RNA–Protein interactions for RNA: ENST00000252108.7

UBE4A-201, Transcript of ubiquitination factor E4A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE4A, Length 6,103 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-201ENST00000252108 HOXC13P31276 330 aa4.22□□□□□ -1.73
UBE4A-201ENST00000252108 ABL2P42684 1182 aa4.22□□□□□ -1.73
UBE4A-201ENST00000252108 STAT5BP51692 787 aa4.22□□□□□ -1.73
UBE4A-201ENST00000252108 AIF1P55008 147 aa4.22□□□□□ -1.73
UBE4A-201ENST00000252108 GJA9P57773 515 aa4.22□□□□□ -1.73
UBE4A-201ENST00000252108 PTPN11Q06124 597 aaPredicted RBP4.22□□□□□ -1.73
UBE4A-201ENST00000252108 DMWDQ09019 674 aa4.22□□□□□ -1.73
UBE4A-201ENST00000252108 SCAPQ12770 1279 aa4.22□□□□□ -1.73
UBE4A-201ENST00000252108 TRAP1Q12931 704 aaKnown RBP4.22□□□□□ -1.73
UBE4A-201ENST00000252108 SEZ6Q53EL9 994 aa4.22□□□□□ -1.73
UBE4A-201ENST00000252108 MORN1Q5T089 497 aa4.22□□□□□ -1.73
UBE4A-201ENST00000252108 N4BP2L1Q5TBK1 243 aaPredicted RBP4.22□□□□□ -1.73
UBE4A-201ENST00000252108 FAXCQ5TGI0 409 aa4.22□□□□□ -1.73
UBE4A-201ENST00000252108 AFMIDQ63HM1 303 aa4.22□□□□□ -1.73
UBE4A-201ENST00000252108 OR52E8Q6IFG1 317 aa4.22□□□□□ -1.73
UBE4A-201ENST00000252108 NCAPG2Q86XI2 1143 aa4.22□□□□□ -1.73
UBE4A-201ENST00000252108 ERI1Q8IV48 349 aaKnown RBP4.22□□□□□ -1.73
UBE4A-201ENST00000252108 NUP93Q8N1F7 819 aa4.22□□□□□ -1.73
UBE4A-201ENST00000252108 GOLM1Q8NBJ4 401 aa4.22□□□□□ -1.73
UBE4A-201ENST00000252108 PRR11Q96HE9 360 aaPredicted RBP4.22□□□□□ -1.73
UBE4A-201ENST00000252108 UBE2OQ9C0C9 1292 aaKnown RBP4.22□□□□□ -1.73
UBE4A-201ENST00000252108 PDGFCQ9NRA1 345 aa4.22□□□□□ -1.73
UBE4A-201ENST00000252108 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.22□□□□□ -1.73
UBE4A-201ENST00000252108 UTP6Q9NYH9 597 aaKnown RBP4.22□□□□□ -1.73
UBE4A-201ENST00000252108 SH3GLB1Q9Y371 365 aa4.22□□□□□ -1.73
UBE4A-201ENST00000252108 NRCAMQ92823 1304 aa4.22□□□□□ -1.73
UBE4A-201ENST00000252108 ZNF701M0R085 212 aaPredicted RBP4.22□□□□□ -1.73
UBE4A-201ENST00000252108 SPTLC1O15269 473 aa4.22□□□□□ -1.73
UBE4A-201ENST00000252108 PAPSS1O43252 624 aaPredicted RBP4.22□□□□□ -1.73
UBE4A-201ENST00000252108 AP1G1O43747 822 aa4.22□□□□□ -1.73
UBE4A-201ENST00000252108 GCATO75600 419 aa4.22□□□□□ -1.73
UBE4A-201ENST00000252108 CABYRO75952 493 aa4.22□□□□□ -1.73
UBE4A-201ENST00000252108 DDHD2O94830 711 aa4.22□□□□□ -1.73
UBE4A-201ENST00000252108 ITGA2BP08514 1039 aa4.22□□□□□ -1.73
UBE4A-201ENST00000252108 PMLP29590 882 aa4.22□□□□□ -1.73
UBE4A-201ENST00000252108 BNIP2Q12982 314 aa4.22□□□□□ -1.73
UBE4A-201ENST00000252108 TOP3AQ13472 1001 aaPredicted RBP4.22□□□□□ -1.73
UBE4A-201ENST00000252108 CA9Q16790 459 aa4.22□□□□□ -1.73
UBE4A-201ENST00000252108 PRAMEF18Q5VWM3 479 aa4.22□□□□□ -1.73
UBE4A-201ENST00000252108 TTC30BQ8N4P2 665 aa4.22□□□□□ -1.73
UBE4A-201ENST00000252108 BEST2Q8NFU1 509 aa4.22□□□□□ -1.73
UBE4A-201ENST00000252108 SLC10A4Q96EP9 437 aa4.22□□□□□ -1.73
UBE4A-201ENST00000252108 C1orf50Q9BV19 199 aa4.22□□□□□ -1.73
UBE4A-201ENST00000252108 SLC25A23Q9BV35 468 aa4.22□□□□□ -1.73
UBE4A-201ENST00000252108 KLHL11Q9NVR0 708 aa4.22□□□□□ -1.73
UBE4A-201ENST00000252108 COPG2Q9UBF2 871 aa4.22□□□□□ -1.73
UBE4A-201ENST00000252108 CDH22Q9UJ99 828 aa4.22□□□□□ -1.73
UBE4A-201ENST00000252108 VPS28Q9UK41 221 aa4.22□□□□□ -1.73
UBE4A-201ENST00000252108 SLC15A5A6NIM6 579 aa4.22□□□□□ -1.73
UBE4A-201ENST00000252108 ZNF839A8K0R7 811 aa4.22□□□□□ -1.73
UBE4A-201ENST00000252108 LACTBL1A8MY62 500 aa4.22□□□□□ -1.73
UBE4A-201ENST00000252108 HDAC3O15379 428 aa4.22□□□□□ -1.73
UBE4A-201ENST00000252108 BANF1O75531 89 aa4.22□□□□□ -1.73
UBE4A-201ENST00000252108 ZBTB7AO95365 584 aa4.22□□□□□ -1.73
UBE4A-201ENST00000252108 SLC25A27O95847 323 aa4.22□□□□□ -1.73
UBE4A-201ENST00000252108 STMN1P16949 149 aa4.22□□□□□ -1.73
UBE4A-201ENST00000252108 IGFBP6P24592 240 aaPredicted RBP4.22□□□□□ -1.73
UBE4A-201ENST00000252108 CCNA1P78396 465 aa4.22□□□□□ -1.73
UBE4A-201ENST00000252108 SEMA5AQ13591 1074 aa4.22□□□□□ -1.73
UBE4A-201ENST00000252108 RFTN1Q14699 578 aaPredicted RBP4.22□□□□□ -1.73
UBE4A-201ENST00000252108 PSMD5Q16401 504 aa4.22□□□□□ -1.73
UBE4A-201ENST00000252108 MROH9Q5TGP6 573 aa4.22□□□□□ -1.73
UBE4A-201ENST00000252108 CAMK1DQ8IU85 385 aa4.22□□□□□ -1.73
UBE4A-201ENST00000252108 CRIPAKQ8N1N5 446 aa4.22□□□□□ -1.73
UBE4A-201ENST00000252108 TDRD5Q8NAT2 981 aaKnown RBP4.22□□□□□ -1.73
UBE4A-201ENST00000252108 TSPAN14Q8NG11 270 aa4.22□□□□□ -1.73
UBE4A-201ENST00000252108 RNF217Q8TC41 542 aa4.22□□□□□ -1.73
UBE4A-201ENST00000252108 NCSTNQ92542 709 aa4.22□□□□□ -1.73
UBE4A-201ENST00000252108 ITPKCQ96DU7 683 aa4.22□□□□□ -1.73
UBE4A-201ENST00000252108 TMEM176AQ96HP8 235 aa4.22□□□□□ -1.73
UBE4A-201ENST00000252108 TNIP3Q96KP6 325 aa4.22□□□□□ -1.73
UBE4A-201ENST00000252108 BIRC8Q96P09 236 aa4.22□□□□□ -1.73
UBE4A-201ENST00000252108 CDH19Q9H159 772 aa4.22□□□□□ -1.73
UBE4A-201ENST00000252108 ZNF696Q9H7X3 374 aa4.22□□□□□ -1.73
UBE4A-201ENST00000252108 LRRC4Q9HBW1 653 aa4.22□□□□□ -1.73
UBE4A-201ENST00000252108 NCKIPSDQ9NZQ3 722 aa4.22□□□□□ -1.73
UBE4A-201ENST00000252108 SLC17A7Q9P2U7 560 aa4.22□□□□□ -1.73
UBE4A-201ENST00000252108 PCDHB12Q9Y5F1 795 aa4.22□□□□□ -1.73
UBE4A-201ENST00000252108 HELZP42694 1942 aaKnown RBP4.22□□□□□ -1.73
UBE4A-201ENST00000252108 ATG2AQ2TAZ0 1938 aa4.22□□□□□ -1.73
UBE4A-201ENST00000252108 RNF103-CHMP3A0A140T963 221 aa4.22□□□□□ -1.73
UBE4A-201ENST00000252108 MATN2O00339 956 aa4.22□□□□□ -1.73
UBE4A-201ENST00000252108 MICAL2O94851 1124 aa4.22□□□□□ -1.73
UBE4A-201ENST00000252108 F2P00734 622 aa4.22□□□□□ -1.73
UBE4A-201ENST00000252108 RBP1P09455 135 aa4.22□□□□□ -1.73
UBE4A-201ENST00000252108 ALOX5P09917 674 aa4.22□□□□□ -1.73
UBE4A-201ENST00000252108 PSMA4P25789 261 aaKnown RBP4.22□□□□□ -1.73
UBE4A-201ENST00000252108 MIPP30301 263 aa4.22□□□□□ -1.73
UBE4A-201ENST00000252108 ADGRE1Q14246 886 aa4.22□□□□□ -1.73
UBE4A-201ENST00000252108 PTK2BQ14289 1009 aa4.22□□□□□ -1.73
UBE4A-201ENST00000252108 PPP1R26Q5T8A7 1209 aaPredicted RBP4.22□□□□□ -1.73
UBE4A-201ENST00000252108 MANEALQ5VSG8 457 aa4.22□□□□□ -1.73
UBE4A-201ENST00000252108 OLFML2BQ68BL8 750 aa4.22□□□□□ -1.73
UBE4A-201ENST00000252108 JADE1Q6IE81 842 aa4.22□□□□□ -1.73
UBE4A-201ENST00000252108 TTC33Q6PID6 262 aaPredicted RBP4.22□□□□□ -1.73
UBE4A-201ENST00000252108 DPH6Q7L8W6 267 aa4.22□□□□□ -1.73
UBE4A-201ENST00000252108 ZNF683Q8IZ20 524 aa4.22□□□□□ -1.73
UBE4A-201ENST00000252108 SIX6OS1Q8N1H7 587 aa4.22□□□□□ -1.73
UBE4A-201ENST00000252108 AADATQ8N5Z0 425 aa4.22□□□□□ -1.73
UBE4A-201ENST00000252108 SERBP1Q8NC51 408 aaKnown RBP eCLIP4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms