RNA–Protein interactions for RNA: ENST00000257548.9

USP30-201, Transcript of ubiquitin specific peptidase 30, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP30, Length 3,742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-201ENST00000257548 PYROXD2Q8N2H3 581 aa12.53□□□□□ -0.4
USP30-201ENST00000257548 CENPSQ8N2Z9 138 aa12.53□□□□□ -0.4
USP30-201ENST00000257548 MARVELD2Q8N4S9 558 aa12.53□□□□□ -0.4
USP30-201ENST00000257548 CELF6Q96J87 481 aaKnown RBP12.53□□□□□ -0.4
USP30-201ENST00000257548 FSD1LQ9BXM9 530 aa12.53□□□□□ -0.4
USP30-201ENST00000257548 TRIM15Q9C019 465 aa12.53□□□□□ -0.4
USP30-201ENST00000257548 PCDH18Q9HCL0 1135 aa12.53□□□□□ -0.4
USP30-201ENST00000257548 HMGXB4Q9UGU5 601 aa12.53□□□□□ -0.4
USP30-201ENST00000257548 PRPF19Q9UMS4 504 aaKnown RBP12.53□□□□□ -0.4
USP30-201ENST00000257548 GJA3Q9Y6H8 435 aa12.53□□□□□ -0.4
USP30-201ENST00000257548 PLCH1Q4KWH8 1693 aa12.53□□□□□ -0.4
USP30-201ENST00000257548 ADGRA2Q96PE1 1338 aa12.53□□□□□ -0.4
USP30-201ENST00000257548 E7ENX8 843 aa12.52□□□□□ -0.4
USP30-201ENST00000257548 OGTO15294 1046 aa12.52□□□□□ -0.4
USP30-201ENST00000257548 NRP2O60462 931 aa12.52□□□□□ -0.4
USP30-201ENST00000257548 DAB1O75553 588 aa12.52□□□□□ -0.4
USP30-201ENST00000257548 DDHD2O94830 711 aa12.52□□□□□ -0.4
USP30-201ENST00000257548 JCHAINP01591 159 aa12.52□□□□□ -0.4
USP30-201ENST00000257548 ATP6V1B2P21281 511 aa12.52□□□□□ -0.4
USP30-201ENST00000257548 CNTFP26441 200 aa12.52□□□□□ -0.4
USP30-201ENST00000257548 TCF7P36402 384 aaPredicted RBP12.52□□□□□ -0.4
USP30-201ENST00000257548 SEPHS1P49903 392 aa12.52□□□□□ -0.4
USP30-201ENST00000257548 CLCN3P51790 818 aa12.52□□□□□ -0.4
USP30-201ENST00000257548 CRY2Q49AN0 593 aa12.52□□□□□ -0.4
USP30-201ENST00000257548 CERCAMQ5T4B2 595 aa12.52□□□□□ -0.4
USP30-201ENST00000257548 KCNMB4Q86W47 210 aa12.52□□□□□ -0.4
USP30-201ENST00000257548 PCDH19Q8TAB3 1148 aa12.52□□□□□ -0.4
USP30-201ENST00000257548 DQX1Q8TE96 717 aaKnown RBP12.52□□□□□ -0.4
USP30-201ENST00000257548 NDRG1Q92597 394 aaKnown RBP12.52□□□□□ -0.4
USP30-201ENST00000257548 DLG3Q92796 817 aa12.52□□□□□ -0.4
USP30-201ENST00000257548 TAMM41Q96BW9 452 aa12.52□□□□□ -0.4
USP30-201ENST00000257548 PIWIL1Q96J94 861 aaKnown RBP12.52□□□□□ -0.4
USP30-201ENST00000257548 NT5C1AQ9BXI3 368 aa12.52□□□□□ -0.4
USP30-201ENST00000257548 FRMD8P1Q9BZ68 369 aaPredicted RBP12.52□□□□□ -0.4
USP30-201ENST00000257548 LRRC40Q9H9A6 602 aa12.52□□□□□ -0.4
USP30-201ENST00000257548 ABCB10Q9NRK6 738 aa12.52□□□□□ -0.4
USP30-201ENST00000257548 NCKIPSDQ9NZQ3 722 aa12.52□□□□□ -0.4
USP30-201ENST00000257548 FADS3Q9Y5Q0 445 aa12.52□□□□□ -0.4
USP30-201ENST00000257548 TNRC6CQ9HCJ0 1690 aaKnown RBP12.52□□□□□ -0.4
USP30-201ENST00000257548 TMX2-CTNND1H3BSU7 103 aa12.52□□□□□ -0.41
USP30-201ENST00000257548 TCEAL1Q15170 157 aa12.52□□□□□ -0.41
USP30-201ENST00000257548 CYP2A13Q16696 494 aa12.52□□□□□ -0.41
USP30-201ENST00000257548 MGAT5BQ3V5L5 792 aa12.52□□□□□ -0.41
USP30-201ENST00000257548 ATF7IP2Q5U623 682 aa12.52□□□□□ -0.41
USP30-201ENST00000257548 FSTL4Q6MZW2 842 aa12.52□□□□□ -0.41
USP30-201ENST00000257548 PDZD4Q76G19 769 aaPredicted RBP12.52□□□□□ -0.41
USP30-201ENST00000257548 SLC41A1Q8IVJ1 513 aa12.52□□□□□ -0.41
USP30-201ENST00000257548 FBXL20Q96IG2 436 aa12.52□□□□□ -0.41
USP30-201ENST00000257548 VPS39Q96JC1 886 aa12.52□□□□□ -0.41
USP30-201ENST00000257548 SLC29A1Q99808 456 aa12.52□□□□□ -0.41
USP30-201ENST00000257548 SENP6Q9GZR1 1112 aaPredicted RBP12.52□□□□□ -0.41
USP30-201ENST00000257548 GPRC5DQ9NZD1 345 aa12.52□□□□□ -0.41
USP30-201ENST00000257548 SUN2Q9UH99 717 aa12.52□□□□□ -0.41
USP30-201ENST00000257548 ZNF510Q9Y2H8 683 aa12.52□□□□□ -0.41
USP30-201ENST00000257548 HES2Q9Y543 173 aa12.52□□□□□ -0.41
USP30-201ENST00000257548 NDUFB5O43674 189 aa12.52□□□□□ -0.41
USP30-201ENST00000257548 TADA2AO75478 443 aa12.52□□□□□ -0.41
USP30-201ENST00000257548 GFAPP14136 432 aa12.52□□□□□ -0.41
USP30-201ENST00000257548 EPHX2P34913 555 aa12.52□□□□□ -0.41
USP30-201ENST00000257548 IREB2P48200 963 aaKnown RBP12.52□□□□□ -0.41
USP30-201ENST00000257548 TPTEP56180 551 aa12.52□□□□□ -0.41
USP30-201ENST00000257548 SNAPC2Q13487 334 aa12.52□□□□□ -0.41
USP30-201ENST00000257548 DNASE1L3Q13609 305 aa12.52□□□□□ -0.41
USP30-201ENST00000257548 CCDC153Q494R4 210 aa12.52□□□□□ -0.41
USP30-201ENST00000257548 CAMK1DQ8IU85 385 aa12.52□□□□□ -0.41
USP30-201ENST00000257548 ZFYVE19Q96K21 471 aa12.52□□□□□ -0.41
USP30-201ENST00000257548 STK32BQ9NY57 414 aa12.52□□□□□ -0.41
USP30-201ENST00000257548 CSADQ9Y600 493 aa12.52□□□□□ -0.41
USP30-201ENST00000257548 GMEB1Q9Y692 573 aa12.52□□□□□ -0.41
USP30-201ENST00000257548 TSPAN3O60637 253 aa12.51□□□□□ -0.41
USP30-201ENST00000257548 CD1EP15812 388 aa12.51□□□□□ -0.41
USP30-201ENST00000257548 HMGCS2P54868 508 aa12.51□□□□□ -0.41
USP30-201ENST00000257548 SCIMPQ6UWF3 145 aa12.51□□□□□ -0.41
USP30-201ENST00000257548 KCTD8Q6ZWB6 473 aa12.51□□□□□ -0.41
USP30-201ENST00000257548 SLC4A11Q8NBS3 891 aa12.51□□□□□ -0.41
USP30-201ENST00000257548 PRDM12Q9H4Q4 367 aa12.51□□□□□ -0.41
USP30-201ENST00000257548 SACM1LQ9NTJ5 587 aa12.51□□□□□ -0.41
USP30-201ENST00000257548 HSFX1Q9UBD0 423 aa12.51□□□□□ -0.41
USP30-201ENST00000257548 B4GALT5O43286 388 aa12.51□□□□□ -0.41
USP30-201ENST00000257548 DEAF1O75398 565 aaPredicted RBP12.51□□□□□ -0.41
USP30-201ENST00000257548 GNAO1P09471 354 aa12.51□□□□□ -0.41
USP30-201ENST00000257548 PGAM1P18669 254 aa12.51□□□□□ -0.41
USP30-201ENST00000257548 ZNF143P52747 638 aaPredicted RBP12.51□□□□□ -0.41
USP30-201ENST00000257548 SLC25A11Q02978 314 aaKnown RBP12.51□□□□□ -0.41
USP30-201ENST00000257548 KCNJ11Q14654 390 aa12.51□□□□□ -0.41
USP30-201ENST00000257548 PAGE2BQ5JRK9 111 aa12.51□□□□□ -0.41
USP30-201ENST00000257548 XYLT1Q86Y38 959 aa12.51□□□□□ -0.41
USP30-201ENST00000257548 PGAM4Q8N0Y7 254 aa12.51□□□□□ -0.41
USP30-201ENST00000257548 PSMA8Q8TAA3 256 aa12.51□□□□□ -0.41
USP30-201ENST00000257548 CRYGNQ8WXF5 182 aa12.51□□□□□ -0.41
USP30-201ENST00000257548 ISOC1Q96CN7 298 aa12.51□□□□□ -0.41
USP30-201ENST00000257548 CDHR1Q96JP9 859 aa12.51□□□□□ -0.41
USP30-201ENST00000257548 FAM49AQ9H0Q0 323 aaPredicted RBP12.51□□□□□ -0.41
USP30-201ENST00000257548 POMKQ9H5K3 350 aa12.51□□□□□ -0.41
USP30-201ENST00000257548 PXMP2Q9NR77 195 aa12.51□□□□□ -0.41
USP30-201ENST00000257548 CHRAC1Q9NRG0 131 aa12.51□□□□□ -0.41
USP30-201ENST00000257548 FETUBQ9UGM5 382 aa12.51□□□□□ -0.41
USP30-201ENST00000257548 MFHAS1Q9Y4C4 1052 aa12.51□□□□□ -0.41
USP30-201ENST00000257548 PCDHGA4Q9Y5G9 962 aa12.51□□□□□ -0.41
USP30-201ENST00000257548 SH3PXD2BA1X283 911 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms