RNA–Protein interactions for RNA: ENST00000245817.4

TNFSF9-201, Transcript of TNF superfamily member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF9, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9-201ENST00000245817 TEX264Q9Y6I9 313 aa19.1■□□□□ 0.65
TNFSF9-201ENST00000245817 ILVBLA1L0T0 632 aa19.09■□□□□ 0.65
TNFSF9-201ENST00000245817 H0Y626 953 aa19.09■□□□□ 0.65
TNFSF9-201ENST00000245817 SCAMP3O14828 347 aaKnown RBP19.09■□□□□ 0.65
TNFSF9-201ENST00000245817 POU2F2P09086 479 aa19.09■□□□□ 0.65
TNFSF9-201ENST00000245817 NRIP1P48552 1158 aa19.09■□□□□ 0.65
TNFSF9-201ENST00000245817 ZXDBP98169 803 aa19.09■□□□□ 0.65
TNFSF9-201ENST00000245817 ITKQ08881 620 aa19.09■□□□□ 0.65
TNFSF9-201ENST00000245817 AGBL2Q5U5Z8 902 aa19.09■□□□□ 0.65
TNFSF9-201ENST00000245817 OTOP3Q7RTS5 596 aa19.09■□□□□ 0.65
TNFSF9-201ENST00000245817 GRASPQ7Z6J2 395 aaPredicted RBP19.09■□□□□ 0.65
TNFSF9-201ENST00000245817 ADGRD2Q7Z7M1 963 aa19.09■□□□□ 0.65
TNFSF9-201ENST00000245817 BBS5Q8N3I7 341 aa19.09■□□□□ 0.65
TNFSF9-201ENST00000245817 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP19.09■□□□□ 0.65
TNFSF9-201ENST00000245817 DNAAF3Q8N9W5 541 aa19.09■□□□□ 0.65
TNFSF9-201ENST00000245817 FCRL5Q96RD9 977 aa19.09■□□□□ 0.65
TNFSF9-201ENST00000245817 SPON2Q9BUD6 331 aa19.09■□□□□ 0.65
TNFSF9-201ENST00000245817 ZC3H7BQ9UGR2 993 aaKnown RBP19.09■□□□□ 0.65
TNFSF9-201ENST00000245817 NUP205Q92621 2012 aa19.08■□□□□ 0.65
TNFSF9-201ENST00000245817 EXOC1LA0A1B0GW35 172 aa19.08■□□□□ 0.65
TNFSF9-201ENST00000245817 SDR42E2A6NKP2 422 aa19.08■□□□□ 0.65
TNFSF9-201ENST00000245817 ACVRL1P37023 503 aa19.08■□□□□ 0.65
TNFSF9-201ENST00000245817 GRIA1P42261 906 aa19.08■□□□□ 0.65
TNFSF9-201ENST00000245817 MMP13P45452 471 aa19.08■□□□□ 0.65
TNFSF9-201ENST00000245817 SLCO1A2P46721 670 aa19.08■□□□□ 0.65
TNFSF9-201ENST00000245817 GEMP55040 296 aa19.08■□□□□ 0.65
TNFSF9-201ENST00000245817 OXCT1P55809 520 aa19.08■□□□□ 0.65
TNFSF9-201ENST00000245817 SPARCL1Q14515 664 aa19.08■□□□□ 0.65
TNFSF9-201ENST00000245817 LONRF1Q17RB8 773 aa19.08■□□□□ 0.65
TNFSF9-201ENST00000245817 NAPEPLDQ6IQ20 393 aa19.08■□□□□ 0.65
TNFSF9-201ENST00000245817 CASC4Q6P4E1 433 aa19.08■□□□□ 0.65
TNFSF9-201ENST00000245817 LINC00523Q86TU6 105 aa19.08■□□□□ 0.65
TNFSF9-201ENST00000245817 CARNMT1Q8N4J0 409 aa19.08■□□□□ 0.65
TNFSF9-201ENST00000245817 FAM76AQ8TAV0 307 aa19.08■□□□□ 0.65
TNFSF9-201ENST00000245817 EPS8L3Q8TE67 593 aaKnown RBP19.08■□□□□ 0.65
TNFSF9-201ENST00000245817 GDPD5Q8WTR4 605 aa19.08■□□□□ 0.65
TNFSF9-201ENST00000245817 MUC3BQ9H195 1237 aa19.08■□□□□ 0.65
TNFSF9-201ENST00000245817 ANAPC1Q9H1A4 1944 aa19.08■□□□□ 0.65
TNFSF9-201ENST00000245817 CDH23Q9H251 3354 aa19.08■□□□□ 0.64
TNFSF9-201ENST00000245817 GREM1O60565 184 aa19.08■□□□□ 0.64
TNFSF9-201ENST00000245817 PRAMEF11O60813 436 aa19.08■□□□□ 0.64
TNFSF9-201ENST00000245817 TCEA3O75764 348 aa19.08■□□□□ 0.64
TNFSF9-201ENST00000245817 SUN1O94901 812 aa19.08■□□□□ 0.64
TNFSF9-201ENST00000245817 HLA-DQB2P05538 268 aa19.08■□□□□ 0.64
TNFSF9-201ENST00000245817 ATP5DP30049 168 aa19.08■□□□□ 0.64
TNFSF9-201ENST00000245817 SSTR1P30872 391 aa19.08■□□□□ 0.64
TNFSF9-201ENST00000245817 MAGEA3P43357 314 aa19.08■□□□□ 0.64
TNFSF9-201ENST00000245817 IFNAR2P48551 515 aa19.08■□□□□ 0.64
TNFSF9-201ENST00000245817 SGSHP51688 502 aa19.08■□□□□ 0.64
TNFSF9-201ENST00000245817 SESN2P58004 480 aaPredicted RBP19.08■□□□□ 0.64
TNFSF9-201ENST00000245817 GPX6P59796 221 aa19.08■□□□□ 0.64
TNFSF9-201ENST00000245817 LBRQ14739 615 aaKnown RBP19.08■□□□□ 0.64
TNFSF9-201ENST00000245817 DUSP6Q16828 381 aa19.08■□□□□ 0.64
TNFSF9-201ENST00000245817 TMCO4Q5TGY1 634 aa19.08■□□□□ 0.64
TNFSF9-201ENST00000245817 ZNF534Q76KX8 674 aa19.08■□□□□ 0.64
TNFSF9-201ENST00000245817 CPXM2Q8N436 756 aa19.08■□□□□ 0.64
TNFSF9-201ENST00000245817 TDRD5Q8NAT2 981 aaKnown RBP19.08■□□□□ 0.64
TNFSF9-201ENST00000245817 SH3RF2Q8TEC5 729 aa19.08■□□□□ 0.64
TNFSF9-201ENST00000245817 DDI1Q8WTU0 396 aa19.08■□□□□ 0.64
TNFSF9-201ENST00000245817 PGM2Q96G03 612 aa19.08■□□□□ 0.64
TNFSF9-201ENST00000245817 CFAP36Q96G28 342 aa19.08■□□□□ 0.64
TNFSF9-201ENST00000245817 ZNF599Q96NL3 588 aa19.08■□□□□ 0.64
TNFSF9-201ENST00000245817 PPCSQ9HAB8 311 aa19.08■□□□□ 0.64
TNFSF9-201ENST00000245817 NT5MQ9NPB1 228 aa19.08■□□□□ 0.64
TNFSF9-201ENST00000245817 UBP1Q9NZI7 540 aa19.08■□□□□ 0.64
TNFSF9-201ENST00000245817 TBC1D30Q9Y2I9 924 aa19.08■□□□□ 0.64
TNFSF9-201ENST00000245817 A0A0D9SEW6 157 aa19.07■□□□□ 0.64
TNFSF9-201ENST00000245817 E2F8A0AVK6 867 aa19.07■□□□□ 0.64
TNFSF9-201ENST00000245817 CACNG3O60359 315 aa19.07■□□□□ 0.64
TNFSF9-201ENST00000245817 CYBBP04839 570 aa19.07■□□□□ 0.64
TNFSF9-201ENST00000245817 GSTA2P09210 222 aa19.07■□□□□ 0.64
TNFSF9-201ENST00000245817 CDH18Q13634 790 aa19.07■□□□□ 0.64
TNFSF9-201ENST00000245817 ZNF235Q14590 738 aa19.07■□□□□ 0.64
TNFSF9-201ENST00000245817 KLHL38Q2WGJ6 581 aa19.07■□□□□ 0.64
TNFSF9-201ENST00000245817 MPPE1Q53F39 396 aa19.07■□□□□ 0.64
TNFSF9-201ENST00000245817 RNF219Q5W0B1 726 aaPredicted RBP19.07■□□□□ 0.64
TNFSF9-201ENST00000245817 ZNF783Q6ZMS7 281 aa19.07■□□□□ 0.64
TNFSF9-201ENST00000245817 CCNJLQ8IV13 435 aa19.07■□□□□ 0.64
TNFSF9-201ENST00000245817 BBS7Q8IWZ6 715 aa19.07■□□□□ 0.64
TNFSF9-201ENST00000245817 FAM217AQ8IXS0 508 aa19.07■□□□□ 0.64
TNFSF9-201ENST00000245817 OR7D4Q8NG98 312 aa19.07■□□□□ 0.64
TNFSF9-201ENST00000245817 SMG7Q92540 1137 aaKnown RBP19.07■□□□□ 0.64
TNFSF9-201ENST00000245817 CDCA3Q99618 268 aaPredicted RBP19.07■□□□□ 0.64
TNFSF9-201ENST00000245817 EBNA1BP2Q99848 306 aaKnown RBP19.07■□□□□ 0.64
TNFSF9-201ENST00000245817 MLPHQ9BV36 600 aaPredicted RBP19.07■□□□□ 0.64
TNFSF9-201ENST00000245817 SMG9Q9H0W8 520 aaKnown RBP19.07■□□□□ 0.64
TNFSF9-201ENST00000245817 ZNF576Q9H609 170 aa19.07■□□□□ 0.64
TNFSF9-201ENST00000245817 ATP13A1Q9HD20 1204 aa19.07■□□□□ 0.64
TNFSF9-201ENST00000245817 TDP1Q9NUW8 608 aa19.07■□□□□ 0.64
TNFSF9-201ENST00000245817 BFARQ9NZS9 450 aa19.07■□□□□ 0.64
TNFSF9-201ENST00000245817 NOVA2Q9UNW9 492 aaKnown RBP19.07■□□□□ 0.64
TNFSF9-201ENST00000245817 MRPS23Q9Y3D9 190 aaKnown RBP19.07■□□□□ 0.64
TNFSF9-201ENST00000245817 MTCL1Q9Y4B5 1905 aaKnown RBP19.06■□□□□ 0.64
TNFSF9-201ENST00000245817 KDELR3O43731 214 aa19.06■□□□□ 0.64
TNFSF9-201ENST00000245817 PEX11BO96011 259 aa19.06■□□□□ 0.64
TNFSF9-201ENST00000245817 STX2P32856 288 aa19.06■□□□□ 0.64
TNFSF9-201ENST00000245817 NTHL1P78549 312 aa19.06■□□□□ 0.64
TNFSF9-201ENST00000245817 SLC10A7Q0GE19 358 aa19.06■□□□□ 0.64
TNFSF9-201ENST00000245817 SLC5A9Q2M3M2 681 aa19.06■□□□□ 0.64
TNFSF9-201ENST00000245817 KCTD11Q693B1 232 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms