RNA–Protein interactions for RNA: ENST00000257909.7

TROAP-201, Transcript of trophinin associated protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TROAP, Length 2,527 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-201ENST00000257909 GRIA4P48058 902 aa11.69□□□□□ -0.54
TROAP-201ENST00000257909 NME5P56597 212 aa11.69□□□□□ -0.54
TROAP-201ENST00000257909 PRAMEP78395 509 aa11.69□□□□□ -0.54
TROAP-201ENST00000257909 SP4Q02446 784 aa11.69□□□□□ -0.54
TROAP-201ENST00000257909 GBE1Q04446 702 aa11.69□□□□□ -0.54
TROAP-201ENST00000257909 MAPRE2Q15555 327 aa11.69□□□□□ -0.54
TROAP-201ENST00000257909 ARL13AQ5H913 290 aaPredicted RBP11.69□□□□□ -0.54
TROAP-201ENST00000257909 TMEM198Q66K66 360 aa11.69□□□□□ -0.54
TROAP-201ENST00000257909 FSTL4Q6MZW2 842 aa11.69□□□□□ -0.54
TROAP-201ENST00000257909 COLGALT2Q8IYK4 626 aa11.69□□□□□ -0.54
TROAP-201ENST00000257909 HTR3CQ8WXA8 447 aa11.69□□□□□ -0.54
TROAP-201ENST00000257909 LPGAT1Q92604 370 aa11.69□□□□□ -0.54
TROAP-201ENST00000257909 SLCO4A1Q96BD0 722 aa11.69□□□□□ -0.54
TROAP-201ENST00000257909 PPWD1Q96BP3 646 aaKnown RBP11.69□□□□□ -0.54
TROAP-201ENST00000257909 TMEM176AQ96HP8 235 aa11.69□□□□□ -0.54
TROAP-201ENST00000257909 CDHR1Q96JP9 859 aa11.69□□□□□ -0.54
TROAP-201ENST00000257909 AGAP3Q96P47 875 aa11.69□□□□□ -0.54
TROAP-201ENST00000257909 PPP1R10Q96QC0 940 aaKnown RBP11.69□□□□□ -0.54
TROAP-201ENST00000257909 TCF12Q99081 682 aa11.69□□□□□ -0.54
TROAP-201ENST00000257909 MRPL4Q9BYD3 311 aaKnown RBP11.69□□□□□ -0.54
TROAP-201ENST00000257909 GLIS2Q9BZE0 524 aaPredicted RBP11.69□□□□□ -0.54
TROAP-201ENST00000257909 GID8Q9NWU2 228 aa11.69□□□□□ -0.54
TROAP-201ENST00000257909 TMEM9Q9P0T7 183 aa11.69□□□□□ -0.54
TROAP-201ENST00000257909 FAM32AQ9Y421 112 aaKnown RBP11.69□□□□□ -0.54
TROAP-201ENST00000257909 PSME4Q14997 1843 aa11.69□□□□□ -0.54
TROAP-201ENST00000257909 HACD1B0YJ81 288 aa11.69□□□□□ -0.54
TROAP-201ENST00000257909 TRIM24O15164 1050 aa11.69□□□□□ -0.54
TROAP-201ENST00000257909 XPOTO43592 962 aaKnown RBP11.69□□□□□ -0.54
TROAP-201ENST00000257909 SNAP91O60641 907 aa11.69□□□□□ -0.54
TROAP-201ENST00000257909 HOXC6P09630 235 aa11.69□□□□□ -0.54
TROAP-201ENST00000257909 VDRP11473 427 aa11.69□□□□□ -0.54
TROAP-201ENST00000257909 GABRB3P28472 473 aa11.69□□□□□ -0.54
TROAP-201ENST00000257909 CA9Q16790 459 aa11.69□□□□□ -0.54
TROAP-201ENST00000257909 RGS21Q2M5E4 152 aa11.69□□□□□ -0.54
TROAP-201ENST00000257909 HMBOX1Q6NT76 420 aa11.69□□□□□ -0.54
TROAP-201ENST00000257909 ZYG11AQ6WRX3 759 aa11.69□□□□□ -0.54
TROAP-201ENST00000257909 FAM183BPQ6ZVS7 135 aa11.69□□□□□ -0.54
TROAP-201ENST00000257909 CHSY3Q70JA7 882 aa11.69□□□□□ -0.54
TROAP-201ENST00000257909 STRA8Q7Z7C7 330 aa11.69□□□□□ -0.54
TROAP-201ENST00000257909 CAMK1DQ8IU85 385 aa11.69□□□□□ -0.54
TROAP-201ENST00000257909 CDAN1Q8IWY9 1227 aa11.69□□□□□ -0.54
TROAP-201ENST00000257909 COLGALT1Q8NBJ5 622 aa11.69□□□□□ -0.54
TROAP-201ENST00000257909 URGCPQ8TCY9 931 aa11.69□□□□□ -0.54
TROAP-201ENST00000257909 FAM151AQ8WW52 585 aa11.69□□□□□ -0.54
TROAP-201ENST00000257909 TRUB1Q8WWH5 349 aaKnown RBP11.69□□□□□ -0.54
TROAP-201ENST00000257909 PCDHAC1Q9H158 963 aa11.69□□□□□ -0.54
TROAP-201ENST00000257909 SYBUQ9NX95 663 aa11.69□□□□□ -0.54
TROAP-201ENST00000257909 CPSF3Q9UKF6 684 aaKnown RBP11.69□□□□□ -0.54
TROAP-201ENST00000257909 SARDHQ9UL12 918 aa11.69□□□□□ -0.54
TROAP-201ENST00000257909 CNOT6Q9ULM6 557 aaKnown RBP11.69□□□□□ -0.54
TROAP-201ENST00000257909 B3GNT3Q9Y2A9 372 aa11.69□□□□□ -0.54
TROAP-201ENST00000257909 TRIM17Q9Y577 477 aa11.69□□□□□ -0.54
TROAP-201ENST00000257909 SLC30A1Q9Y6M5 507 aa11.69□□□□□ -0.54
TROAP-201ENST00000257909 PTPRFP10586 1907 aa11.69□□□□□ -0.54
TROAP-201ENST00000257909 TANC1Q9C0D5 1861 aa11.68□□□□□ -0.54
TROAP-201ENST00000257909 E7ENX8 843 aa11.68□□□□□ -0.54
TROAP-201ENST00000257909 FOXD2O60548 495 aaPredicted RBP11.68□□□□□ -0.54
TROAP-201ENST00000257909 NOL3O60936 208 aaKnown RBP11.68□□□□□ -0.54
TROAP-201ENST00000257909 SULT1C4O75897 302 aa11.68□□□□□ -0.54
TROAP-201ENST00000257909 CABYRO75952 493 aa11.68□□□□□ -0.54
TROAP-201ENST00000257909 C2P06681 752 aa11.68□□□□□ -0.54
TROAP-201ENST00000257909 SUPT20HL2P0C7V6 817 aa11.68□□□□□ -0.54
TROAP-201ENST00000257909 SDC4P31431 198 aa11.68□□□□□ -0.54
TROAP-201ENST00000257909 EFNA5P52803 228 aa11.68□□□□□ -0.54
TROAP-201ENST00000257909 CDH8P55286 799 aa11.68□□□□□ -0.54
TROAP-201ENST00000257909 PRKCQQ04759 706 aa11.68□□□□□ -0.54
TROAP-201ENST00000257909 SUPT20HL1Q3ZLR7 823 aa11.68□□□□□ -0.54
TROAP-201ENST00000257909 DCAF6Q58WW2 860 aa11.68□□□□□ -0.54
TROAP-201ENST00000257909 INTS11Q5TA45 600 aaKnown RBP11.68□□□□□ -0.54
TROAP-201ENST00000257909 OGFOD2Q6N063 350 aa11.68□□□□□ -0.54
TROAP-201ENST00000257909 PTAR1Q7Z6K3 402 aaPredicted RBP11.68□□□□□ -0.54
TROAP-201ENST00000257909 TMEM110Q86TL2 294 aa11.68□□□□□ -0.54
TROAP-201ENST00000257909 SCAIQ8N9R8 606 aa11.68□□□□□ -0.54
TROAP-201ENST00000257909 CNDP2Q96KP4 475 aaKnown RBP11.68□□□□□ -0.54
TROAP-201ENST00000257909 TDRD1Q9BXT4 1180 aaKnown RBP11.68□□□□□ -0.54
TROAP-201ENST00000257909 ACE2Q9BYF1 805 aaPredicted RBP11.68□□□□□ -0.54
TROAP-201ENST00000257909 UPF3AQ9H1J1 476 aaKnown RBP11.68□□□□□ -0.54
TROAP-201ENST00000257909 DHX35Q9H5Z1 703 aaKnown RBP11.68□□□□□ -0.54
TROAP-201ENST00000257909 SPAG4Q9NPE6 437 aa11.68□□□□□ -0.54
TROAP-201ENST00000257909 ARMC1Q9NVT9 282 aa11.68□□□□□ -0.54
TROAP-201ENST00000257909 ZDHHC2Q9UIJ5 367 aa11.68□□□□□ -0.54
TROAP-201ENST00000257909 A0A1W2PPW3 197 aa11.68□□□□□ -0.54
TROAP-201ENST00000257909 TRPC5OSA6NMA1 111 aa11.68□□□□□ -0.54
TROAP-201ENST00000257909 TIMM44O43615 452 aa11.68□□□□□ -0.54
TROAP-201ENST00000257909 B4GALT4O60513 344 aa11.68□□□□□ -0.54
TROAP-201ENST00000257909 CILPO75339 1184 aa11.68□□□□□ -0.54
TROAP-201ENST00000257909 CKMT2P17540 419 aa11.68□□□□□ -0.54
TROAP-201ENST00000257909 IRF9Q00978 393 aa11.68□□□□□ -0.54
TROAP-201ENST00000257909 ZBTB17Q13105 803 aa11.68□□□□□ -0.54
TROAP-201ENST00000257909 ORC1Q13415 861 aa11.68□□□□□ -0.54
TROAP-201ENST00000257909 CAPSQ13938 189 aa11.68□□□□□ -0.54
TROAP-201ENST00000257909 SEPT6Q14141 434 aa11.68□□□□□ -0.54
TROAP-201ENST00000257909 BCL2A1Q16548 175 aa11.68□□□□□ -0.54
TROAP-201ENST00000257909 DPYSL2Q16555 572 aa11.68□□□□□ -0.54
TROAP-201ENST00000257909 KIZQ2M2Z5 673 aa11.68□□□□□ -0.54
TROAP-201ENST00000257909 GPR107Q5VW38 600 aa11.68□□□□□ -0.54
TROAP-201ENST00000257909 XKR5Q6UX68 686 aa11.68□□□□□ -0.54
TROAP-201ENST00000257909 SIX6OS1Q8N1H7 587 aa11.68□□□□□ -0.54
TROAP-201ENST00000257909 PCDH20Q8N6Y1 951 aaKnown RBP11.68□□□□□ -0.54
TROAP-201ENST00000257909 TSNARE1Q96NA8 513 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms