RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 MIB1Q86YT6 1006 aa16.04■□□□□ 0.16
LRFN1-201ENST00000248668 ITFG2Q969R8 447 aa16.04■□□□□ 0.16
LRFN1-201ENST00000248668 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.04■□□□□ 0.16
LRFN1-201ENST00000248668 THAP1Q9NVV9 213 aa16.04■□□□□ 0.16
LRFN1-201ENST00000248668 KCNK4Q9NYG8 393 aa16.04■□□□□ 0.16
LRFN1-201ENST00000248668 TAS2R1Q9NYW7 299 aa16.04■□□□□ 0.16
LRFN1-201ENST00000248668 TDRD15B5MCY1 1934 aaKnown RBP16.04■□□□□ 0.16
LRFN1-201ENST00000248668 PRR5-ARHGAP8B1AHC4 643 aa16.04■□□□□ 0.16
LRFN1-201ENST00000248668 CCDC22O60826 627 aa16.04■□□□□ 0.16
LRFN1-201ENST00000248668 PROCP04070 461 aa16.04■□□□□ 0.16
LRFN1-201ENST00000248668 LINGO3P0C6S8 592 aa16.04■□□□□ 0.16
LRFN1-201ENST00000248668 SPRP35270 261 aaPredicted RBP16.04■□□□□ 0.16
LRFN1-201ENST00000248668 GATMP50440 423 aa16.04■□□□□ 0.16
LRFN1-201ENST00000248668 MAXP61244 160 aa16.04■□□□□ 0.16
LRFN1-201ENST00000248668 ARHGAP8P85298 464 aa16.04■□□□□ 0.16
LRFN1-201ENST00000248668 CTBP1Q13363 440 aa16.04■□□□□ 0.16
LRFN1-201ENST00000248668 PRPSAP1Q14558 356 aa16.04■□□□□ 0.16
LRFN1-201ENST00000248668 MBTPS1Q14703 1052 aa16.04■□□□□ 0.16
LRFN1-201ENST00000248668 CYS1Q717R9 158 aa16.04■□□□□ 0.16
LRFN1-201ENST00000248668 ZSCAN18Q8TBC5 510 aaPredicted RBP16.04■□□□□ 0.16
LRFN1-201ENST00000248668 BTBD10Q9BSF8 475 aa16.04■□□□□ 0.16
LRFN1-201ENST00000248668 PRDM16Q9HAZ2 1276 aa16.04■□□□□ 0.16
LRFN1-201ENST00000248668 TMEM165Q9HC07 324 aa16.04■□□□□ 0.16
LRFN1-201ENST00000248668 BATF3Q9NR55 127 aa16.04■□□□□ 0.16
LRFN1-201ENST00000248668 SLC2A6Q9UGQ3 507 aa16.04■□□□□ 0.16
LRFN1-201ENST00000248668 TRHDEQ9UKU6 1024 aa16.04■□□□□ 0.16
LRFN1-201ENST00000248668 NEU3Q9UQ49 428 aa16.04■□□□□ 0.16
LRFN1-201ENST00000248668 B2RBV5 119 aa16.04■□□□□ 0.16
LRFN1-201ENST00000248668 CCND1P24385 295 aa16.04■□□□□ 0.16
LRFN1-201ENST00000248668 DENND6AQ8IWF6 608 aa16.04■□□□□ 0.16
LRFN1-201ENST00000248668 SLC25A41Q8N5S1 370 aa16.04■□□□□ 0.16
LRFN1-201ENST00000248668 POU5F2Q8N7G0 328 aa16.04■□□□□ 0.16
LRFN1-201ENST00000248668 IRGQQ8WZA9 623 aa16.04■□□□□ 0.16
LRFN1-201ENST00000248668 FTHL17Q9BXU8 183 aa16.04■□□□□ 0.16
LRFN1-201ENST00000248668 WWP1Q9H0M0 922 aa16.04■□□□□ 0.16
LRFN1-201ENST00000248668 ABCC13Q9NSE7 274 aa16.04■□□□□ 0.16
LRFN1-201ENST00000248668 RBM22Q9NW64 420 aaKnown RBP eCLIP16.04■□□□□ 0.16
LRFN1-201ENST00000248668 DCDC2Q9UHG0 476 aa16.04■□□□□ 0.16
LRFN1-201ENST00000248668 SLC27A5Q9Y2P5 690 aa16.04■□□□□ 0.16
LRFN1-201ENST00000248668 MAP3K13O43283 966 aa16.03■□□□□ 0.16
LRFN1-201ENST00000248668 AOC2O75106 756 aa16.03■□□□□ 0.16
LRFN1-201ENST00000248668 PEX11AO75192 247 aa16.03■□□□□ 0.16
LRFN1-201ENST00000248668 VAPBO95292 243 aa16.03■□□□□ 0.16
LRFN1-201ENST00000248668 ITKQ08881 620 aa16.03■□□□□ 0.16
LRFN1-201ENST00000248668 EFEMP1Q12805 493 aa16.03■□□□□ 0.16
LRFN1-201ENST00000248668 CDH17Q12864 832 aa16.03■□□□□ 0.16
LRFN1-201ENST00000248668 GRTP1Q5TC63 336 aa16.03■□□□□ 0.16
LRFN1-201ENST00000248668 APBB2Q92870 758 aa16.03■□□□□ 0.16
LRFN1-201ENST00000248668 VPS39Q96JC1 886 aa16.03■□□□□ 0.16
LRFN1-201ENST00000248668 CLPTM1LQ96KA5 538 aa16.03■□□□□ 0.16
LRFN1-201ENST00000248668 NOP53Q9NZM5 478 aaKnown RBP16.03■□□□□ 0.16
LRFN1-201ENST00000248668 COPG2Q9UBF2 871 aa16.03■□□□□ 0.16
LRFN1-201ENST00000248668 DSEQ9UL01 958 aa16.03■□□□□ 0.16
LRFN1-201ENST00000248668 HS3ST4Q9Y661 456 aa16.03■□□□□ 0.16
LRFN1-201ENST00000248668 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.03■□□□□ 0.16
LRFN1-201ENST00000248668 USP1O94782 785 aa16.03■□□□□ 0.16
LRFN1-201ENST00000248668 HLA-DQB2P05538 268 aa16.03■□□□□ 0.16
LRFN1-201ENST00000248668 C2P06681 752 aa16.03■□□□□ 0.16
LRFN1-201ENST00000248668 CKBP12277 381 aa16.03■□□□□ 0.16
LRFN1-201ENST00000248668 ABL2P42684 1182 aa16.03■□□□□ 0.16
LRFN1-201ENST00000248668 CCR10P46092 362 aa16.03■□□□□ 0.16
LRFN1-201ENST00000248668 LIMK2P53671 638 aa16.03■□□□□ 0.16
LRFN1-201ENST00000248668 MXRA7P84157 204 aa16.03■□□□□ 0.16
LRFN1-201ENST00000248668 GRM3Q14832 879 aa16.03■□□□□ 0.16
LRFN1-201ENST00000248668 ZNF598Q86UK7 904 aaKnown RBP16.03■□□□□ 0.16
LRFN1-201ENST00000248668 KLHDC9Q8NEP7 349 aa16.03■□□□□ 0.16
LRFN1-201ENST00000248668 KLHL5Q96PQ7 755 aa16.03■□□□□ 0.16
LRFN1-201ENST00000248668 NT5C1B-RDH14C9J2C7 533 aa16.03■□□□□ 0.16
LRFN1-201ENST00000248668 TNFRSF10BO14763 440 aa16.03■□□□□ 0.16
LRFN1-201ENST00000248668 BIRC5O15392 142 aa16.03■□□□□ 0.16
LRFN1-201ENST00000248668 GSC2O15499 205 aa16.03■□□□□ 0.16
LRFN1-201ENST00000248668 MTSS1O43312 755 aa16.03■□□□□ 0.16
LRFN1-201ENST00000248668 RALBP11234 206 aa16.03■□□□□ 0.16
LRFN1-201ENST00000248668 CPA3P15088 417 aa16.03■□□□□ 0.16
LRFN1-201ENST00000248668 MPP1Q00013 466 aa16.03■□□□□ 0.16
LRFN1-201ENST00000248668 ESRP1Q6NXG1 681 aaKnown RBP16.03■□□□□ 0.16
LRFN1-201ENST00000248668 C4orf50Q6ZRC1 276 aa16.03■□□□□ 0.16
LRFN1-201ENST00000248668 CIR1Q86X95 450 aaPredicted RBP16.03■□□□□ 0.16
LRFN1-201ENST00000248668 PIDD1Q9HB75 910 aa16.03■□□□□ 0.16
LRFN1-201ENST00000248668 MAN1C1Q9NR34 630 aa16.03■□□□□ 0.16
LRFN1-201ENST00000248668 GMIPQ9P107 970 aa16.03■□□□□ 0.16
LRFN1-201ENST00000248668 E9PAM4 449 aa16.02■□□□□ 0.16
LRFN1-201ENST00000248668 MAFKO60675 156 aa16.02■□□□□ 0.16
LRFN1-201ENST00000248668 ACLYP53396 1101 aa16.02■□□□□ 0.16
LRFN1-201ENST00000248668 KPNB1Q14974 876 aaKnown RBP16.02■□□□□ 0.16
LRFN1-201ENST00000248668 CCSAPQ6IQ19 270 aaPredicted RBP16.02■□□□□ 0.16
LRFN1-201ENST00000248668 NAPEPLDQ6IQ20 393 aa16.02■□□□□ 0.16
LRFN1-201ENST00000248668 PIWIL2Q8TC59 973 aaKnown RBP16.02■□□□□ 0.16
LRFN1-201ENST00000248668 URGCPQ8TCY9 931 aa16.02■□□□□ 0.16
LRFN1-201ENST00000248668 ACMSDQ8TDX5 336 aa16.02■□□□□ 0.16
LRFN1-201ENST00000248668 LINC01599Q8WXQ3 324 aa16.02■□□□□ 0.16
LRFN1-201ENST00000248668 TK2O00142 265 aa16.02■□□□□ 0.15
LRFN1-201ENST00000248668 CALB2P22676 271 aa16.02■□□□□ 0.15
LRFN1-201ENST00000248668 SERPINB8P50452 374 aa16.02■□□□□ 0.15
LRFN1-201ENST00000248668 PAPOLAP51003 745 aaKnown RBP16.02■□□□□ 0.15
LRFN1-201ENST00000248668 MAPRE1Q15691 268 aaKnown RBP16.02■□□□□ 0.15
LRFN1-201ENST00000248668 KHDC1Q4VXA5 237 aaKnown RBP16.02■□□□□ 0.15
LRFN1-201ENST00000248668 NAPRTQ6XQN6 538 aa16.02■□□□□ 0.15
LRFN1-201ENST00000248668 WDR75Q8IWA0 830 aaKnown RBP16.02■□□□□ 0.15
LRFN1-201ENST00000248668 TEX9Q8N6V9 391 aa16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms