RNA–Protein interactions for RNA: ENST00000225576.7

TVP23C-201, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

TSL 1 (best) BASIC

Gene TVP23C, Length 1,527 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-201ENST00000225576 ILVBLA1L0T0 632 aa17.11■□□□□ 0.33
TVP23C-201ENST00000225576 A6NNZ2 444 aa17.11■□□□□ 0.33
TVP23C-201ENST00000225576 SOBPA7XYQ1 873 aa17.11■□□□□ 0.33
TVP23C-201ENST00000225576 GFRA2O00451 464 aa17.11■□□□□ 0.33
TVP23C-201ENST00000225576 PRAMEF11O60813 436 aa17.11■□□□□ 0.33
TVP23C-201ENST00000225576 CKMP06732 381 aa17.11■□□□□ 0.33
TVP23C-201ENST00000225576 DDX6P26196 483 aaKnown RBP eCLIP17.11■□□□□ 0.33
TVP23C-201ENST00000225576 ZNF177Q13360 481 aaPredicted RBP17.11■□□□□ 0.33
TVP23C-201ENST00000225576 SPARCL1Q14515 664 aa17.11■□□□□ 0.33
TVP23C-201ENST00000225576 TERF2Q15554 542 aa17.11■□□□□ 0.33
TVP23C-201ENST00000225576 SKIDA1Q1XH10 827 aa17.11■□□□□ 0.33
TVP23C-201ENST00000225576 TUBB8Q3ZCM7 444 aa17.11■□□□□ 0.33
TVP23C-201ENST00000225576 NAPEPLDQ6IQ20 393 aa17.11■□□□□ 0.33
TVP23C-201ENST00000225576 HTR3DQ70Z44 454 aa17.11■□□□□ 0.33
TVP23C-201ENST00000225576 MPP5Q8N3R9 675 aa17.11■□□□□ 0.33
TVP23C-201ENST00000225576 STAMBPL1Q96FJ0 436 aa17.11■□□□□ 0.33
TVP23C-201ENST00000225576 CFAP36Q96G28 342 aa17.11■□□□□ 0.33
TVP23C-201ENST00000225576 ZNF599Q96NL3 588 aa17.11■□□□□ 0.33
TVP23C-201ENST00000225576 DHRS4Q9BTZ2 278 aa17.11■□□□□ 0.33
TVP23C-201ENST00000225576 PLAC1Q9HBJ0 212 aa17.11■□□□□ 0.33
TVP23C-201ENST00000225576 LSM7Q9UK45 103 aaKnown RBP17.11■□□□□ 0.33
TVP23C-201ENST00000225576 MAD1L1Q9Y6D9 718 aa17.11■□□□□ 0.33
TVP23C-201ENST00000225576 POC1B-GALNT4F8VUJ3 575 aa17.11■□□□□ 0.33
TVP23C-201ENST00000225576 RFPL2O75678 378 aa17.11■□□□□ 0.33
TVP23C-201ENST00000225576 POU2F2P09086 479 aa17.11■□□□□ 0.33
TVP23C-201ENST00000225576 EPCAMP16422 314 aa17.11■□□□□ 0.33
TVP23C-201ENST00000225576 HPDP32754 393 aaPredicted RBP17.11■□□□□ 0.33
TVP23C-201ENST00000225576 ACVRL1P37023 503 aa17.11■□□□□ 0.33
TVP23C-201ENST00000225576 SGSHP51688 502 aa17.11■□□□□ 0.33
TVP23C-201ENST00000225576 GEMP55040 296 aa17.11■□□□□ 0.33
TVP23C-201ENST00000225576 SESN2P58004 480 aaPredicted RBP17.11■□□□□ 0.33
TVP23C-201ENST00000225576 PPP2R2AP63151 447 aa17.11■□□□□ 0.33
TVP23C-201ENST00000225576 NR1H3Q13133 447 aa17.11■□□□□ 0.33
TVP23C-201ENST00000225576 STEAP4Q687X5 459 aa17.11■□□□□ 0.33
TVP23C-201ENST00000225576 UNC5AQ6ZN44 842 aa17.11■□□□□ 0.33
TVP23C-201ENST00000225576 TAOK1Q7L7X3 1001 aa17.11■□□□□ 0.33
TVP23C-201ENST00000225576 ZNF354CQ86Y25 554 aa17.11■□□□□ 0.33
TVP23C-201ENST00000225576 OR52K1Q8NGK4 314 aa17.11■□□□□ 0.33
TVP23C-201ENST00000225576 ARNTL2Q8WYA1 636 aa17.11■□□□□ 0.33
TVP23C-201ENST00000225576 SLC46A2Q9BY10 475 aa17.11■□□□□ 0.33
TVP23C-201ENST00000225576 SLC25A51Q9H1U9 297 aa17.11■□□□□ 0.33
TVP23C-201ENST00000225576 HCFC1R1Q9NWW0 138 aa17.11■□□□□ 0.33
TVP23C-201ENST00000225576 BFARQ9NZS9 450 aa17.11■□□□□ 0.33
TVP23C-201ENST00000225576 DNMT3BQ9UBC3 853 aaKnown RBP17.11■□□□□ 0.33
TVP23C-201ENST00000225576 CTNNAL1Q9UBT7 734 aa17.11■□□□□ 0.33
TVP23C-201ENST00000225576 TSPAN3O60637 253 aa17.1■□□□□ 0.33
TVP23C-201ENST00000225576 XYLBO75191 536 aa17.1■□□□□ 0.33
TVP23C-201ENST00000225576 GJA1P17302 382 aa17.1■□□□□ 0.33
TVP23C-201ENST00000225576 PRKCHP24723 683 aa17.1■□□□□ 0.33
TVP23C-201ENST00000225576 MGAT1P26572 445 aa17.1■□□□□ 0.33
TVP23C-201ENST00000225576 ETFBP38117 255 aa17.1■□□□□ 0.33
TVP23C-201ENST00000225576 CCR2P41597 374 aa17.1■□□□□ 0.33
TVP23C-201ENST00000225576 NPY2RP49146 381 aa17.1■□□□□ 0.33
TVP23C-201ENST00000225576 SLC10A7Q0GE19 358 aa17.1■□□□□ 0.33
TVP23C-201ENST00000225576 ZNF783Q6ZMS7 281 aa17.1■□□□□ 0.33
TVP23C-201ENST00000225576 HJURPQ8NCD3 748 aaPredicted RBP17.1■□□□□ 0.33
TVP23C-201ENST00000225576 GSDMBQ8TAX9 411 aa17.1■□□□□ 0.33
TVP23C-201ENST00000225576 SHKBP1Q8TBC3 707 aa17.1■□□□□ 0.33
TVP23C-201ENST00000225576 PABPC5Q96DU9 382 aaKnown RBP17.1■□□□□ 0.33
TVP23C-201ENST00000225576 PDFQ9HBH1 243 aa17.1■□□□□ 0.33
TVP23C-201ENST00000225576 ZDHHC7Q9NXF8 308 aa17.1■□□□□ 0.33
TVP23C-201ENST00000225576 ARHGAP26Q9UNA1 814 aa17.1■□□□□ 0.33
TVP23C-201ENST00000225576 YBX2Q9Y2T7 364 aaKnown RBP17.1■□□□□ 0.33
TVP23C-201ENST00000225576 SH3BP1Q9Y3L3 701 aa17.1■□□□□ 0.33
TVP23C-201ENST00000225576 TTLL3Q9Y4R7 772 aa17.1■□□□□ 0.33
TVP23C-201ENST00000225576 A0A0D9SEW6 157 aa17.09■□□□□ 0.33
TVP23C-201ENST00000225576 NRG2O14511 850 aaPredicted RBP17.09■□□□□ 0.33
TVP23C-201ENST00000225576 KDELR3O43731 214 aa17.09■□□□□ 0.33
TVP23C-201ENST00000225576 C1QAP02745 245 aa17.09■□□□□ 0.33
TVP23C-201ENST00000225576 RHOP08100 348 aa17.09■□□□□ 0.33
TVP23C-201ENST00000225576 RHOCP08134 193 aa17.09■□□□□ 0.33
TVP23C-201ENST00000225576 PGAM1P18669 254 aa17.09■□□□□ 0.33
TVP23C-201ENST00000225576 HOXD9P28356 352 aaPredicted RBP17.09■□□□□ 0.33
TVP23C-201ENST00000225576 CDH17Q12864 832 aa17.09■□□□□ 0.33
TVP23C-201ENST00000225576 MPP3Q13368 585 aa17.09■□□□□ 0.33
TVP23C-201ENST00000225576 LBRQ14739 615 aaKnown RBP17.09■□□□□ 0.33
TVP23C-201ENST00000225576 TMCO4Q5TGY1 634 aa17.09■□□□□ 0.33
TVP23C-201ENST00000225576 ELMSAN1Q6PJG2 1045 aa17.09■□□□□ 0.33
TVP23C-201ENST00000225576 ADGRD1Q6QNK2 874 aa17.09■□□□□ 0.33
TVP23C-201ENST00000225576 EXOC3L1Q86VI1 746 aa17.09■□□□□ 0.33
TVP23C-201ENST00000225576 CYP4X1Q8N118 509 aa17.09■□□□□ 0.33
TVP23C-201ENST00000225576 CPXM2Q8N436 756 aa17.09■□□□□ 0.33
TVP23C-201ENST00000225576 DNAAF3Q8N9W5 541 aa17.09■□□□□ 0.33
TVP23C-201ENST00000225576 OR52K2Q8NGK3 314 aa17.09■□□□□ 0.33
TVP23C-201ENST00000225576 SPATA22Q8NHS9 363 aa17.09■□□□□ 0.33
TVP23C-201ENST00000225576 TMA16Q96EY4 203 aaKnown RBP17.09■□□□□ 0.33
TVP23C-201ENST00000225576 IMP4Q96G21 291 aaKnown RBP17.09■□□□□ 0.33
TVP23C-201ENST00000225576 TASP1Q9H6P5 420 aa17.09■□□□□ 0.33
TVP23C-201ENST00000225576 CNOT10Q9H9A5 744 aaKnown RBP17.09■□□□□ 0.33
TVP23C-201ENST00000225576 NT5MQ9NPB1 228 aa17.09■□□□□ 0.33
TVP23C-201ENST00000225576 UBP1Q9NZI7 540 aa17.09■□□□□ 0.33
TVP23C-201ENST00000225576 CFAP97Q9P2B7 532 aa17.09■□□□□ 0.33
TVP23C-201ENST00000225576 PSMC3IPQ9P2W1 217 aaPredicted RBP17.09■□□□□ 0.33
TVP23C-201ENST00000225576 ACTL7BQ9Y614 415 aa17.09■□□□□ 0.33
TVP23C-201ENST00000225576 NYNRINQ9P2P1 1898 aaKnown RBP17.08■□□□□ 0.33
TVP23C-201ENST00000225576 MAGEB16A2A368 324 aa17.08■□□□□ 0.32
TVP23C-201ENST00000225576 TYW5A2RUC4 315 aaKnown RBP17.08■□□□□ 0.32
TVP23C-201ENST00000225576 USP12O75317 370 aa17.08■□□□□ 0.32
TVP23C-201ENST00000225576 MOSPD3O75425 235 aa17.08■□□□□ 0.32
TVP23C-201ENST00000225576 ALDH1A2O94788 518 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms