS2Q96G23 380 aa16.17■□□□□ 0.18
PRPF40B-201ENST00000261897 SLC45A3Q96JT2 553 aa16.17■□□□□ 0.18
PRPF40B-201ENST00000261897 TWNKQ96RR1 684 aa16.17■□□□□ 0.18
PRPF40B-201ENST00000261897 STRA6Q9BX79 667 aa16.17■□□□□ 0.18
PRPF40B-201ENST00000261897 SDCBP2Q9H190 292 aa16.17■□□□□ 0.18
PRPF40B-201ENST00000261897 ABCB10Q9NRK6 738 aa16.17■□□□□ 0.18
PRPF40B-201ENST00000261897 ATAD3AQ9NVI7 634 aa16.17■□□□□ 0.18
PRPF40B-201ENST00000261897 DNAJC28Q9NX36 388 aa16.17■□□□□ 0.18
PRPF40B-201ENST00000261897 GIMAP2Q9UG22 337 aa16.17■□□□□ 0.18
PRPF40B-201ENST00000261897 FETUBQ9UGM5 382 aa16.17■□□□□ 0.18
PRPF40B-201ENST00000261897 PRPF19Q9UMS4 504 aaKnown RBP16.17■□□□□ 0.18
PRPF40B-201ENST00000261897 GOT1P17174 413 aa16.17■□□□□ 0.18
PRPF40B-201ENST00000261897 SULT2A1Q06520 285 aa16.17■□□□□ 0.18
PRPF40B-201ENST00000261897 PMS2P3Q13401 168 aa16.17■□□□□ 0.18
PRPF40B-201ENST00000261897 FAM83EQ2M2I3 478 aa16.17■□□□□ 0.18
PRPF40B-201ENST00000261897 GOLGA7BQ2TAP0 167 aa16.17■□□□□ 0.18
PRPF40B-201ENST00000261897 CERCAMQ5T4B2 595 aa16.17■□□□□ 0.18
PRPF40B-201ENST00000261897 KRT27Q7Z3Y8 459 aa16.17■□□□□ 0.18
PRPF40B-201ENST00000261897 C14orf80Q86SX3 495 aa16.17■□□□□ 0.18
PRPF40B-201ENST00000261897 ADCK1Q86TW2 530 aa16.17■□□□□ 0.18
PRPF40B-201ENST00000261897 SLC41A1Q8IVJ1 513 aa16.17■□□□□ 0.18
PRPF40B-201ENST00000261897 ZCCHC7Q8N3Z6 543 aaKnown RBP16.17■□□□□ 0.18
PRPF40B-201ENST00000261897 AFAP1L2Q8N4X5 818 aa16.17■□□□□ 0.18
PRPF40B-201ENST00000261897 DHRSXQ8N5I4 330 aa16.17■□□□□ 0.18
PRPF40B-201ENST00000261897 SIGLEC10Q96LC7 697 aa16.17■□□□□ 0.18
PRPF40B-201ENST00000261897 PDCD2LQ9BRP1 358 aa16.17■□□□□ 0.18
PRPF40B-201ENST00000261897 STN1Q9H668 368 aaKnown RBP16.17■□□□□ 0.18
PRPF40B-201ENST00000261897 PNMA8BQ9ULN7 279 aaPredicted RBP16.17■□□□□ 0.18
PRPF40B-201ENST00000261897 FADS3Q9Y5Q0 445 aa16.17■□□□□ 0.18
PRPF40B-201ENST00000261897 SNX9Q9Y5X1 595 aa16.17■□□□□ 0.18
PRPF40B-201ENST00000261897 SOCS2O14508 198 aa16.17■□□□□ 0.18
PRPF40B-201ENST00000261897 ANGPT2O15123 496 aa16.17■□□□□ 0.18
PRPF40B-201ENST00000261897 DHX15O43143 795 aaKnown RBP16.17■□□□□ 0.18
PRPF40B-201ENST00000261897 HTRA2O43464 458 aaPredicted RBP16.17■□□□□ 0.18
PRPF40B-201ENST00000261897 CNOT3O75175 753 aaKnown RBP16.17■□□□□ 0.18
PRPF40B-201ENST00000261897 BAIAP3O94812 1187 aa16.17■□□□□ 0.18
PRPF40B-201ENST00000261897 MFN2O95140 757 aa16.17■□□□□ 0.18
PRPF40B-201ENST00000261897 LSM8O95777 96 aaKnown RBP16.17■□□□□ 0.18
PRPF40B-201ENST00000261897 TRPC1P48995 793 aa16.17■□□□□ 0.18
PRPF40B-201ENST00000261897 CLCN2P51788 898 aa16.17■□□□□ 0.18
PRPF40B-201ENST00000261897 BMXP51813 675 aa16.17■□□□□ 0.18
PRPF40B-201ENST00000261897 PGM5Q15124 567 aa16.17■□□□□ 0.18
PRPF40B-201ENST00000261897 SNRNP48Q6IEG0 339 aaKnown RBP16.17■□□□□ 0.18
PRPF40B-201ENST00000261897 HHIPL2Q6UWX4 724 aa16.17■□□□□ 0.18
PRPF40B-201ENST00000261897 PIWIL3Q7Z3Z3 882 aaKnown RBP16.17■□□□□ 0.18
PRPF40B-201ENST00000261897 XYLT1Q86Y38 959 aa16.17■□□□□ 0.18
PRPF40B-201ENST00000261897 TRAPPC12Q8WVT3 735 aa16.17■□□□□ 0.18
PRPF40B-201ENST00000261897 HTR3CQ8WXA8 447 aa16.17■□□□□ 0.18
PRPF40B-201ENST00000261897 LPIN3Q9BQK8 851 aa16.17■□□□□ 0.18
PRPF40B-201ENST00000261897 ZNF302Q9NR11 478 aa16.17■□□□□ 0.18
PRPF40B-201ENST00000261897 TMPRSS4Q9NRS4 437 aa16.17■□□□□ 0.18
PRPF40B-201ENST00000261897 EXD2Q9NVH0 621 aa16.17■□□□□ 0.18
PRPF40B-201ENST00000261897 XPR1Q9UBH6 696 aa16.17■□□□□ 0.18
PRPF40B-201ENST00000261897 RIMS3Q9UJD0 308 aa16.17■□□□□ 0.18
PRPF40B-201ENST00000261897 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.16■□□□□ 0.18
PRPF40B-201ENST00000261897 EI24O14681 340 aa16.16■□□□□ 0.18
PRPF40B-201ENST00000261897 ASS1P00966 412 aaKnown RBP16.16■□□□□ 0.18
PRPF40B-201ENST00000261897 PTGER2P43116 358 aa16.16■□□□□ 0.18
PRPF40B-201ENST00000261897 CDH13P55290 713 aa16.16■□□□□ 0.18
PRPF40B-201ENST00000261897 POU6F1Q14863 301 aa16.16■□□□□ 0.18
PRPF40B-201ENST00000261897 PAGE2BQ5JRK9 111 aa16.16■□□□□ 0.18
PRPF40B-201ENST00000261897 METTL21CQ5VZV1 264 aa16.16■□□□□ 0.18
PRPF40B-201ENST00000261897 PGAM4Q8N0Y7 254 aa16.16■□□□□ 0.18
PRPF40B-201ENST00000261897 CROTQ9UKG9 612 aa16.16■□□□□ 0.18
PRPF40B-201ENST00000261897 TSPAN16Q9UKR8 245 aa16.16■□□□□ 0.18
PRPF40B-201ENST00000261897 OAZ3Q9UMX2 235 aa16.16■□□□□ 0.18
PRPF40B-201ENST00000261897 PPME1Q9Y570 386 aa16.16■□□□□ 0.18
PRPF40B-201ENST00000261897 PRKCBP05771 671 aa16.16■□□□□ 0.18
PRPF40B-201ENST00000261897 STX5Q13190 355 aa16.16■□□□□ 0.18
PRPF40B-201ENST00000261897 CLEC6AQ6EIG7 209 aa16.16■□□□□ 0.18
PRPF40B-201ENST00000261897 TMC5Q6UXY8 1006 aa16.16■□□□□ 0.18
PRPF40B-201ENST00000261897 RNF145Q96MT1 663 aa16.16■□□□□ 0.18
PRPF40B-201ENST00000261897 ADI1Q9BV57 179 aa16.16■□□□□ 0.18
PRPF40B-201ENST00000261897 SLC8A2Q9UPR5 921 aa16.16■□□□□ 0.18
PRPF40B-201ENST00000261897 PCDHB12Q9Y5F1 795 aa16.16■□□□□ 0.18
PRPF40B-201ENST00000261897 COPG1Q9Y678 874 aaKnown RBP16.16■□□□□ 0.18
PRPF40B-201ENST00000261897 MTHFD1P11586 935 aaKnown RBP16.15■□□□□ 0.18
PRPF40B-201ENST00000261897 MYL4P12829 197 aa16.15■□□□□ 0.18
PRPF40B-201ENST00000261897 PSMA4P25789 261 aaKnown RBP16.15■□□□□ 0.18
PRPF40B-201ENST00000261897 SERPINB1P30740 379 aa16.15■□□□□ 0.18
PRPF40B-201ENST00000261897 GSSP48637 474 aa16.15■□□□□ 0.18
PRPF40B-201ENST00000261897 ADAM17P78536 824 aa16.15■□□□□ 0.18
PRPF40B-201ENST00000261897 DAB2P98082 770 aa16.15■□□□□ 0.18
PRPF40B-201ENST00000261897 FAM35AQ86V20 835 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms