RNA–Protein interactions for RNA: ENST00000243563.7

SNRPA-201, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPA, Length 1,621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-201ENST00000243563 GRIA2P42262 883 aa20.54■□□□□ 0.88
SNRPA-201ENST00000243563 DRICH1Q6PGQ1 229 aaPredicted RBP20.54■□□□□ 0.88
SNRPA-201ENST00000243563 ZNF557Q8N988 423 aaPredicted RBP20.54■□□□□ 0.88
SNRPA-201ENST00000243563 WFIKKN2Q8TEU8 576 aa20.54■□□□□ 0.88
SNRPA-201ENST00000243563 MAML1Q92585 1016 aa20.54■□□□□ 0.88
SNRPA-201ENST00000243563 ARHGEF3Q9NR81 526 aa20.54■□□□□ 0.88
SNRPA-201ENST00000243563 ELOVL2Q9NXB9 296 aa20.54■□□□□ 0.88
SNRPA-201ENST00000243563 SEPT10Q9P0V9 454 aa20.54■□□□□ 0.88
SNRPA-201ENST00000243563 SLCO3A1Q9UIG8 710 aa20.54■□□□□ 0.88
SNRPA-201ENST00000243563 ERVW-1Q9UQF0 538 aa20.54■□□□□ 0.88
SNRPA-201ENST00000243563 ANKRD36A6QL64 1941 aa20.54■□□□□ 0.88
SNRPA-201ENST00000243563 A0A0A0MRY4 1105 aa20.53■□□□□ 0.88
SNRPA-201ENST00000243563 TBC1D3BA6NDS4 549 aa20.53■□□□□ 0.88
SNRPA-201ENST00000243563 HACD1B0YJ81 288 aa20.53■□□□□ 0.88
SNRPA-201ENST00000243563 MUSKO15146 869 aa20.53■□□□□ 0.88
SNRPA-201ENST00000243563 NCAM2O15394 837 aa20.53■□□□□ 0.88
SNRPA-201ENST00000243563 GJB3O75712 270 aa20.53■□□□□ 0.88
SNRPA-201ENST00000243563 APODP05090 189 aa20.53■□□□□ 0.88
SNRPA-201ENST00000243563 POLR2EP19388 210 aaKnown RBP20.53■□□□□ 0.88
SNRPA-201ENST00000243563 DMC1Q14565 340 aa20.53■□□□□ 0.88
SNRPA-201ENST00000243563 CYTH1Q15438 398 aa20.53■□□□□ 0.88
SNRPA-201ENST00000243563 EGFLAMQ63HQ2 1017 aa20.53■□□□□ 0.88
SNRPA-201ENST00000243563 CDKL3Q8IVW4 592 aaPredicted RBP20.53■□□□□ 0.88
SNRPA-201ENST00000243563 ZNF687Q8N1G0 1237 aa20.53■□□□□ 0.88
SNRPA-201ENST00000243563 PGBD5Q8N414 524 aa20.53■□□□□ 0.88
SNRPA-201ENST00000243563 FAM71DQ8N9W8 422 aa20.53■□□□□ 0.88
SNRPA-201ENST00000243563 ACOX2Q99424 681 aa20.53■□□□□ 0.88
SNRPA-201ENST00000243563 C2orf49Q9BVC5 232 aaPredicted RBP20.53■□□□□ 0.88
SNRPA-201ENST00000243563 MTG2Q9H4K7 406 aa20.53■□□□□ 0.88
SNRPA-201ENST00000243563 FCF1Q9Y324 198 aaKnown RBP20.53■□□□□ 0.88
SNRPA-201ENST00000243563 MATN3O15232 486 aa20.53■□□□□ 0.88
SNRPA-201ENST00000243563 KCNN4O15554 427 aa20.53■□□□□ 0.88
SNRPA-201ENST00000243563 SRCP12931 536 aa20.53■□□□□ 0.88
SNRPA-201ENST00000243563 PTPN3P26045 913 aa20.53■□□□□ 0.88
SNRPA-201ENST00000243563 SEC13P55735 322 aa20.53■□□□□ 0.88
SNRPA-201ENST00000243563 ECT2LQ008S8 904 aa20.53■□□□□ 0.88
SNRPA-201ENST00000243563 CKAP4Q07065 602 aaKnown RBP20.53■□□□□ 0.88
SNRPA-201ENST00000243563 TUBB2AQ13885 445 aa20.53■□□□□ 0.88
SNRPA-201ENST00000243563 CCDC137Q6PK04 289 aaKnown RBP20.53■□□□□ 0.88
SNRPA-201ENST00000243563 BZW1Q7L1Q6 419 aaKnown RBP20.53■□□□□ 0.88
SNRPA-201ENST00000243563 CNTD1Q8N815 330 aa20.53■□□□□ 0.88
SNRPA-201ENST00000243563 ZNF366Q8N895 744 aa20.53■□□□□ 0.88
SNRPA-201ENST00000243563 NOA1Q8NC60 698 aaKnown RBP20.53■□□□□ 0.88
SNRPA-201ENST00000243563 HTR3CQ8WXA8 447 aa20.53■□□□□ 0.88
SNRPA-201ENST00000243563 FAM3CQ92520 227 aa20.53■□□□□ 0.88
SNRPA-201ENST00000243563 KRT12Q99456 494 aa20.53■□□□□ 0.88
SNRPA-201ENST00000243563 TUBB2BQ9BVA1 445 aa20.53■□□□□ 0.88
SNRPA-201ENST00000243563 FRMD8P1Q9BZ68 369 aaPredicted RBP20.53■□□□□ 0.88
SNRPA-201ENST00000243563 ZNF148Q9UQR1 794 aa20.53■□□□□ 0.88
SNRPA-201ENST00000243563 MTF2Q9Y483 593 aaPredicted RBP20.53■□□□□ 0.88
SNRPA-201ENST00000243563 TTC24A2A3L6 582 aaPredicted RBP20.52■□□□□ 0.88
SNRPA-201ENST00000243563 ZNF821O75541 412 aaPredicted RBP20.52■□□□□ 0.88
SNRPA-201ENST00000243563 ITGAVP06756 1048 aa20.52■□□□□ 0.88
SNRPA-201ENST00000243563 ZSCAN5DPP0CG00 497 aa20.52■□□□□ 0.88
SNRPA-201ENST00000243563 GLULP15104 373 aa20.52■□□□□ 0.88
SNRPA-201ENST00000243563 PTGIRP43119 386 aa20.52■□□□□ 0.88
SNRPA-201ENST00000243563 RGRP47804 291 aa20.52■□□□□ 0.88
SNRPA-201ENST00000243563 SERPINH1P50454 418 aaKnown RBP20.52■□□□□ 0.88
SNRPA-201ENST00000243563 ACDQ96AP0 544 aa20.52■□□□□ 0.88
SNRPA-201ENST00000243563 NSMCE3Q96MG7 304 aa20.52■□□□□ 0.88
SNRPA-201ENST00000243563 IL12RB2Q99665 862 aa20.52■□□□□ 0.88
SNRPA-201ENST00000243563 UBA2Q9UBT2 640 aaPredicted RBP20.52■□□□□ 0.88
SNRPA-201ENST00000243563 AMACRQ9UHK6 382 aa20.52■□□□□ 0.88
SNRPA-201ENST00000243563 HPCAL4Q9UM19 191 aa20.52■□□□□ 0.88
SNRPA-201ENST00000243563 NDRG2Q9UN36 371 aaKnown RBP20.52■□□□□ 0.88
SNRPA-201ENST00000243563 MUC3AQ02505 3323 aa20.51■□□□□ 0.87
SNRPA-201ENST00000243563 GOLGA6L10A0A0M3HER8 536 aa20.51■□□□□ 0.87
SNRPA-201ENST00000243563 RNF103O00237 685 aa20.51■□□□□ 0.87
SNRPA-201ENST00000243563 TMCC1O94876 653 aa20.51■□□□□ 0.87
SNRPA-201ENST00000243563 JCHAINP01591 159 aa20.51■□□□□ 0.87
SNRPA-201ENST00000243563 HLA-DQB2P05538 268 aa20.51■□□□□ 0.87
SNRPA-201ENST00000243563 DLDP09622 509 aaKnown RBP20.51■□□□□ 0.87
SNRPA-201ENST00000243563 CCNB1P14635 433 aa20.51■□□□□ 0.87
SNRPA-201ENST00000243563 KIR2DL1P43626 348 aaPredicted RBP20.51■□□□□ 0.87
SNRPA-201ENST00000243563 IFI35P80217 286 aaPredicted RBP20.51■□□□□ 0.87
SNRPA-201ENST00000243563 LBRQ14739 615 aaKnown RBP20.51■□□□□ 0.87
SNRPA-201ENST00000243563 HEATR6Q6AI08 1181 aaKnown RBP20.51■□□□□ 0.87
SNRPA-201ENST00000243563 LRRC49Q8IUZ0 686 aa20.51■□□□□ 0.87
SNRPA-201ENST00000243563 ZNF567Q8N184 647 aa20.51■□□□□ 0.87
SNRPA-201ENST00000243563 SIX5Q8N196 739 aa20.51■□□□□ 0.87
SNRPA-201ENST00000243563 SH2D3CQ8N5H7 860 aa20.51■□□□□ 0.87
SNRPA-201ENST00000243563 ALLCQ8N6M5 410 aa20.51■□□□□ 0.87
SNRPA-201ENST00000243563 CCDC114Q96M63 670 aa20.51■□□□□ 0.87
SNRPA-201ENST00000243563 BRD8Q9H0E9 1235 aa20.51■□□□□ 0.87
SNRPA-201ENST00000243563 LHX3Q9UBR4 397 aa20.51■□□□□ 0.87
SNRPA-201ENST00000243563 WNT16Q9UBV4 365 aa20.51■□□□□ 0.87
SNRPA-201ENST00000243563 FBXL21Q9UKT6 434 aa20.51■□□□□ 0.87
SNRPA-201ENST00000243563 HS3ST2Q9Y278 367 aa20.51■□□□□ 0.87
SNRPA-201ENST00000243563 DRG1Q9Y295 367 aaKnown RBP20.51■□□□□ 0.87
SNRPA-201ENST00000243563 NEU2Q9Y3R4 380 aa20.51■□□□□ 0.87
SNRPA-201ENST00000243563 TTC34A8MYJ7 566 aa20.5■□□□□ 0.87
SNRPA-201ENST00000243563 WASH3PC4AMC7 463 aa20.5■□□□□ 0.87
SNRPA-201ENST00000243563 F5H423 210 aaPredicted RBP20.5■□□□□ 0.87
SNRPA-201ENST00000243563 CCDC188H7C350 402 aa20.5■□□□□ 0.87
SNRPA-201ENST00000243563 CHRNA3P32297 505 aa20.5■□□□□ 0.87
SNRPA-201ENST00000243563 CD68P34810 354 aaPredicted RBP20.5■□□□□ 0.87
SNRPA-201ENST00000243563 ZNF33AQ06730 810 aa20.5■□□□□ 0.87
SNRPA-201ENST00000243563 ZNF234Q14588 700 aa20.5■□□□□ 0.87
SNRPA-201ENST00000243563 IHHQ14623 411 aa20.5■□□□□ 0.87
SNRPA-201ENST00000243563 DGKKQ5KSL6 1271 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms