RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 NOMO2Q5JPE7 1267 aa13.42□□□□□ -0.26
COL1A1-201ENST00000225964 CELF3Q5SZQ8 465 aaKnown RBP13.42□□□□□ -0.26
COL1A1-201ENST00000225964 FAM171BQ6P995 826 aa13.42□□□□□ -0.26
COL1A1-201ENST00000225964 KRT73Q86Y46 540 aa13.42□□□□□ -0.26
COL1A1-201ENST00000225964 ZNF671Q8TAW3 534 aa13.42□□□□□ -0.26
COL1A1-201ENST00000225964 GAS2L1Q99501 681 aaPredicted RBP13.42□□□□□ -0.26
COL1A1-201ENST00000225964 ABCG4Q9H172 646 aa13.42□□□□□ -0.26
COL1A1-201ENST00000225964 RIOX1Q9H6W3 641 aa13.42□□□□□ -0.26
COL1A1-201ENST00000225964 A0A0B4J269 797 aa13.42□□□□□ -0.26
COL1A1-201ENST00000225964 EFCAB10A6NFE3 127 aa13.42□□□□□ -0.26
COL1A1-201ENST00000225964 SERPINE1P05121 402 aa13.42□□□□□ -0.26
COL1A1-201ENST00000225964 PAEPP09466 180 aa13.42□□□□□ -0.26
COL1A1-201ENST00000225964 RARRES1P49788 294 aa13.42□□□□□ -0.26
COL1A1-201ENST00000225964 PRKAA2P54646 552 aa13.42□□□□□ -0.26
COL1A1-201ENST00000225964 HSPA14Q0VDF9 509 aa13.42□□□□□ -0.26
COL1A1-201ENST00000225964 RBM43Q6ZSC3 357 aaKnown RBP13.42□□□□□ -0.26
COL1A1-201ENST00000225964 FLCNQ8NFG4 579 aa13.42□□□□□ -0.26
COL1A1-201ENST00000225964 C2orf49Q9BVC5 232 aaPredicted RBP13.42□□□□□ -0.26
COL1A1-201ENST00000225964 KLHL25Q9H0H3 589 aa13.42□□□□□ -0.26
COL1A1-201ENST00000225964 EPB41L4BQ9H329 900 aa13.42□□□□□ -0.26
COL1A1-201ENST00000225964 CCDC167Q9P0B6 97 aa13.42□□□□□ -0.26
COL1A1-201ENST00000225964 PAIP2BQ9ULR5 123 aaKnown RBP13.42□□□□□ -0.26
COL1A1-201ENST00000225964 PLAGL2Q9UPG8 496 aa13.42□□□□□ -0.26
COL1A1-201ENST00000225964 CARNS1A5YM72 827 aa13.42□□□□□ -0.26
COL1A1-201ENST00000225964 MSCO60682 206 aa13.42□□□□□ -0.26
COL1A1-201ENST00000225964 USP12O75317 370 aa13.42□□□□□ -0.26
COL1A1-201ENST00000225964 CYP1A1P04798 512 aaPredicted RBP13.42□□□□□ -0.26
COL1A1-201ENST00000225964 TTI2Q6NXR4 508 aa13.42□□□□□ -0.26
COL1A1-201ENST00000225964 SLC5A5Q92911 643 aa13.42□□□□□ -0.26
COL1A1-201ENST00000225964 ATP13A3Q9H7F0 1226 aa13.42□□□□□ -0.26
COL1A1-201ENST00000225964 RHBDL2Q9NX52 303 aa13.42□□□□□ -0.26
COL1A1-201ENST00000225964 PDP2Q9P2J9 529 aa13.42□□□□□ -0.26
COL1A1-201ENST00000225964 TMEM191CA6NGB0 347 aa13.42□□□□□ -0.26
COL1A1-201ENST00000225964 ETS1P14921 441 aa13.42□□□□□ -0.26
COL1A1-201ENST00000225964 PTPRAP18433 802 aa13.42□□□□□ -0.26
COL1A1-201ENST00000225964 TOB1P50616 345 aaPredicted RBP13.42□□□□□ -0.26
COL1A1-201ENST00000225964 ACSM2AQ08AH3 577 aa13.42□□□□□ -0.26
COL1A1-201ENST00000225964 CNGA2Q16280 664 aa13.42□□□□□ -0.26
COL1A1-201ENST00000225964 ACSM2BQ68CK6 577 aa13.42□□□□□ -0.26
COL1A1-201ENST00000225964 ITFG1Q8TB96 612 aa13.42□□□□□ -0.26
COL1A1-201ENST00000225964 NEUROD4Q9HD90 331 aa13.42□□□□□ -0.26
COL1A1-201ENST00000225964 ENOPH1Q9UHY7 261 aa13.42□□□□□ -0.26
COL1A1-201ENST00000225964 FAM86B1E9PN63 330 aa13.42□□□□□ -0.26
COL1A1-201ENST00000225964 AP3D1O14617 1153 aa13.42□□□□□ -0.26
COL1A1-201ENST00000225964 SLITRK3O94933 977 aa13.42□□□□□ -0.26
COL1A1-201ENST00000225964 ADRM1Q16186 407 aa13.42□□□□□ -0.26
COL1A1-201ENST00000225964 PLA2G4EQ3MJ16 856 aa13.42□□□□□ -0.26
COL1A1-201ENST00000225964 KCNT2Q6UVM3 1135 aa13.42□□□□□ -0.26
COL1A1-201ENST00000225964 OR52L1Q8NGH7 329 aa13.42□□□□□ -0.26
COL1A1-201ENST00000225964 SELENOMQ8WWX9 145 aa13.42□□□□□ -0.26
COL1A1-201ENST00000225964 COPS5Q92905 334 aa13.42□□□□□ -0.26
COL1A1-201ENST00000225964 REXO5Q96IC2 774 aaKnown RBP13.42□□□□□ -0.26
COL1A1-201ENST00000225964 HTATIP2Q9BUP3 242 aa13.42□□□□□ -0.26
COL1A1-201ENST00000225964 TM6SF2Q9BZW4 377 aa13.42□□□□□ -0.26
COL1A1-201ENST00000225964 ISM1B1AKI9 464 aa13.41□□□□□ -0.26
COL1A1-201ENST00000225964 ABRQ12979 859 aa13.41□□□□□ -0.26
COL1A1-201ENST00000225964 ZC3H12AQ5D1E8 599 aaKnown RBP13.41□□□□□ -0.26
COL1A1-201ENST00000225964 HYIQ5T013 277 aa13.41□□□□□ -0.26
COL1A1-201ENST00000225964 ARMC4Q5T2S8 1044 aa13.41□□□□□ -0.26
COL1A1-201ENST00000225964 OTOP1Q7RTM1 612 aa13.41□□□□□ -0.26
COL1A1-201ENST00000225964 RASAL3Q86YV0 1011 aa13.41□□□□□ -0.26
COL1A1-201ENST00000225964 NAT16Q8N8M0 369 aa13.41□□□□□ -0.26
COL1A1-201ENST00000225964 RMND5BQ96G75 393 aaPredicted RBP13.41□□□□□ -0.26
COL1A1-201ENST00000225964 NAALADL1Q9UQQ1 740 aa13.41□□□□□ -0.26
COL1A1-201ENST00000225964 NRCAMQ92823 1304 aa13.41□□□□□ -0.26
COL1A1-201ENST00000225964 IQCMA0A1B0GVH7 501 aa13.41□□□□□ -0.26
COL1A1-201ENST00000225964 FGF10O15520 208 aaPredicted RBP13.41□□□□□ -0.26
COL1A1-201ENST00000225964 HTR1BP28222 390 aa13.41□□□□□ -0.26
COL1A1-201ENST00000225964 HNF4AP41235 474 aa13.41□□□□□ -0.26
COL1A1-201ENST00000225964 NDUFAF6Q330K2 333 aa13.41□□□□□ -0.26
COL1A1-201ENST00000225964 RPTNQ6XPR3 784 aa13.41□□□□□ -0.26
COL1A1-201ENST00000225964 GET4Q7L5D6 327 aaPredicted RBP13.41□□□□□ -0.26
COL1A1-201ENST00000225964 RTL3Q8N8U3 475 aaKnown RBP13.41□□□□□ -0.26
COL1A1-201ENST00000225964 MIEF2Q96C03 454 aa13.41□□□□□ -0.26
COL1A1-201ENST00000225964 FAIM2Q9BWQ8 316 aa13.41□□□□□ -0.26
COL1A1-201ENST00000225964 CATP04040 527 aaKnown RBP13.41□□□□□ -0.26
COL1A1-201ENST00000225964 NEK3P51956 506 aa13.41□□□□□ -0.26
COL1A1-201ENST00000225964 DEFB115Q30KQ5 88 aa13.41□□□□□ -0.26
COL1A1-201ENST00000225964 CD248Q9HCU0 757 aa13.41□□□□□ -0.26
COL1A1-201ENST00000225964 PCDH12Q9NPG4 1184 aa13.41□□□□□ -0.26
COL1A1-201ENST00000225964 VAV3Q9UKW4 847 aa13.41□□□□□ -0.26
COL1A1-201ENST00000225964 PSME2Q9UL46 239 aa13.41□□□□□ -0.26
COL1A1-201ENST00000225964 SH3GLB1Q9Y371 365 aa13.41□□□□□ -0.26
COL1A1-201ENST00000225964 DNALI1O14645 258 aaPredicted RBP13.41□□□□□ -0.26
COL1A1-201ENST00000225964 MRASO14807 208 aa13.41□□□□□ -0.26
COL1A1-201ENST00000225964 GMFGO60234 142 aa13.41□□□□□ -0.26
COL1A1-201ENST00000225964 CXCL14O95715 111 aa13.41□□□□□ -0.26
COL1A1-201ENST00000225964 SPATA31D3P0C874 917 aa13.41□□□□□ -0.26
COL1A1-201ENST00000225964 CXCR2P25025 360 aa13.41□□□□□ -0.26
COL1A1-201ENST00000225964 MIPP30301 263 aa13.41□□□□□ -0.26
COL1A1-201ENST00000225964 NPNTQ6UXI9 565 aa13.41□□□□□ -0.26
COL1A1-201ENST00000225964 SPATA31D4Q6ZUB0 917 aa13.41□□□□□ -0.26
COL1A1-201ENST00000225964 PEG10Q86TG7 708 aaKnown RBP13.41□□□□□ -0.26
COL1A1-201ENST00000225964 MYLPFQ96A32 169 aa13.41□□□□□ -0.26
COL1A1-201ENST00000225964 TMEM237Q96Q45 408 aa13.41□□□□□ -0.26
COL1A1-201ENST00000225964 TBCBQ99426 244 aa13.41□□□□□ -0.26
COL1A1-201ENST00000225964 ALG9Q9H6U8 611 aa13.41□□□□□ -0.26
COL1A1-201ENST00000225964 URADA6NGE7 173 aa13.41□□□□□ -0.26
COL1A1-201ENST00000225964 BUD23O43709 281 aaKnown RBP13.41□□□□□ -0.26
COL1A1-201ENST00000225964 PSMB4P28070 264 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms