RNA–Protein interactions for RNA: ENST00000226359.2

AFP-201, Transcript of alpha fetoprotein, humanhuman

TSL 5 BASIC

Gene AFP, Length 1,914 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFP-201ENST00000226359 DDX50Q9BQ39 737 aaKnown RBP5.9□□□□□ -1.46
AFP-201ENST00000226359 ULBP1Q9BZM6 244 aa5.9□□□□□ -1.46
AFP-201ENST00000226359 UBE2TQ9NPD8 197 aaPredicted RBP5.9□□□□□ -1.46
AFP-201ENST00000226359 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.9□□□□□ -1.46
AFP-201ENST00000226359 DEC1Q9P2X7 70 aa5.9□□□□□ -1.46
AFP-201ENST00000226359 ADAM30Q9UKF2 790 aa5.9□□□□□ -1.46
AFP-201ENST00000226359 HIF3AQ9Y2N7 669 aa5.9□□□□□ -1.46
AFP-201ENST00000226359 ZNF451Q9Y4E5 1061 aa5.9□□□□□ -1.46
AFP-201ENST00000226359 TRAF6Q9Y4K3 522 aa5.9□□□□□ -1.46
AFP-201ENST00000226359 ZNF318Q5VUA4 2279 aa5.9□□□□□ -1.47
AFP-201ENST00000226359 NUP210Q8TEM1 1887 aaPredicted RBP5.9□□□□□ -1.47
AFP-201ENST00000226359 TCRBV16S1A1N1A0A5B0 115 aa5.89□□□□□ -1.47
AFP-201ENST00000226359 SLC12A8A0AV02 714 aa5.89□□□□□ -1.47
AFP-201ENST00000226359 TBC1D3BA6NDS4 549 aa5.89□□□□□ -1.47
AFP-201ENST00000226359 O00370 1275 aa5.89□□□□□ -1.47
AFP-201ENST00000226359 THAP12O43422 761 aa5.89□□□□□ -1.47
AFP-201ENST00000226359 MT-CO1P00395 513 aa5.89□□□□□ -1.47
AFP-201ENST00000226359 NAT2P11245 290 aa5.89□□□□□ -1.47
AFP-201ENST00000226359 LCP1P13796 627 aa5.89□□□□□ -1.47
AFP-201ENST00000226359 COL8A1P27658 744 aa5.89□□□□□ -1.47
AFP-201ENST00000226359 HOXA6P31267 233 aa5.89□□□□□ -1.47
AFP-201ENST00000226359 CHKAP35790 457 aa5.89□□□□□ -1.47
AFP-201ENST00000226359 IGFALSP35858 605 aa5.89□□□□□ -1.47
AFP-201ENST00000226359 GALK1P51570 392 aa5.89□□□□□ -1.47
AFP-201ENST00000226359 BPIFB4P59827 614 aa5.89□□□□□ -1.47
AFP-201ENST00000226359 MRPS21P82921 87 aaKnown RBP5.89□□□□□ -1.47
AFP-201ENST00000226359 FOXD4Q12950 439 aaPredicted RBP5.89□□□□□ -1.47
AFP-201ENST00000226359 SIM2Q14190 667 aaPredicted RBP5.89□□□□□ -1.47
AFP-201ENST00000226359 ZRSR2Q15696 482 aaKnown RBP5.89□□□□□ -1.47
AFP-201ENST00000226359 CNGA2Q16280 664 aa5.89□□□□□ -1.47
AFP-201ENST00000226359 HSP90AA4PQ58FG1 418 aa5.89□□□□□ -1.47
AFP-201ENST00000226359 LAIR1Q6GTX8 287 aa5.89□□□□□ -1.47
AFP-201ENST00000226359 FSTL4Q6MZW2 842 aa5.89□□□□□ -1.47
AFP-201ENST00000226359 LCLAT1Q6UWP7 414 aa5.89□□□□□ -1.47
AFP-201ENST00000226359 Q6ZS52 159 aa5.89□□□□□ -1.47
AFP-201ENST00000226359 ACAD11Q709F0 780 aa5.89□□□□□ -1.47
AFP-201ENST00000226359 RRAGAQ7L523 313 aa5.89□□□□□ -1.47
AFP-201ENST00000226359 GPRIN1Q7Z2K8 1008 aa5.89□□□□□ -1.47
AFP-201ENST00000226359 TTC30AQ86WT1 665 aa5.89□□□□□ -1.47
AFP-201ENST00000226359 AGGF1Q8N302 714 aaeCLIP5.89□□□□□ -1.47
AFP-201ENST00000226359 ZNF276Q8N554 614 aa5.89□□□□□ -1.47
AFP-201ENST00000226359 RPLP0P6Q8NHW5 317 aa5.89□□□□□ -1.47
AFP-201ENST00000226359 BAHD1Q8TBE0 780 aaPredicted RBP5.89□□□□□ -1.47
AFP-201ENST00000226359 IPO4Q8TEX9 1081 aaKnown RBP5.89□□□□□ -1.47
AFP-201ENST00000226359 UCMAQ8WVF2 138 aa5.89□□□□□ -1.47
AFP-201ENST00000226359 IRGQQ8WZA9 623 aa5.89□□□□□ -1.47
AFP-201ENST00000226359 HSFY1Q96LI6 401 aa5.89□□□□□ -1.47
AFP-201ENST00000226359 MED15Q96RN5 788 aa5.89□□□□□ -1.47
AFP-201ENST00000226359 MIS12Q9H081 205 aa5.89□□□□□ -1.47
AFP-201ENST00000226359 EPC1Q9H2F5 836 aa5.89□□□□□ -1.47
AFP-201ENST00000226359 KCNF1Q9H3M0 494 aa5.89□□□□□ -1.47
AFP-201ENST00000226359 SYNCQ9H7C4 482 aa5.89□□□□□ -1.47
AFP-201ENST00000226359 CNGB3Q9NQW8 809 aa5.89□□□□□ -1.47
AFP-201ENST00000226359 SPHK2Q9NRA0 654 aa5.89□□□□□ -1.47
AFP-201ENST00000226359 SAMSN1Q9NSI8 373 aaKnown RBP5.89□□□□□ -1.47
AFP-201ENST00000226359 TMEM30AQ9NV96 361 aa5.89□□□□□ -1.47
AFP-201ENST00000226359 DNAJC17Q9NVM6 304 aaKnown RBP5.89□□□□□ -1.47
AFP-201ENST00000226359 MARCH2Q9P0N8 246 aa5.89□□□□□ -1.47
AFP-201ENST00000226359 USP18Q9UMW8 372 aa5.89□□□□□ -1.47
AFP-201ENST00000226359 HBS1LQ9Y450 684 aaKnown RBP5.89□□□□□ -1.47
AFP-201ENST00000226359 HHLA1C9JL84 531 aa5.89□□□□□ -1.47
AFP-201ENST00000226359 NEDD8-MDP1E9PL57 170 aa5.89□□□□□ -1.47
AFP-201ENST00000226359 CAPN9O14815 690 aa5.89□□□□□ -1.47
AFP-201ENST00000226359 RGS13O14921 159 aa5.89□□□□□ -1.47
AFP-201ENST00000226359 BEST1O76090 585 aa5.89□□□□□ -1.47
AFP-201ENST00000226359 RHOBTB1O94844 696 aa5.89□□□□□ -1.47
AFP-201ENST00000226359 KAT7O95251 611 aa5.89□□□□□ -1.47
AFP-201ENST00000226359 LATS1O95835 1130 aa5.89□□□□□ -1.47
AFP-201ENST00000226359 HMBSP08397 361 aa5.89□□□□□ -1.47
AFP-201ENST00000226359 MYBL2P10244 700 aa5.89□□□□□ -1.47
AFP-201ENST00000226359 ZNF18P17022 549 aa5.89□□□□□ -1.47
AFP-201ENST00000226359 EEF1GP26641 437 aaKnown RBP5.89□□□□□ -1.47
AFP-201ENST00000226359 CORO1AP31146 461 aaKnown RBP5.89□□□□□ -1.47
AFP-201ENST00000226359 TNFRSF4P43489 277 aa5.89□□□□□ -1.47
AFP-201ENST00000226359 FNTBP49356 437 aa5.89□□□□□ -1.47
AFP-201ENST00000226359 DGKEP52429 567 aa5.89□□□□□ -1.47
AFP-201ENST00000226359 GABREP78334 506 aa5.89□□□□□ -1.47
AFP-201ENST00000226359 DMC1Q14565 340 aa5.89□□□□□ -1.47
AFP-201ENST00000226359 ARHGAP44Q17R89 818 aa5.89□□□□□ -1.47
AFP-201ENST00000226359 LY6G5CQ5SRR4 150 aa5.89□□□□□ -1.47
AFP-201ENST00000226359 TSSK4Q6SA08 328 aa5.89□□□□□ -1.47
AFP-201ENST00000226359 HTR3DQ70Z44 454 aa5.89□□□□□ -1.47
AFP-201ENST00000226359 ASCL5Q7RTU5 278 aa5.89□□□□□ -1.47
AFP-201ENST00000226359 MTERF4Q7Z6M4 381 aaKnown RBP5.89□□□□□ -1.47
AFP-201ENST00000226359 VSTM4Q8IW00 320 aa5.89□□□□□ -1.47
AFP-201ENST00000226359 LRRC8AQ8IWT6 810 aa5.89□□□□□ -1.47
AFP-201ENST00000226359 BBS7Q8IWZ6 715 aa5.89□□□□□ -1.47
AFP-201ENST00000226359 ZBTB44Q8NCP5 570 aa5.89□□□□□ -1.47
AFP-201ENST00000226359 BVESQ8NE79 360 aa5.89□□□□□ -1.47
AFP-201ENST00000226359 UBA3Q8TBC4 463 aa5.89□□□□□ -1.47
AFP-201ENST00000226359 KCTD13Q8WZ19 329 aa5.89□□□□□ -1.47
AFP-201ENST00000226359 FAM149B1Q96BN6 582 aa5.89□□□□□ -1.47
AFP-201ENST00000226359 CHFRQ96EP1 664 aa5.89□□□□□ -1.47
AFP-201ENST00000226359 MRGPRX3Q96LB0 322 aa5.89□□□□□ -1.47
AFP-201ENST00000226359 BBS2Q9BXC9 721 aa5.89□□□□□ -1.47
AFP-201ENST00000226359 WNT10AQ9GZT5 417 aa5.89□□□□□ -1.47
AFP-201ENST00000226359 RNF38Q9H0F5 515 aa5.89□□□□□ -1.47
AFP-201ENST00000226359 HSD3B7Q9H2F3 369 aa5.89□□□□□ -1.47
AFP-201ENST00000226359 LINC00597Q9H2U6 94 aa5.89□□□□□ -1.47
AFP-201ENST00000226359 ZFP64Q9NPA5 681 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms