RNA–Protein interactions for RNA: ENST00000248121.6

SYNGR3-201, Transcript of synaptogyrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNGR3, Length 2,051 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-201ENST00000248121 TCP10LQ8TDR4 215 aa23.81■■□□□ 1.4
SYNGR3-201ENST00000248121 SLC22A17Q8WUG5 538 aa23.81■■□□□ 1.4
SYNGR3-201ENST00000248121 WBP2Q969T9 261 aa23.81■■□□□ 1.4
SYNGR3-201ENST00000248121 ELAC2Q9BQ52 826 aaKnown RBP23.81■■□□□ 1.4
SYNGR3-201ENST00000248121 IL21Q9HBE4 155 aa23.81■■□□□ 1.4
SYNGR3-201ENST00000248121 UBP1Q9NZI7 540 aa23.81■■□□□ 1.4
SYNGR3-201ENST00000248121 SLC17A6Q9P2U8 582 aa23.81■■□□□ 1.4
SYNGR3-201ENST00000248121 LZTS1Q9Y250 596 aa23.81■■□□□ 1.4
SYNGR3-201ENST00000248121 IRAK3Q9Y616 596 aa23.81■■□□□ 1.4
SYNGR3-201ENST00000248121 ERI2A8K979 691 aaKnown RBP23.8■■□□□ 1.4
SYNGR3-201ENST00000248121 TRIM49D1C9J1S8 452 aa23.8■■□□□ 1.4
SYNGR3-201ENST00000248121 CNTN5O94779 1100 aa23.8■■□□□ 1.4
SYNGR3-201ENST00000248121 ADH1AP07327 375 aa23.8■■□□□ 1.4
SYNGR3-201ENST00000248121 C8AP07357 584 aa23.8■■□□□ 1.4
SYNGR3-201ENST00000248121 EPHB3P54753 998 aa23.8■■□□□ 1.4
SYNGR3-201ENST00000248121 NIPAL4Q0D2K0 466 aa23.8■■□□□ 1.4
SYNGR3-201ENST00000248121 ALFQ53S48 1182 aa23.8■■□□□ 1.4
SYNGR3-201ENST00000248121 SPATS2Q86XZ4 545 aaKnown RBP23.8■■□□□ 1.4
SYNGR3-201ENST00000248121 ALKBH8Q96BT7 664 aaKnown RBP23.8■■□□□ 1.4
SYNGR3-201ENST00000248121 SLC22A12Q96S37 553 aa23.8■■□□□ 1.4
SYNGR3-201ENST00000248121 STK39Q9UEW8 545 aa23.8■■□□□ 1.4
SYNGR3-201ENST00000248121 IGLV3-10A0A075B6K4 115 aa23.8■■□□□ 1.4
SYNGR3-201ENST00000248121 GOLGA6L7A0A1B0GV03 622 aa23.8■■□□□ 1.4
SYNGR3-201ENST00000248121 C5orf67F2Z3F1 127 aa23.8■■□□□ 1.4
SYNGR3-201ENST00000248121 MATN3O15232 486 aa23.8■■□□□ 1.4
SYNGR3-201ENST00000248121 PAPOLAP51003 745 aaKnown RBP23.8■■□□□ 1.4
SYNGR3-201ENST00000248121 NADSYN1Q6IA69 706 aa23.8■■□□□ 1.4
SYNGR3-201ENST00000248121 LVRNQ6Q4G3 990 aa23.8■■□□□ 1.4
SYNGR3-201ENST00000248121 CES3Q6UWW8 571 aa23.8■■□□□ 1.4
SYNGR3-201ENST00000248121 CCNJLQ8IV13 435 aa23.8■■□□□ 1.4
SYNGR3-201ENST00000248121 KREMEN2Q8NCW0 462 aa23.8■■□□□ 1.4
SYNGR3-201ENST00000248121 PDZD8Q8NEN9 1154 aa23.8■■□□□ 1.4
SYNGR3-201ENST00000248121 OVCA2Q8WZ82 227 aa23.8■■□□□ 1.4
SYNGR3-201ENST00000248121 IGSF8Q969P0 613 aa23.8■■□□□ 1.4
SYNGR3-201ENST00000248121 TTC17Q96AE7 1141 aa23.8■■□□□ 1.4
SYNGR3-201ENST00000248121 BTN2A3PQ96KV6 586 aa23.8■■□□□ 1.4
SYNGR3-201ENST00000248121 APOL2Q9BQE5 337 aa23.8■■□□□ 1.4
SYNGR3-201ENST00000248121 GKN1Q9NS71 199 aa23.8■■□□□ 1.4
SYNGR3-201ENST00000248121 TRPM5Q9NZQ8 1165 aa23.8■■□□□ 1.4
SYNGR3-201ENST00000248121 SLC17A7Q9P2U7 560 aa23.8■■□□□ 1.4
SYNGR3-201ENST00000248121 SSX2IPQ9Y2D8 614 aa23.8■■□□□ 1.4
SYNGR3-201ENST00000248121 TRANK1O15050 2925 aa23.8■■□□□ 1.4
SYNGR3-201ENST00000248121 ZWINTO95229 277 aa23.79■■□□□ 1.4
SYNGR3-201ENST00000248121 PYGBP11216 843 aa23.79■■□□□ 1.4
SYNGR3-201ENST00000248121 ATP5C1P36542 298 aaKnown RBP23.79■■□□□ 1.4
SYNGR3-201ENST00000248121 IFT88Q13099 833 aa23.79■■□□□ 1.4
SYNGR3-201ENST00000248121 BMPR2Q13873 1038 aa23.79■■□□□ 1.4
SYNGR3-201ENST00000248121 HECTD3Q5T447 861 aa23.79■■□□□ 1.4
SYNGR3-201ENST00000248121 RAP1GAP2Q684P5 730 aa23.79■■□□□ 1.4
SYNGR3-201ENST00000248121 TFAP2DQ7Z6R9 452 aa23.79■■□□□ 1.4
SYNGR3-201ENST00000248121 ATP6V0D2Q8N8Y2 350 aa23.79■■□□□ 1.4
SYNGR3-201ENST00000248121 SPOCK2Q92563 424 aa23.79■■□□□ 1.4
SYNGR3-201ENST00000248121 FCRL3Q96P31 734 aaPredicted RBP23.79■■□□□ 1.4
SYNGR3-201ENST00000248121 NAT9Q9BTE0 207 aa23.79■■□□□ 1.4
SYNGR3-201ENST00000248121 PPARGC1AQ9UBK2 798 aaKnown RBP23.79■■□□□ 1.4
SYNGR3-201ENST00000248121 REV3LO60673 3130 aa23.79■■□□□ 1.4
SYNGR3-201ENST00000248121 OAS1P00973 400 aaKnown RBP23.79■■□□□ 1.4
SYNGR3-201ENST00000248121 F11P03951 625 aa23.79■■□□□ 1.4
SYNGR3-201ENST00000248121 SNRPAP09012 282 aaKnown RBP23.79■■□□□ 1.4
SYNGR3-201ENST00000248121 ADRA1DP25100 572 aa23.79■■□□□ 1.4
SYNGR3-201ENST00000248121 GBP2P32456 591 aaPredicted RBP23.79■■□□□ 1.4
SYNGR3-201ENST00000248121 CLCN4P51793 760 aa23.79■■□□□ 1.4
SYNGR3-201ENST00000248121 NEK3P51956 506 aa23.79■■□□□ 1.4
SYNGR3-201ENST00000248121 ZKSCAN8Q15776 578 aaPredicted RBP23.79■■□□□ 1.4
SYNGR3-201ENST00000248121 CGB2Q6NT52 195 aa23.79■■□□□ 1.4
SYNGR3-201ENST00000248121 FBXL22Q6P050 247 aa23.79■■□□□ 1.4
SYNGR3-201ENST00000248121 UMODL1-AS1Q8N2C9 162 aa23.79■■□□□ 1.4
SYNGR3-201ENST00000248121 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP23.79■■□□□ 1.4
SYNGR3-201ENST00000248121 SPATA22Q8NHS9 363 aa23.79■■□□□ 1.4
SYNGR3-201ENST00000248121 MICAL1Q8TDZ2 1067 aa23.79■■□□□ 1.4
SYNGR3-201ENST00000248121 CYP2S1Q96SQ9 504 aa23.79■■□□□ 1.4
SYNGR3-201ENST00000248121 ZNF212Q9UDV6 495 aa23.79■■□□□ 1.4
SYNGR3-201ENST00000248121 DNMT3LQ9UJW3 386 aa23.79■■□□□ 1.4
SYNGR3-201ENST00000248121 ATXN2Q99700 1313 aaKnown RBP23.78■■□□□ 1.4
SYNGR3-201ENST00000248121 SNX3O60493 162 aa23.78■■□□□ 1.4
SYNGR3-201ENST00000248121 KRT37O76014 449 aa23.78■■□□□ 1.4
SYNGR3-201ENST00000248121 RHOQP17081 205 aa23.78■■□□□ 1.4
SYNGR3-201ENST00000248121 GAREM2Q75VX8 874 aa23.78■■□□□ 1.4
SYNGR3-201ENST00000248121 CIR1Q86X95 450 aaPredicted RBP23.78■■□□□ 1.4
SYNGR3-201ENST00000248121 TMC8Q8IU68 726 aa23.78■■□□□ 1.4
SYNGR3-201ENST00000248121 ZNF276Q8N554 614 aa23.78■■□□□ 1.4
SYNGR3-201ENST00000248121 CABS1Q96KC9 395 aa23.78■■□□□ 1.4
SYNGR3-201ENST00000248121 LRRC3Q9BY71 257 aa23.78■■□□□ 1.4
SYNGR3-201ENST00000248121 ZYG11BQ9C0D3 744 aa23.78■■□□□ 1.4
SYNGR3-201ENST00000248121 NACA2Q9H009 215 aa23.78■■□□□ 1.4
SYNGR3-201ENST00000248121 NSRP1Q9H0G5 558 aaKnown RBP23.78■■□□□ 1.4
SYNGR3-201ENST00000248121 TMEM248Q9NWD8 314 aa23.78■■□□□ 1.4
SYNGR3-201ENST00000248121 IL1RAPL1Q9NZN1 696 aa23.78■■□□□ 1.4
SYNGR3-201ENST00000248121 RFPL1O75677 317 aa23.77■■□□□ 1.4
SYNGR3-201ENST00000248121 RFPL2O75678 378 aa23.77■■□□□ 1.4
SYNGR3-201ENST00000248121 PEX11BO96011 259 aa23.77■■□□□ 1.4
SYNGR3-201ENST00000248121 GJA1P17302 382 aa23.77■■□□□ 1.4
SYNGR3-201ENST00000248121 CYP4F8P98187 520 aa23.77■■□□□ 1.4
SYNGR3-201ENST00000248121 PDK4Q16654 411 aa23.77■■□□□ 1.4
SYNGR3-201ENST00000248121 CERCAMQ5T4B2 595 aa23.77■■□□□ 1.4
SYNGR3-201ENST00000248121 MICALCLQ6ZW33 695 aa23.77■■□□□ 1.4
SYNGR3-201ENST00000248121 MARK2Q7KZI7 788 aaKnown RBP23.77■■□□□ 1.4
SYNGR3-201ENST00000248121 CCDC197Q8NCU1 140 aa23.77■■□□□ 1.4
SYNGR3-201ENST00000248121 APOPT1Q96IL0 206 aa23.77■■□□□ 1.4
SYNGR3-201ENST00000248121 EMILIN2Q9BXX0 1053 aa23.77■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms