RNA–Protein interactions for RNA: ENST00000216484.6

SPTLC2-201, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC2, Length 8,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-201ENST00000216484 AMPD2Q01433 879 aa14.8□□□□□ -0.04
SPTLC2-201ENST00000216484 GNASQ5JWF2 1037 aa14.8□□□□□ -0.04
SPTLC2-201ENST00000216484 ZBTB46Q86UZ6 589 aa14.8□□□□□ -0.04
SPTLC2-201ENST00000216484 EXOC2Q96KP1 924 aa14.8□□□□□ -0.04
SPTLC2-201ENST00000216484 SLC6A15Q9H2J7 730 aa14.8□□□□□ -0.04
SPTLC2-201ENST00000216484 HBS1LQ9Y450 684 aaKnown RBP14.8□□□□□ -0.04
SPTLC2-201ENST00000216484 IST1P53990 364 aa14.8□□□□□ -0.04
SPTLC2-201ENST00000216484 Q4G0T1 1027 aa14.8□□□□□ -0.04
SPTLC2-201ENST00000216484 DEF8Q6ZN54 512 aa14.8□□□□□ -0.04
SPTLC2-201ENST00000216484 ILDR2Q71H61 639 aa14.8□□□□□ -0.04
SPTLC2-201ENST00000216484 FAM98AQ8NCA5 519 aaKnown RBP14.8□□□□□ -0.04
SPTLC2-201ENST00000216484 EFHD2Q96C19 240 aaPredicted RBP14.8□□□□□ -0.04
SPTLC2-201ENST00000216484 PHF12Q96QT6 1004 aa14.8□□□□□ -0.04
SPTLC2-201ENST00000216484 CDK5RAP1Q96SZ6 601 aaKnown RBP14.8□□□□□ -0.04
SPTLC2-201ENST00000216484 CBWD1Q9BRT8 395 aa14.8□□□□□ -0.04
SPTLC2-201ENST00000216484 RUSC1Q9BVN2 902 aa14.8□□□□□ -0.04
SPTLC2-201ENST00000216484 SPATA5L1Q9BVQ7 753 aa14.8□□□□□ -0.04
SPTLC2-201ENST00000216484 OPTCQ9UBM4 332 aa14.8□□□□□ -0.04
SPTLC2-201ENST00000216484 PMF1-BGLAPU3KQ54 211 aa14.8□□□□□ -0.04
SPTLC2-201ENST00000216484 RHOBTB3O94955 611 aa14.8□□□□□ -0.04
SPTLC2-201ENST00000216484 PDIA5Q14554 519 aa14.8□□□□□ -0.04
SPTLC2-201ENST00000216484 GPR107Q5VW38 600 aa14.8□□□□□ -0.04
SPTLC2-201ENST00000216484 KBTBD8Q8NFY9 601 aa14.8□□□□□ -0.04
SPTLC2-201ENST00000216484 MMADHCQ9H3L0 296 aaPredicted RBP14.8□□□□□ -0.04
SPTLC2-201ENST00000216484 TLR8Q9NR97 1041 aaKnown RBP14.8□□□□□ -0.04
SPTLC2-201ENST00000216484 TMEM216Q9P0N5 145 aa14.8□□□□□ -0.04
SPTLC2-201ENST00000216484 A0A075B6Q4 140 aa14.8□□□□□ -0.04
SPTLC2-201ENST00000216484 VIL1P09327 827 aaKnown RBP14.8□□□□□ -0.04
SPTLC2-201ENST00000216484 PDCD4Q53EL6 469 aaKnown RBP14.8□□□□□ -0.04
SPTLC2-201ENST00000216484 INTS11Q5TA45 600 aaKnown RBP14.8□□□□□ -0.04
SPTLC2-201ENST00000216484 SLC4A11Q8NBS3 891 aa14.8□□□□□ -0.04
SPTLC2-201ENST00000216484 NAT14Q8WUY8 206 aa14.8□□□□□ -0.04
SPTLC2-201ENST00000216484 OXNAD1Q96HP4 312 aaPredicted RBP14.8□□□□□ -0.04
SPTLC2-201ENST00000216484 GFM1Q96RP9 751 aaKnown RBP14.8□□□□□ -0.04
SPTLC2-201ENST00000216484 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.8□□□□□ -0.04
SPTLC2-201ENST00000216484 GGA3Q9NZ52 723 aa14.8□□□□□ -0.04
SPTLC2-201ENST00000216484 MAT2BQ9NZL9 334 aa14.8□□□□□ -0.04
SPTLC2-201ENST00000216484 SLC12A4Q9UP95 1085 aa14.8□□□□□ -0.04
SPTLC2-201ENST00000216484 PSMD9O00233 223 aa14.8□□□□□ -0.04
SPTLC2-201ENST00000216484 CYB561D2O14569 222 aa14.8□□□□□ -0.04
SPTLC2-201ENST00000216484 NR2F1P10589 423 aa14.8□□□□□ -0.04
SPTLC2-201ENST00000216484 WASHC2DQ5SRD0 308 aa14.8□□□□□ -0.04
SPTLC2-201ENST00000216484 OR8H1Q8NGG4 311 aa14.8□□□□□ -0.04
SPTLC2-201ENST00000216484 A0A0A6YYK5 440 aaPredicted RBP14.79□□□□□ -0.04
SPTLC2-201ENST00000216484 FXR1P51114 621 aaKnown RBP eCLIP14.79□□□□□ -0.04
SPTLC2-201ENST00000216484 CXorf57Q6NSI4 855 aaKnown RBP14.79□□□□□ -0.04
SPTLC2-201ENST00000216484 ELP3Q9H9T3 547 aa14.79□□□□□ -0.04
SPTLC2-201ENST00000216484 TMBIM4Q9HC24 238 aa14.79□□□□□ -0.04
SPTLC2-201ENST00000216484 PCDH12Q9NPG4 1184 aa14.79□□□□□ -0.04
SPTLC2-201ENST00000216484 IFT46Q9NQC8 304 aa14.79□□□□□ -0.04
SPTLC2-201ENST00000216484 PRMT7Q9NVM4 692 aaPredicted RBP14.79□□□□□ -0.04
SPTLC2-201ENST00000216484 MORF4L1Q9UBU8 362 aa14.79□□□□□ -0.04
SPTLC2-201ENST00000216484 MAGEB16A2A368 324 aa14.79□□□□□ -0.04
SPTLC2-201ENST00000216484 DCLK1O15075 740 aa14.79□□□□□ -0.04
SPTLC2-201ENST00000216484 JCHAINP01591 159 aa14.79□□□□□ -0.04
SPTLC2-201ENST00000216484 MAGP20916 626 aa14.79□□□□□ -0.04
SPTLC2-201ENST00000216484 RAP1GAPP47736 663 aa14.79□□□□□ -0.04
SPTLC2-201ENST00000216484 FMR1Q06787 632 aaKnown RBP eCLIP14.79□□□□□ -0.04
SPTLC2-201ENST00000216484 HKDC1Q2TB90 917 aa14.79□□□□□ -0.04
SPTLC2-201ENST00000216484 PIH1D2Q8WWB5 315 aa14.79□□□□□ -0.04
SPTLC2-201ENST00000216484 WDR12Q9GZL7 423 aaKnown RBP14.79□□□□□ -0.04
SPTLC2-201ENST00000216484 ARL15Q9NXU5 204 aa14.79□□□□□ -0.04
SPTLC2-201ENST00000216484 ANKRD6Q9Y2G4 727 aa14.79□□□□□ -0.04
SPTLC2-201ENST00000216484 DNAJB2P25686 324 aa14.79□□□□□ -0.04
SPTLC2-201ENST00000216484 IGFALSP35858 605 aa14.79□□□□□ -0.04
SPTLC2-201ENST00000216484 CBWD6Q4V339 395 aa14.79□□□□□ -0.04
SPTLC2-201ENST00000216484 PTCHD4Q6ZW05 846 aa14.79□□□□□ -0.04
SPTLC2-201ENST00000216484 DGLUCYQ7Z3D6 616 aa14.79□□□□□ -0.04
SPTLC2-201ENST00000216484 DEPDC4Q8N2C3 294 aa14.79□□□□□ -0.04
SPTLC2-201ENST00000216484 LENG1Q96BZ8 264 aaPredicted RBP14.79□□□□□ -0.04
SPTLC2-201ENST00000216484 CNPPD1Q9BV87 410 aa14.79□□□□□ -0.04
SPTLC2-201ENST00000216484 WDR27A2RRH5 827 aa14.79□□□□□ -0.04
SPTLC2-201ENST00000216484 MAFKO60675 156 aa14.79□□□□□ -0.04
SPTLC2-201ENST00000216484 AKT2P31751 481 aa14.79□□□□□ -0.04
SPTLC2-201ENST00000216484 CD151P48509 253 aa14.79□□□□□ -0.04
SPTLC2-201ENST00000216484 AP5B1Q2VPB7 878 aa14.79□□□□□ -0.04
SPTLC2-201ENST00000216484 STOX1Q6ZVD7 989 aa14.79□□□□□ -0.04
SPTLC2-201ENST00000216484 METTL16Q86W50 562 aaKnown RBP14.79□□□□□ -0.04
SPTLC2-201ENST00000216484 SUN5Q8TC36 379 aa14.79□□□□□ -0.04
SPTLC2-201ENST00000216484 OAS3Q9Y6K5 1087 aaKnown RBP14.79□□□□□ -0.04
SPTLC2-201ENST00000216484 OR10H3O60404 316 aa14.79□□□□□ -0.04
SPTLC2-201ENST00000216484 GIMD1P0DJR0 217 aa14.79□□□□□ -0.04
SPTLC2-201ENST00000216484 PAGE2BQ5JRK9 111 aa14.79□□□□□ -0.04
SPTLC2-201ENST00000216484 ADSSL1Q8N142 457 aa14.79□□□□□ -0.04
SPTLC2-201ENST00000216484 ELMO1Q92556 727 aa14.79□□□□□ -0.04
SPTLC2-201ENST00000216484 HPF1Q9NWY4 346 aa14.79□□□□□ -0.04
SPTLC2-201ENST00000216484 CYP2C9P11712 490 aa14.79□□□□□ -0.04
SPTLC2-201ENST00000216484 BCAT1P54687 386 aa14.79□□□□□ -0.04
SPTLC2-201ENST00000216484 MAZP56270 477 aaKnown RBP14.79□□□□□ -0.04
SPTLC2-201ENST00000216484 SLC26A11Q86WA9 606 aa14.79□□□□□ -0.04
SPTLC2-201ENST00000216484 SGCDQ92629 289 aa14.79□□□□□ -0.04
SPTLC2-201ENST00000216484 CPB2Q96IY4 423 aa14.79□□□□□ -0.04
SPTLC2-201ENST00000216484 CPNE1Q99829 537 aa14.79□□□□□ -0.04
SPTLC2-201ENST00000216484 SYT15Q9BQS2 421 aa14.79□□□□□ -0.04
SPTLC2-201ENST00000216484 ZNF350Q9GZX5 532 aa14.79□□□□□ -0.04
SPTLC2-201ENST00000216484 THG1LQ9NWX6 298 aaKnown RBP14.79□□□□□ -0.04
SPTLC2-201ENST00000216484 NCKAP1Q9Y2A7 1128 aa14.79□□□□□ -0.04
SPTLC2-201ENST00000216484 C2orf71A6NGG8 1288 aa14.79□□□□□ -0.04
SPTLC2-201ENST00000216484 XIAPP98170 497 aa14.79□□□□□ -0.04
SPTLC2-201ENST00000216484 NMRAL1Q9HBL8 299 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms