RNA–Protein interactions for RNA: ENST00000243082.4

HOXC11-201, Transcript of homeobox C11, humanhuman

TSL 3 BASIC

Gene HOXC11, Length 2,039 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-201ENST00000243082 GRTP1Q5TC63 336 aa18.82■□□□□ 0.6
HOXC11-201ENST00000243082 C10orf82Q8WW14 230 aa18.82■□□□□ 0.6
HOXC11-201ENST00000243082 HMCESQ96FZ2 354 aa18.82■□□□□ 0.6
HOXC11-201ENST00000243082 IGSF21Q96ID5 467 aa18.82■□□□□ 0.6
HOXC11-201ENST00000243082 AGAP2Q99490 1192 aa18.82■□□□□ 0.6
HOXC11-201ENST00000243082 KIFC1Q9BW19 673 aa18.82■□□□□ 0.6
HOXC11-201ENST00000243082 BACE2Q9Y5Z0 518 aa18.82■□□□□ 0.6
HOXC11-201ENST00000243082 NMBRP28336 390 aa18.81■□□□□ 0.6
HOXC11-201ENST00000243082 GEMP55040 296 aa18.81■□□□□ 0.6
HOXC11-201ENST00000243082 PDE1CQ14123 709 aaPredicted RBP18.81■□□□□ 0.6
HOXC11-201ENST00000243082 IKBKEQ14164 716 aa18.81■□□□□ 0.6
HOXC11-201ENST00000243082 ANO4Q32M45 955 aa18.81■□□□□ 0.6
HOXC11-201ENST00000243082 IPMKQ8NFU5 416 aa18.81■□□□□ 0.6
HOXC11-201ENST00000243082 FATE1Q969F0 183 aa18.81■□□□□ 0.6
HOXC11-201ENST00000243082 ZNF778Q96MU6 729 aa18.81■□□□□ 0.6
HOXC11-201ENST00000243082 MECRQ9BV79 373 aa18.81■□□□□ 0.6
HOXC11-201ENST00000243082 USH1CQ9Y6N9 552 aa18.81■□□□□ 0.6
HOXC11-201ENST00000243082 J3KR12 359 aa18.81■□□□□ 0.6
HOXC11-201ENST00000243082 KLF11O14901 512 aa18.81■□□□□ 0.6
HOXC11-201ENST00000243082 HNRNPDQ14103 355 aaKnown RBP18.81■□□□□ 0.6
HOXC11-201ENST00000243082 HSP90AA5PQ58FG0 334 aa18.81■□□□□ 0.6
HOXC11-201ENST00000243082 NADSYN1Q6IA69 706 aa18.81■□□□□ 0.6
HOXC11-201ENST00000243082 GBP7Q8N8V2 638 aaPredicted RBP18.81■□□□□ 0.6
HOXC11-201ENST00000243082 MYEOVQ96EZ4 313 aa18.81■□□□□ 0.6
HOXC11-201ENST00000243082 FICDQ9BVA6 458 aa18.81■□□□□ 0.6
HOXC11-201ENST00000243082 TSSK1BQ9BXA7 367 aa18.81■□□□□ 0.6
HOXC11-201ENST00000243082 DONSONQ9NYP3 566 aa18.81■□□□□ 0.6
HOXC11-201ENST00000243082 TXNDC16Q9P2K2 825 aa18.81■□□□□ 0.6
HOXC11-201ENST00000243082 TBX21Q9UL17 535 aa18.81■□□□□ 0.6
HOXC11-201ENST00000243082 COL4A6Q14031 1691 aa18.8■□□□□ 0.6
HOXC11-201ENST00000243082 CNKSR3Q6P9H4 555 aa18.8■□□□□ 0.6
HOXC11-201ENST00000243082 STRA8Q7Z7C7 330 aa18.8■□□□□ 0.6
HOXC11-201ENST00000243082 KCNMB4Q86W47 210 aa18.8■□□□□ 0.6
HOXC11-201ENST00000243082 ZNF784Q8NCA9 323 aaPredicted RBP18.8■□□□□ 0.6
HOXC11-201ENST00000243082 MRGPRX2Q96LB1 330 aa18.8■□□□□ 0.6
HOXC11-201ENST00000243082 CEP295NLQ96MC4 621 aa18.8■□□□□ 0.6
HOXC11-201ENST00000243082 PPP1R2P1Q96PQ5 205 aa18.8■□□□□ 0.6
HOXC11-201ENST00000243082 RBBP8Q99708 897 aa18.8■□□□□ 0.6
HOXC11-201ENST00000243082 CLSTN3Q9BQT9 956 aa18.8■□□□□ 0.6
HOXC11-201ENST00000243082 CRISPLD2Q9H0B8 497 aa18.8■□□□□ 0.6
HOXC11-201ENST00000243082 NPHS2Q9NP85 383 aa18.8■□□□□ 0.6
HOXC11-201ENST00000243082 SIRPGQ9P1W8 387 aa18.8■□□□□ 0.6
HOXC11-201ENST00000243082 DNAJC8O75937 253 aaPredicted RBP18.79■□□□□ 0.6
HOXC11-201ENST00000243082 IL1BP01584 269 aa18.79■□□□□ 0.6
HOXC11-201ENST00000243082 NEFHP12036 1026 aa18.79■□□□□ 0.6
HOXC11-201ENST00000243082 TUFMP49411 452 aaKnown RBP18.79■□□□□ 0.6
HOXC11-201ENST00000243082 KCNQ1P51787 676 aa18.79■□□□□ 0.6
HOXC11-201ENST00000243082 PDE1BQ01064 536 aa18.79■□□□□ 0.6
HOXC11-201ENST00000243082 CCDC15Q0P6D6 951 aa18.79■□□□□ 0.6
HOXC11-201ENST00000243082 OVGP1Q12889 678 aa18.79■□□□□ 0.6
HOXC11-201ENST00000243082 BNIP1Q12981 228 aa18.79■□□□□ 0.6
HOXC11-201ENST00000243082 PCID2Q5JVF3 399 aa18.79■□□□□ 0.6
HOXC11-201ENST00000243082 STXBP5Q5T5C0 1151 aa18.79■□□□□ 0.6
HOXC11-201ENST00000243082 ACBD5Q5T8D3 534 aaPredicted RBP18.79■□□□□ 0.6
HOXC11-201ENST00000243082 C1orf53Q5VUE5 145 aa18.79■□□□□ 0.6
HOXC11-201ENST00000243082 CIR1Q86X95 450 aaPredicted RBP18.79■□□□□ 0.6
HOXC11-201ENST00000243082 CNPY4Q8N129 248 aa18.79■□□□□ 0.6
HOXC11-201ENST00000243082 AZIN2Q96A70 460 aa18.79■□□□□ 0.6
HOXC11-201ENST00000243082 C20orf96Q9NUD7 363 aaPredicted RBP18.79■□□□□ 0.6
HOXC11-201ENST00000243082 C2CD2LO14523 706 aa18.79■□□□□ 0.6
HOXC11-201ENST00000243082 PMPCBO75439 489 aa18.79■□□□□ 0.6
HOXC11-201ENST00000243082 SEC24AO95486 1093 aa18.79■□□□□ 0.6
HOXC11-201ENST00000243082 GSRP00390 522 aa18.79■□□□□ 0.6
HOXC11-201ENST00000243082 F7P08709 466 aaPredicted RBP18.79■□□□□ 0.6
HOXC11-201ENST00000243082 RENBPP51606 427 aa18.79■□□□□ 0.6
HOXC11-201ENST00000243082 KPNA1P52294 538 aaPredicted RBP18.79■□□□□ 0.6
HOXC11-201ENST00000243082 FYB2Q5VWT5 728 aa18.79■□□□□ 0.6
HOXC11-201ENST00000243082 CES4AQ5XG92 561 aa18.79■□□□□ 0.6
HOXC11-201ENST00000243082 PKN3Q6P5Z2 889 aa18.79■□□□□ 0.6
HOXC11-201ENST00000243082 RANBP10Q6VN20 620 aa18.79■□□□□ 0.6
HOXC11-201ENST00000243082 KYAT3Q6YP21 454 aaKnown RBP18.79■□□□□ 0.6
HOXC11-201ENST00000243082 ISL2Q96A47 359 aa18.79■□□□□ 0.6
HOXC11-201ENST00000243082 RPRD1AQ96P16 312 aaPredicted RBP18.79■□□□□ 0.6
HOXC11-201ENST00000243082 MCMBPQ9BTE3 642 aa18.79■□□□□ 0.6
HOXC11-201ENST00000243082 SLC25A51Q9H1U9 297 aa18.79■□□□□ 0.6
HOXC11-201ENST00000243082 ENTPD7Q9NQZ7 604 aa18.79■□□□□ 0.6
HOXC11-201ENST00000243082 EMCNQ9ULC0 261 aa18.79■□□□□ 0.6
HOXC11-201ENST00000243082 CHKBQ9Y259 395 aa18.79■□□□□ 0.6
HOXC11-201ENST00000243082 HBS1LQ9Y450 684 aaKnown RBP18.79■□□□□ 0.6
HOXC11-201ENST00000243082 H0YHG0 523 aa18.78■□□□□ 0.6
HOXC11-201ENST00000243082 NEBLO76041 1014 aa18.78■□□□□ 0.6
HOXC11-201ENST00000243082 BPGMP07738 259 aa18.78■□□□□ 0.6
HOXC11-201ENST00000243082 SPRP35270 261 aaPredicted RBP18.78■□□□□ 0.6
HOXC11-201ENST00000243082 MAGEA12P43365 314 aa18.78■□□□□ 0.6
HOXC11-201ENST00000243082 LIMK2P53671 638 aa18.78■□□□□ 0.6
HOXC11-201ENST00000243082 SLC10A7Q0GE19 358 aa18.78■□□□□ 0.6
HOXC11-201ENST00000243082 PPM1JQ5JR12 505 aa18.78■□□□□ 0.6
HOXC11-201ENST00000243082 SNX30Q5VWJ9 437 aa18.78■□□□□ 0.6
HOXC11-201ENST00000243082 KDELC1Q6UW63 502 aa18.78■□□□□ 0.6
HOXC11-201ENST00000243082 CCDC117Q8IWD4 279 aaPredicted RBP18.78■□□□□ 0.6
HOXC11-201ENST00000243082 DCLK2Q8N568 766 aa18.78■□□□□ 0.6
HOXC11-201ENST00000243082 RFWD2Q8NHY2 731 aa18.78■□□□□ 0.6
HOXC11-201ENST00000243082 ZNF398Q8TD17 642 aa18.78■□□□□ 0.6
HOXC11-201ENST00000243082 DIS3LQ8TF46 1054 aaKnown RBP18.78■□□□□ 0.6
HOXC11-201ENST00000243082 PSMG2Q969U7 264 aa18.78■□□□□ 0.6
HOXC11-201ENST00000243082 KLHL5Q96PQ7 755 aa18.78■□□□□ 0.6
HOXC11-201ENST00000243082 AFF4Q9UHB7 1163 aaKnown RBP18.78■□□□□ 0.6
HOXC11-201ENST00000243082 CCDC78A2IDD5 438 aa18.78■□□□□ 0.6
HOXC11-201ENST00000243082 HGSO14964 777 aaPredicted RBP18.78■□□□□ 0.6
HOXC11-201ENST00000243082 BIRC5O15392 142 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms