RNA–Protein interactions for RNA: ENST00000254941.6

NIP7-202, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

TSL 1 (best) BASIC

Gene NIP7, Length 1,887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-202ENST00000254941 XAB2Q9HCS7 855 aaKnown RBP9.65□□□□□ -0.86
NIP7-202ENST00000254941 MED4Q9NPJ6 270 aa9.65□□□□□ -0.86
NIP7-202ENST00000254941 NINJ2Q9NZG7 142 aa9.65□□□□□ -0.86
NIP7-202ENST00000254941 RSPH14Q9UHP6 348 aa9.65□□□□□ -0.86
NIP7-202ENST00000254941 UNC80Q8N2C7 3258 aa9.65□□□□□ -0.87
NIP7-202ENST00000254941 BPTFQ12830 3046 aa9.64□□□□□ -0.87
NIP7-202ENST00000254941 TBL1XO60907 577 aa9.64□□□□□ -0.87
NIP7-202ENST00000254941 ACSL3O95573 720 aa9.64□□□□□ -0.87
NIP7-202ENST00000254941 AP2A1O95782 977 aa9.64□□□□□ -0.87
NIP7-202ENST00000254941 GLP2RO95838 553 aa9.64□□□□□ -0.87
NIP7-202ENST00000254941 SYF2O95926 243 aaKnown RBP9.64□□□□□ -0.87
NIP7-202ENST00000254941 RHOCP08134 193 aa9.64□□□□□ -0.87
NIP7-202ENST00000254941 MLNP12872 115 aa9.64□□□□□ -0.87
NIP7-202ENST00000254941 HOXD9P28356 352 aaPredicted RBP9.64□□□□□ -0.87
NIP7-202ENST00000254941 ETFBP38117 255 aa9.64□□□□□ -0.87
NIP7-202ENST00000254941 LMAN1P49257 510 aa9.64□□□□□ -0.87
NIP7-202ENST00000254941 FAM193AP78312 1265 aa9.64□□□□□ -0.87
NIP7-202ENST00000254941 MPPE1Q53F39 396 aa9.64□□□□□ -0.87
NIP7-202ENST00000254941 MARC1Q5VT66 337 aa9.64□□□□□ -0.87
NIP7-202ENST00000254941 RNF43Q68DV7 783 aa9.64□□□□□ -0.87
NIP7-202ENST00000254941 ZNF354CQ86Y25 554 aa9.64□□□□□ -0.87
NIP7-202ENST00000254941 TEX26Q8N6G2 289 aa9.64□□□□□ -0.87
NIP7-202ENST00000254941 TDRD5Q8NAT2 981 aaKnown RBP9.64□□□□□ -0.87
NIP7-202ENST00000254941 TTC16Q8NEE8 873 aa9.64□□□□□ -0.87
NIP7-202ENST00000254941 OR2W6PQ8NHA6 318 aa9.64□□□□□ -0.87
NIP7-202ENST00000254941 RIN3Q8TB24 985 aa9.64□□□□□ -0.87
NIP7-202ENST00000254941 ITFG1Q8TB96 612 aa9.64□□□□□ -0.87
NIP7-202ENST00000254941 USP33Q8TEY7 942 aa9.64□□□□□ -0.87
NIP7-202ENST00000254941 ZNF599Q96NL3 588 aa9.64□□□□□ -0.87
NIP7-202ENST00000254941 PPP1R2P1Q96PQ5 205 aa9.64□□□□□ -0.87
NIP7-202ENST00000254941 ACE2Q9BYF1 805 aaPredicted RBP9.64□□□□□ -0.87
NIP7-202ENST00000254941 NSUN3Q9H649 340 aaKnown RBP9.64□□□□□ -0.87
NIP7-202ENST00000254941 PDFQ9HBH1 243 aa9.64□□□□□ -0.87
NIP7-202ENST00000254941 RBM22Q9NW64 420 aaKnown RBP eCLIP9.64□□□□□ -0.87
NIP7-202ENST00000254941 TEX264Q9Y6I9 313 aa9.64□□□□□ -0.87
NIP7-202ENST00000254941 TRIOBPQ9H2D6 2365 aa9.64□□□□□ -0.87
NIP7-202ENST00000254941 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.64□□□□□ -0.87
NIP7-202ENST00000254941 F5H423 210 aaPredicted RBP9.64□□□□□ -0.87
NIP7-202ENST00000254941 KDELR3O43731 214 aa9.64□□□□□ -0.87
NIP7-202ENST00000254941 OPA1O60313 960 aa9.64□□□□□ -0.87
NIP7-202ENST00000254941 AVILO75366 819 aa9.64□□□□□ -0.87
NIP7-202ENST00000254941 BANF1O75531 89 aa9.64□□□□□ -0.87
NIP7-202ENST00000254941 SUN1O94901 812 aa9.64□□□□□ -0.87
NIP7-202ENST00000254941 LUC7L3O95232 432 aaKnown RBP9.64□□□□□ -0.87
NIP7-202ENST00000254941 PRAMEF12O95522 483 aa9.64□□□□□ -0.87
NIP7-202ENST00000254941 SHBGP04278 402 aa9.64□□□□□ -0.87
NIP7-202ENST00000254941 HLA-DQB2P05538 268 aa9.64□□□□□ -0.87
NIP7-202ENST00000254941 ABHD2P08910 425 aa9.64□□□□□ -0.87
NIP7-202ENST00000254941 WEE1P30291 646 aa9.64□□□□□ -0.87
NIP7-202ENST00000254941 GRIA1P42261 906 aa9.64□□□□□ -0.87
NIP7-202ENST00000254941 ZNF844Q08AG5 666 aa9.64□□□□□ -0.87
NIP7-202ENST00000254941 SLC10A7Q0GE19 358 aa9.64□□□□□ -0.87
NIP7-202ENST00000254941 HYAL1Q12794 435 aa9.64□□□□□ -0.87
NIP7-202ENST00000254941 PRPSAP1Q14558 356 aa9.64□□□□□ -0.87
NIP7-202ENST00000254941 CBX2Q14781 532 aaPredicted RBP9.64□□□□□ -0.87
NIP7-202ENST00000254941 ZNF77Q15935 545 aa9.64□□□□□ -0.87
NIP7-202ENST00000254941 BBS9Q3SYG4 887 aa9.64□□□□□ -0.87
NIP7-202ENST00000254941 CCDC38Q502W7 563 aa9.64□□□□□ -0.87
NIP7-202ENST00000254941 HSP90B2PQ58FF3 399 aa9.64□□□□□ -0.87
NIP7-202ENST00000254941 HP1BP3Q5SSJ5 553 aaPredicted RBP9.64□□□□□ -0.87
NIP7-202ENST00000254941 IL31Q6EBC2 164 aa9.64□□□□□ -0.87
NIP7-202ENST00000254941 OTOP3Q7RTS5 596 aa9.64□□□□□ -0.87
NIP7-202ENST00000254941 ARID3BQ8IVW6 561 aaPredicted RBP9.64□□□□□ -0.87
NIP7-202ENST00000254941 AGGF1Q8N302 714 aaeCLIP9.64□□□□□ -0.87
NIP7-202ENST00000254941 OR7D4Q8NG98 312 aa9.64□□□□□ -0.87
NIP7-202ENST00000254941 PYROXD1Q8WU10 500 aa9.64□□□□□ -0.87
NIP7-202ENST00000254941 NSMCE1Q8WV22 266 aa9.64□□□□□ -0.87
NIP7-202ENST00000254941 ING5Q8WYH8 240 aa9.64□□□□□ -0.87
NIP7-202ENST00000254941 ZBTB9Q96C00 473 aa9.64□□□□□ -0.87
NIP7-202ENST00000254941 LRRC39Q96DD0 335 aa9.64□□□□□ -0.87
NIP7-202ENST00000254941 PABPC5Q96DU9 382 aaKnown RBP9.64□□□□□ -0.87
NIP7-202ENST00000254941 PKNOX2Q96KN3 472 aa9.64□□□□□ -0.87
NIP7-202ENST00000254941 FCRL5Q96RD9 977 aa9.64□□□□□ -0.87
NIP7-202ENST00000254941 WDR83Q9BRX9 315 aaKnown RBP9.64□□□□□ -0.87
NIP7-202ENST00000254941 IGFLR1Q9H665 355 aa9.64□□□□□ -0.87
NIP7-202ENST00000254941 GLOD4Q9HC38 313 aa9.64□□□□□ -0.87
NIP7-202ENST00000254941 LRRC4CQ9HCJ2 640 aa9.64□□□□□ -0.87
NIP7-202ENST00000254941 OGFRQ9NZT2 677 aa9.64□□□□□ -0.87
NIP7-202ENST00000254941 AAR2Q9Y312 384 aaKnown RBP9.64□□□□□ -0.87
NIP7-202ENST00000254941 PRUNE2Q8WUY3 3088 aa9.63□□□□□ -0.87
NIP7-202ENST00000254941 MYLKQ15746 1914 aa9.63□□□□□ -0.87
NIP7-202ENST00000254941 GOLGA6CA6NDK9 693 aa9.63□□□□□ -0.87
NIP7-202ENST00000254941 H0Y626 953 aa9.63□□□□□ -0.87
NIP7-202ENST00000254941 H3BQF6 201 aa9.63□□□□□ -0.87
NIP7-202ENST00000254941 PSMD3O43242 534 aa9.63□□□□□ -0.87
NIP7-202ENST00000254941 ANXA9O76027 345 aa9.63□□□□□ -0.87
NIP7-202ENST00000254941 NEBLO76041 1014 aa9.63□□□□□ -0.87
NIP7-202ENST00000254941 GOLGA6DP0CG33 693 aa9.63□□□□□ -0.87
NIP7-202ENST00000254941 MMP13P45452 471 aa9.63□□□□□ -0.87
NIP7-202ENST00000254941 IFFO1Q0D2I5 559 aa9.63□□□□□ -0.87
NIP7-202ENST00000254941 USP4Q13107 963 aa9.63□□□□□ -0.87
NIP7-202ENST00000254941 MTM1Q13496 603 aa9.63□□□□□ -0.87
NIP7-202ENST00000254941 CDH18Q13634 790 aa9.63□□□□□ -0.87
NIP7-202ENST00000254941 FSCBQ5H9T9 825 aa9.63□□□□□ -0.87
NIP7-202ENST00000254941 CEP85LQ5SZL2 805 aa9.63□□□□□ -0.87
NIP7-202ENST00000254941 TMCO4Q5TGY1 634 aa9.63□□□□□ -0.87
NIP7-202ENST00000254941 LRRC8BQ6P9F7 803 aa9.63□□□□□ -0.87
NIP7-202ENST00000254941 GPR149Q86SP6 731 aa9.63□□□□□ -0.87
NIP7-202ENST00000254941 ANKMY2Q8IV38 441 aa9.63□□□□□ -0.87
NIP7-202ENST00000254941 KRT222Q8N1A0 295 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms