RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 C1QTNF1Q9BXJ1 281 aa13.55□□□□□ -0.24
SRP54-201ENST00000216774 CHRAC1Q9NRG0 131 aa13.55□□□□□ -0.24
SRP54-201ENST00000216774 IARS2Q9NSE4 1012 aaKnown RBP13.55□□□□□ -0.24
SRP54-201ENST00000216774 KLK14Q9P0G3 267 aa13.55□□□□□ -0.24
SRP54-201ENST00000216774 CPSF2Q9P2I0 782 aaKnown RBP13.55□□□□□ -0.24
SRP54-201ENST00000216774 SMIM35A0A1B0GVV1 85 aa13.54□□□□□ -0.24
SRP54-201ENST00000216774 ATP9BO43861 1147 aa13.54□□□□□ -0.24
SRP54-201ENST00000216774 COL6A2P12110 1019 aa13.54□□□□□ -0.24
SRP54-201ENST00000216774 SMPD1P17405 629 aa13.54□□□□□ -0.24
SRP54-201ENST00000216774 MPSTP25325 297 aa13.54□□□□□ -0.24
SRP54-201ENST00000216774 SERPINB5P36952 375 aa13.54□□□□□ -0.24
SRP54-201ENST00000216774 ALDH1A3P47895 512 aa13.54□□□□□ -0.24
SRP54-201ENST00000216774 CHN2P52757 468 aa13.54□□□□□ -0.24
SRP54-201ENST00000216774 CDH17Q12864 832 aa13.54□□□□□ -0.24
SRP54-201ENST00000216774 HERC3Q15034 1050 aa13.54□□□□□ -0.24
SRP54-201ENST00000216774 PDK3Q15120 406 aa13.54□□□□□ -0.24
SRP54-201ENST00000216774 ARL13BQ3SXY8 428 aa13.54□□□□□ -0.24
SRP54-201ENST00000216774 NAPEPLDQ6IQ20 393 aa13.54□□□□□ -0.24
SRP54-201ENST00000216774 HFE2Q6ZVN8 426 aa13.54□□□□□ -0.24
SRP54-201ENST00000216774 MOB2Q70IA6 237 aa13.54□□□□□ -0.24
SRP54-201ENST00000216774 SNX32Q86XE0 403 aa13.54□□□□□ -0.24
SRP54-201ENST00000216774 TMEM151AQ8N4L1 468 aa13.54□□□□□ -0.24
SRP54-201ENST00000216774 NPWQ8N729 165 aa13.54□□□□□ -0.24
SRP54-201ENST00000216774 KIFC1Q9BW19 673 aa13.54□□□□□ -0.24
SRP54-201ENST00000216774 RHOJQ9H4E5 214 aa13.54□□□□□ -0.24
SRP54-201ENST00000216774 ZNF385DQ9H6B1 395 aa13.54□□□□□ -0.24
SRP54-201ENST00000216774 TASP1Q9H6P5 420 aa13.54□□□□□ -0.24
SRP54-201ENST00000216774 SLC39A10Q9ULF5 831 aa13.54□□□□□ -0.24
SRP54-201ENST00000216774 ZNF236Q9UL36 1845 aa13.54□□□□□ -0.24
SRP54-201ENST00000216774 AIM2O14862 343 aa13.53□□□□□ -0.24
SRP54-201ENST00000216774 PSMD3O43242 534 aa13.53□□□□□ -0.24
SRP54-201ENST00000216774 DENRO43583 198 aaKnown RBP13.53□□□□□ -0.24
SRP54-201ENST00000216774 STRNO43815 780 aa13.53□□□□□ -0.24
SRP54-201ENST00000216774 CHRNGP07510 517 aa13.53□□□□□ -0.24
SRP54-201ENST00000216774 FAM200BP0CF97 657 aa13.53□□□□□ -0.24
SRP54-201ENST00000216774 NFKB1P19838 968 aa13.53□□□□□ -0.24
SRP54-201ENST00000216774 GRIA4P48058 902 aa13.53□□□□□ -0.24
SRP54-201ENST00000216774 POLD2P49005 469 aa13.53□□□□□ -0.24
SRP54-201ENST00000216774 RAB27AP51159 221 aa13.53□□□□□ -0.24
SRP54-201ENST00000216774 CLCN2P51788 898 aa13.53□□□□□ -0.24
SRP54-201ENST00000216774 SH3BGRP55822 239 aaPredicted RBP13.53□□□□□ -0.24
SRP54-201ENST00000216774 ZBTB17Q13105 803 aa13.53□□□□□ -0.24
SRP54-201ENST00000216774 CYLC2Q14093 348 aaPredicted RBP13.53□□□□□ -0.24
SRP54-201ENST00000216774 TTLL12Q14166 644 aaPredicted RBP13.53□□□□□ -0.24
SRP54-201ENST00000216774 PRPSAP1Q14558 356 aa13.53□□□□□ -0.24
SRP54-201ENST00000216774 GRAMD1BQ3KR37 738 aa13.53□□□□□ -0.24
SRP54-201ENST00000216774 LSM12Q3MHD2 195 aaKnown RBP13.53□□□□□ -0.24
SRP54-201ENST00000216774 BNC2Q6ZN30 1099 aaPredicted RBP13.53□□□□□ -0.24
SRP54-201ENST00000216774 LINC00523Q86TU6 105 aa13.53□□□□□ -0.24
SRP54-201ENST00000216774 ZC3HC1Q86WB0 502 aaKnown RBP13.53□□□□□ -0.24
SRP54-201ENST00000216774 DSELQ8IZU8 1212 aa13.53□□□□□ -0.24
SRP54-201ENST00000216774 OR6J1Q8NGC5 347 aa13.53□□□□□ -0.24
SRP54-201ENST00000216774 TEKT5Q96M29 485 aa13.53□□□□□ -0.24
SRP54-201ENST00000216774 GOLGA2P5Q9HBQ8 144 aa13.53□□□□□ -0.24
SRP54-201ENST00000216774 RRN3Q9NYV6 651 aa13.53□□□□□ -0.24
SRP54-201ENST00000216774 PIN4Q9Y237 131 aaKnown RBP13.53□□□□□ -0.24
SRP54-201ENST00000216774 INPP5FQ9Y2H2 1132 aa13.53□□□□□ -0.24
SRP54-201ENST00000216774 DTNAQ9Y4J8 743 aa13.53□□□□□ -0.24
SRP54-201ENST00000216774 DICER1Q9UPY3 1922 aaKnown RBP13.53□□□□□ -0.24
SRP54-201ENST00000216774 MBLAC1A4D2B0 266 aaPredicted RBP13.53□□□□□ -0.24
SRP54-201ENST00000216774 GABRDO14764 452 aa13.53□□□□□ -0.24
SRP54-201ENST00000216774 NRP1O14786 923 aa13.53□□□□□ -0.24
SRP54-201ENST00000216774 DDHD2O94830 711 aa13.53□□□□□ -0.24
SRP54-201ENST00000216774 SBF1O95248 1867 aa13.53□□□□□ -0.24
SRP54-201ENST00000216774 TFEBP19484 476 aa13.53□□□□□ -0.24
SRP54-201ENST00000216774 ABCG1P45844 678 aa13.53□□□□□ -0.24
SRP54-201ENST00000216774 DAOAP59103 153 aa13.53□□□□□ -0.24
SRP54-201ENST00000216774 FOLH1Q04609 750 aa13.53□□□□□ -0.24
SRP54-201ENST00000216774 SLC12A1Q13621 1099 aa13.53□□□□□ -0.24
SRP54-201ENST00000216774 GRM3Q14832 879 aa13.53□□□□□ -0.24
SRP54-201ENST00000216774 PIGGQ5H8A4 983 aa13.53□□□□□ -0.24
SRP54-201ENST00000216774 ARL13AQ5H913 290 aaPredicted RBP13.53□□□□□ -0.24
SRP54-201ENST00000216774 UGT2A3Q6UWM9 527 aa13.53□□□□□ -0.24
SRP54-201ENST00000216774 KLHDC8BQ8IXV7 354 aa13.53□□□□□ -0.24
SRP54-201ENST00000216774 EFCAB3Q8N7B9 438 aa13.53□□□□□ -0.24
SRP54-201ENST00000216774 CATSPER1Q8NEC5 780 aa13.53□□□□□ -0.24
SRP54-201ENST00000216774 ACVR1CQ8NER5 493 aa13.53□□□□□ -0.24
SRP54-201ENST00000216774 AGR3Q8TD06 166 aa13.53□□□□□ -0.24
SRP54-201ENST00000216774 STYXQ8WUJ0 223 aa13.53□□□□□ -0.24
SRP54-201ENST00000216774 HAPLN3Q96S86 360 aa13.53□□□□□ -0.24
SRP54-201ENST00000216774 EPAS1Q99814 870 aa13.53□□□□□ -0.24
SRP54-201ENST00000216774 MED10Q9BTT4 135 aa13.53□□□□□ -0.24
SRP54-201ENST00000216774 EPB41L1Q9H4G0 881 aa13.53□□□□□ -0.24
SRP54-201ENST00000216774 Q9H521 79 aa13.53□□□□□ -0.24
SRP54-201ENST00000216774 WDR55Q9H6Y2 383 aaPredicted RBP13.53□□□□□ -0.24
SRP54-201ENST00000216774 ANLNQ9NQW6 1124 aa13.53□□□□□ -0.24
SRP54-201ENST00000216774 CNGB3Q9NQW8 809 aa13.53□□□□□ -0.24
SRP54-201ENST00000216774 NDUFA13Q9P0J0 144 aa13.53□□□□□ -0.24
SRP54-201ENST00000216774 COMMD3-BMI1R4GMX3 469 aa13.53□□□□□ -0.24
SRP54-201ENST00000216774 ZNF638Q14966 1978 aaKnown RBP13.53□□□□□ -0.24
SRP54-201ENST00000216774 PLXNB2O15031 1838 aa13.52□□□□□ -0.24
SRP54-201ENST00000216774 GOLGA8QA0A0J9YX86 632 aa13.52□□□□□ -0.24
SRP54-201ENST00000216774 SMIM31A0A1B0GVY4 71 aa13.52□□□□□ -0.24
SRP54-201ENST00000216774 GOLGA8OA6NCC3 632 aa13.52□□□□□ -0.24
SRP54-201ENST00000216774 GOLGA8NF8WBI6 632 aa13.52□□□□□ -0.24
SRP54-201ENST00000216774 I6L893 689 aaPredicted RBP13.52□□□□□ -0.24
SRP54-201ENST00000216774 TK2O00142 265 aa13.52□□□□□ -0.24
SRP54-201ENST00000216774 GRID2O43424 1007 aa13.52□□□□□ -0.24
SRP54-201ENST00000216774 TADA2AO75478 443 aa13.52□□□□□ -0.24
SRP54-201ENST00000216774 PIGNO95427 931 aa13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms