RNA–Protein interactions for RNA: ENST00000261007.9

CHRNA1-201, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNA1, Length 1,980 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-201ENST00000261007 KLF10Q13118 480 aa11.01□□□□□ -0.65
CHRNA1-201ENST00000261007 MMRN1Q13201 1228 aa11.01□□□□□ -0.65
CHRNA1-201ENST00000261007 SPIDRQ14159 915 aa11.01□□□□□ -0.65
CHRNA1-201ENST00000261007 SH3PXD2AQ5TCZ1 1133 aa11.01□□□□□ -0.65
CHRNA1-201ENST00000261007 FAXCQ5TGI0 409 aa11.01□□□□□ -0.65
CHRNA1-201ENST00000261007 MROH9Q5TGP6 573 aa11.01□□□□□ -0.65
CHRNA1-201ENST00000261007 CST9Q5W186 159 aa11.01□□□□□ -0.65
CHRNA1-201ENST00000261007 IFNL1Q8IU54 200 aa11.01□□□□□ -0.65
CHRNA1-201ENST00000261007 SMYD1Q8NB12 490 aa11.01□□□□□ -0.65
CHRNA1-201ENST00000261007 B3GALNT2Q8NCR0 500 aa11.01□□□□□ -0.65
CHRNA1-201ENST00000261007 SMG8Q8ND04 991 aaKnown RBP11.01□□□□□ -0.65
CHRNA1-201ENST00000261007 CEP70Q8NHQ1 597 aa11.01□□□□□ -0.65
CHRNA1-201ENST00000261007 PIWIL1Q96J94 861 aaKnown RBP11.01□□□□□ -0.65
CHRNA1-201ENST00000261007 CNBD2Q96M20 576 aa11.01□□□□□ -0.65
CHRNA1-201ENST00000261007 SORT1Q99523 831 aa11.01□□□□□ -0.65
CHRNA1-201ENST00000261007 EBNA1BP2Q99848 306 aaKnown RBP11.01□□□□□ -0.65
CHRNA1-201ENST00000261007 DUSP16Q9BY84 665 aa11.01□□□□□ -0.65
CHRNA1-201ENST00000261007 DPEP3Q9H4B8 488 aa11.01□□□□□ -0.65
CHRNA1-201ENST00000261007 GJD2Q9UKL4 321 aa11.01□□□□□ -0.65
CHRNA1-201ENST00000261007 EMCNQ9ULC0 261 aa11.01□□□□□ -0.65
CHRNA1-201ENST00000261007 PAIP2BQ9ULR5 123 aaKnown RBP11.01□□□□□ -0.65
CHRNA1-201ENST00000261007 STAP1Q9ULZ2 295 aa11.01□□□□□ -0.65
CHRNA1-201ENST00000261007 NME7Q9Y5B8 376 aa11.01□□□□□ -0.65
CHRNA1-201ENST00000261007 PCDHA11Q9Y5I1 949 aa11.01□□□□□ -0.65
CHRNA1-201ENST00000261007 H3BSA7 217 aa11.01□□□□□ -0.65
CHRNA1-201ENST00000261007 PIK3R2O00459 728 aa11.01□□□□□ -0.65
CHRNA1-201ENST00000261007 SLC22A2O15244 555 aa11.01□□□□□ -0.65
CHRNA1-201ENST00000261007 UGT1A9O60656 530 aa11.01□□□□□ -0.65
CHRNA1-201ENST00000261007 NCF2P19878 526 aaPredicted RBP11.01□□□□□ -0.65
CHRNA1-201ENST00000261007 IL4RP24394 825 aa11.01□□□□□ -0.65
CHRNA1-201ENST00000261007 ARL4AP40617 200 aa11.01□□□□□ -0.65
CHRNA1-201ENST00000261007 LHX1P48742 406 aa11.01□□□□□ -0.65
CHRNA1-201ENST00000261007 AIF1P55008 147 aa11.01□□□□□ -0.65
CHRNA1-201ENST00000261007 GJA9P57773 515 aa11.01□□□□□ -0.65
CHRNA1-201ENST00000261007 ABCE1P61221 599 aaKnown RBP11.01□□□□□ -0.65
CHRNA1-201ENST00000261007 NKX3-2P78367 333 aa11.01□□□□□ -0.65
CHRNA1-201ENST00000261007 COG7P83436 770 aa11.01□□□□□ -0.65
CHRNA1-201ENST00000261007 SREBF2Q12772 1141 aa11.01□□□□□ -0.65
CHRNA1-201ENST00000261007 NAB1Q13506 487 aa11.01□□□□□ -0.65
CHRNA1-201ENST00000261007 MFSD14CQ5VZR4 134 aa11.01□□□□□ -0.65
CHRNA1-201ENST00000261007 RGMBQ6NW40 437 aa11.01□□□□□ -0.65
CHRNA1-201ENST00000261007 PACS1Q6VY07 963 aa11.01□□□□□ -0.65
CHRNA1-201ENST00000261007 PQLC3Q8N755 202 aa11.01□□□□□ -0.65
CHRNA1-201ENST00000261007 SLC2A14Q8TDB8 520 aa11.01□□□□□ -0.65
CHRNA1-201ENST00000261007 SIGLEC10Q96LC7 697 aa11.01□□□□□ -0.65
CHRNA1-201ENST00000261007 PPP1R10Q96QC0 940 aaKnown RBP11.01□□□□□ -0.65
CHRNA1-201ENST00000261007 TRIM56Q9BRZ2 755 aaKnown RBP11.01□□□□□ -0.65
CHRNA1-201ENST00000261007 UGT1A7Q9HAW7 530 aa11.01□□□□□ -0.65
CHRNA1-201ENST00000261007 UGT1A10Q9HAW8 530 aa11.01□□□□□ -0.65
CHRNA1-201ENST00000261007 UGT1A8Q9HAW9 530 aa11.01□□□□□ -0.65
CHRNA1-201ENST00000261007 KLK14Q9P0G3 267 aa11.01□□□□□ -0.65
CHRNA1-201ENST00000261007 APPL1Q9UKG1 709 aa11.01□□□□□ -0.65
CHRNA1-201ENST00000261007 CDY2AQ9Y6F7 541 aa11.01□□□□□ -0.65
CHRNA1-201ENST00000261007 CDY1Q9Y6F8 540 aa11.01□□□□□ -0.65
CHRNA1-201ENST00000261007 PRSS51A0A1B0GVH4 220 aa11□□□□□ -0.65
CHRNA1-201ENST00000261007 GABRDO14764 452 aa11□□□□□ -0.65
CHRNA1-201ENST00000261007 SPTLC1O15269 473 aa11□□□□□ -0.65
CHRNA1-201ENST00000261007 KCNN4O15554 427 aa11□□□□□ -0.65
CHRNA1-201ENST00000261007 CBFA2T3O75081 653 aa11□□□□□ -0.65
CHRNA1-201ENST00000261007 PDGFRBP09619 1106 aa11□□□□□ -0.65
CHRNA1-201ENST00000261007 NPR3P17342 541 aa11□□□□□ -0.65
CHRNA1-201ENST00000261007 TPSB2P20231 275 aa11□□□□□ -0.65
CHRNA1-201ENST00000261007 CYP2F1P24903 491 aa11□□□□□ -0.65
CHRNA1-201ENST00000261007 NUP107P57740 925 aa11□□□□□ -0.65
CHRNA1-201ENST00000261007 RPL10AP62906 217 aaKnown RBP11□□□□□ -0.65
CHRNA1-201ENST00000261007 TUBA4AP68366 448 aa11□□□□□ -0.65
CHRNA1-201ENST00000261007 BEX3Q00994 111 aa11□□□□□ -0.65
CHRNA1-201ENST00000261007 PCLAFQ15004 111 aa11□□□□□ -0.65
CHRNA1-201ENST00000261007 TPSAB1Q15661 275 aa11□□□□□ -0.65
CHRNA1-201ENST00000261007 CCL14Q16627 93 aa11□□□□□ -0.65
CHRNA1-201ENST00000261007 SLC25A52Q3SY17 297 aa11□□□□□ -0.65
CHRNA1-201ENST00000261007 SLC44A4Q53GD3 710 aa11□□□□□ -0.65
CHRNA1-201ENST00000261007 N4BP2L1Q5TBK1 243 aaPredicted RBP11□□□□□ -0.65
CHRNA1-201ENST00000261007 IYDQ6PHW0 289 aa11□□□□□ -0.65
CHRNA1-201ENST00000261007 POTEHQ6S545 545 aa11□□□□□ -0.65
CHRNA1-201ENST00000261007 EPGNQ6UW88 154 aa11□□□□□ -0.65
CHRNA1-201ENST00000261007 TRIM67Q6ZTA4 783 aa11□□□□□ -0.65
CHRNA1-201ENST00000261007 SETD3Q86TU7 594 aaPredicted RBP11□□□□□ -0.65
CHRNA1-201ENST00000261007 PCDH19Q8TAB3 1148 aa11□□□□□ -0.65
CHRNA1-201ENST00000261007 DEPDC1BQ8WUY9 529 aa11□□□□□ -0.65
CHRNA1-201ENST00000261007 STON2Q8WXE9 905 aa11□□□□□ -0.65
CHRNA1-201ENST00000261007 UPF3AQ9H1J1 476 aaKnown RBP11□□□□□ -0.65
CHRNA1-201ENST00000261007 CXCL16Q9H2A7 254 aa11□□□□□ -0.65
CHRNA1-201ENST00000261007 PNPOQ9NVS9 261 aa11□□□□□ -0.65
CHRNA1-201ENST00000261007 MOCS1Q9NZB8 636 aa11□□□□□ -0.65
CHRNA1-201ENST00000261007 AP4E1Q9UPM8 1137 aa11□□□□□ -0.65
CHRNA1-201ENST00000261007 GIT1Q9Y2X7 761 aa11□□□□□ -0.65
CHRNA1-201ENST00000261007 LOC100653049A0A140TA62 436 aa10.99□□□□□ -0.65
CHRNA1-201ENST00000261007 GPR182O15218 404 aa10.99□□□□□ -0.65
CHRNA1-201ENST00000261007 GABBR2O75899 941 aa10.99□□□□□ -0.65
CHRNA1-201ENST00000261007 KRT34O76011 436 aa10.99□□□□□ -0.65
CHRNA1-201ENST00000261007 SLC10A3P09131 477 aa10.99□□□□□ -0.65
CHRNA1-201ENST00000261007 LCP1P13796 627 aa10.99□□□□□ -0.65
CHRNA1-201ENST00000261007 PTPN1P18031 435 aaKnown RBP10.99□□□□□ -0.65
CHRNA1-201ENST00000261007 ADSLP30566 484 aaPredicted RBP10.99□□□□□ -0.65
CHRNA1-201ENST00000261007 RPL9P32969 192 aaKnown RBP10.99□□□□□ -0.65
CHRNA1-201ENST00000261007 NOS2P35228 1153 aa10.99□□□□□ -0.65
CHRNA1-201ENST00000261007 ZNF135P52742 658 aaPredicted RBP10.99□□□□□ -0.65
CHRNA1-201ENST00000261007 TXNL4AP83876 142 aaKnown RBP10.99□□□□□ -0.65
CHRNA1-201ENST00000261007 MTA1Q13330 715 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms