RNA–Protein interactions for RNA: ENST00000200181.7

ITGB4-201, Transcript of integrin subunit beta 4, humanhuman

TSL 1 (best) BASIC

Gene ITGB4, Length 5,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-201ENST00000200181 CXCL8P10145 99 aa17.4■□□□□ 0.38
ITGB4-201ENST00000200181 HOXB8P17481 243 aaPredicted RBP17.4■□□□□ 0.38
ITGB4-201ENST00000200181 DGKAP23743 735 aa17.4■□□□□ 0.38
ITGB4-201ENST00000200181 ZNF846Q147U1 533 aa17.4■□□□□ 0.38
ITGB4-201ENST00000200181 NFE2Q16621 373 aaPredicted RBP17.4■□□□□ 0.38
ITGB4-201ENST00000200181 ZC3H7AQ8IWR0 971 aaKnown RBP17.4■□□□□ 0.38
ITGB4-201ENST00000200181 ZCCHC9Q8N567 271 aaKnown RBP17.4■□□□□ 0.38
ITGB4-201ENST00000200181 LZTR1Q8N653 840 aa17.4■□□□□ 0.38
ITGB4-201ENST00000200181 PGM2Q96G03 612 aa17.4■□□□□ 0.38
ITGB4-201ENST00000200181 BTBD9Q96Q07 612 aa17.4■□□□□ 0.38
ITGB4-201ENST00000200181 FBXO44Q9H4M3 255 aa17.4■□□□□ 0.38
ITGB4-201ENST00000200181 CATSPERZQ9NTU4 200 aa17.4■□□□□ 0.38
ITGB4-201ENST00000200181 C3orf18Q9UK00 162 aa17.4■□□□□ 0.38
ITGB4-201ENST00000200181 AXIN2Q9Y2T1 843 aa17.4■□□□□ 0.38
ITGB4-201ENST00000200181 NEO1Q92859 1461 aa17.39■□□□□ 0.38
ITGB4-201ENST00000200181 ACSL4O60488 711 aa17.39■□□□□ 0.38
ITGB4-201ENST00000200181 FCHO2Q0JRZ9 810 aa17.39■□□□□ 0.38
ITGB4-201ENST00000200181 SPDYCQ5MJ68 293 aa17.39■□□□□ 0.38
ITGB4-201ENST00000200181 C16orf46Q6P387 395 aa17.39■□□□□ 0.38
ITGB4-201ENST00000200181 MTMR8Q96EF0 704 aa17.39■□□□□ 0.38
ITGB4-201ENST00000200181 CAB39LQ9H9S4 337 aa17.39■□□□□ 0.38
ITGB4-201ENST00000200181 ELL3Q9HB65 397 aaPredicted RBP17.39■□□□□ 0.38
ITGB4-201ENST00000200181 PGM3O95394 542 aa17.39■□□□□ 0.37
ITGB4-201ENST00000200181 S100A6P06703 90 aa17.39■□□□□ 0.37
ITGB4-201ENST00000200181 ZNF549Q6P9A3 640 aa17.39■□□□□ 0.37
ITGB4-201ENST00000200181 MARK2Q7KZI7 788 aaKnown RBP17.39■□□□□ 0.37
ITGB4-201ENST00000200181 COX4I2Q96KJ9 171 aa17.39■□□□□ 0.37
ITGB4-201ENST00000200181 FBXO10Q9UK96 956 aa17.39■□□□□ 0.37
ITGB4-201ENST00000200181 ANGPT4Q9Y264 503 aa17.39■□□□□ 0.37
ITGB4-201ENST00000200181 TPD52L2O43399 206 aaKnown RBP17.39■□□□□ 0.37
ITGB4-201ENST00000200181 SNAP91O60641 907 aa17.39■□□□□ 0.37
ITGB4-201ENST00000200181 ERN1O75460 977 aaKnown RBP17.39■□□□□ 0.37
ITGB4-201ENST00000200181 SLC25A3Q00325 362 aa17.39■□□□□ 0.37
ITGB4-201ENST00000200181 SLC45A4Q5BKX6 768 aa17.39■□□□□ 0.37
ITGB4-201ENST00000200181 RHBGQ9H310 441 aa17.39■□□□□ 0.37
ITGB4-201ENST00000200181 ATXN3LQ9H3M9 355 aa17.39■□□□□ 0.37
ITGB4-201ENST00000200181 TRMT13Q9NUP7 481 aaKnown RBP17.39■□□□□ 0.37
ITGB4-201ENST00000200181 MCUBQ9NWR8 336 aa17.39■□□□□ 0.37
ITGB4-201ENST00000200181 RSL24D1Q9UHA3 163 aaKnown RBP17.39■□□□□ 0.37
ITGB4-201ENST00000200181 DNPEPQ9ULA0 475 aa17.39■□□□□ 0.37
ITGB4-201ENST00000200181 SORCS3Q9UPU3 1222 aa17.39■□□□□ 0.37
ITGB4-201ENST00000200181 COMMD3-BMI1R4GMX3 469 aa17.39■□□□□ 0.37
ITGB4-201ENST00000200181 KIF1BO60333 1816 aa17.39■□□□□ 0.37
ITGB4-201ENST00000200181 ITGA2P17301 1181 aa17.39■□□□□ 0.37
ITGB4-201ENST00000200181 NDST1P52848 882 aa17.39■□□□□ 0.37
ITGB4-201ENST00000200181 PRKAG1P54619 331 aa17.39■□□□□ 0.37
ITGB4-201ENST00000200181 FCGRTP55899 365 aa17.39■□□□□ 0.37
ITGB4-201ENST00000200181 ARHGAP36Q6ZRI8 547 aa17.39■□□□□ 0.37
ITGB4-201ENST00000200181 SV2AQ7L0J3 742 aa17.39■□□□□ 0.37
ITGB4-201ENST00000200181 SELENOMQ8WWX9 145 aa17.39■□□□□ 0.37
ITGB4-201ENST00000200181 DSN1Q9H410 356 aa17.39■□□□□ 0.37
ITGB4-201ENST00000200181 ARHGEF5Q12774 1597 aa17.39■□□□□ 0.37
ITGB4-201ENST00000200181 FAM92AA1XBS5 289 aa17.39■□□□□ 0.37
ITGB4-201ENST00000200181 STX16-NPEPL1H3BU86 382 aa17.39■□□□□ 0.37
ITGB4-201ENST00000200181 STX16O14662 325 aa17.39■□□□□ 0.37
ITGB4-201ENST00000200181 SREBF1P36956 1147 aa17.39■□□□□ 0.37
ITGB4-201ENST00000200181 LLGL2Q6P1M3 1020 aa17.39■□□□□ 0.37
ITGB4-201ENST00000200181 MAGEC3Q8TD91 643 aa17.39■□□□□ 0.37
ITGB4-201ENST00000200181 CSDE1O75534 798 aaKnown RBP17.38■□□□□ 0.37
ITGB4-201ENST00000200181 TCF4P15884 667 aa17.38■□□□□ 0.37
ITGB4-201ENST00000200181 S100GP29377 79 aa17.38■□□□□ 0.37
ITGB4-201ENST00000200181 ZNHIT3Q15649 155 aaPredicted RBP17.38■□□□□ 0.37
ITGB4-201ENST00000200181 STK40Q8N2I9 435 aa17.38■□□□□ 0.37
ITGB4-201ENST00000200181 SFRP1Q8N474 314 aa17.38■□□□□ 0.37
ITGB4-201ENST00000200181 AGAP11Q8TF27 550 aa17.38■□□□□ 0.37
ITGB4-201ENST00000200181 PTCD3Q96EY7 689 aaKnown RBP17.38■□□□□ 0.37
ITGB4-201ENST00000200181 MYOZ2Q9NPC6 264 aa17.38■□□□□ 0.37
ITGB4-201ENST00000200181 SNX6Q9UNH7 406 aa17.38■□□□□ 0.37
ITGB4-201ENST00000200181 PCDHB5Q9Y5E4 795 aa17.38■□□□□ 0.37
ITGB4-201ENST00000200181 REREQ9P2R6 1566 aa17.38■□□□□ 0.37
ITGB4-201ENST00000200181 A0A0G2JLW4 131 aa17.38■□□□□ 0.37
ITGB4-201ENST00000200181 SNRPB2P08579 225 aaKnown RBP17.38■□□□□ 0.37
ITGB4-201ENST00000200181 COX4I1P13073 169 aa17.38■□□□□ 0.37
ITGB4-201ENST00000200181 BCL2L1Q07817 233 aa17.38■□□□□ 0.37
ITGB4-201ENST00000200181 SPESP1Q6UW49 350 aa17.38■□□□□ 0.37
ITGB4-201ENST00000200181 RBM44Q6ZP01 1051 aaKnown RBP17.38■□□□□ 0.37
ITGB4-201ENST00000200181 PJA1Q8NG27 643 aa17.38■□□□□ 0.37
ITGB4-201ENST00000200181 AHCYL2Q96HN2 611 aaKnown RBP17.38■□□□□ 0.37
ITGB4-201ENST00000200181 ALG9Q9H6U8 611 aa17.38■□□□□ 0.37
ITGB4-201ENST00000200181 TMCO1Q9UM00 188 aa17.38■□□□□ 0.37
ITGB4-201ENST00000200181 TBC1D30Q9Y2I9 924 aa17.38■□□□□ 0.37
ITGB4-201ENST00000200181 TCEA3O75764 348 aa17.38■□□□□ 0.37
ITGB4-201ENST00000200181 DNAJB2P25686 324 aa17.38■□□□□ 0.37
ITGB4-201ENST00000200181 RAB2AP61019 212 aa17.38■□□□□ 0.37
ITGB4-201ENST00000200181 SMCO1Q147U7 214 aa17.38■□□□□ 0.37
ITGB4-201ENST00000200181 CDKAL1Q5VV42 579 aa17.38■□□□□ 0.37
ITGB4-201ENST00000200181 SERPINB11Q96P15 392 aa17.38■□□□□ 0.37
ITGB4-201ENST00000200181 LRMDAQ9H2I8 198 aa17.38■□□□□ 0.37
ITGB4-201ENST00000200181 RAB21Q9UL25 225 aa17.38■□□□□ 0.37
ITGB4-201ENST00000200181 MAPRE3Q9UPY8 281 aa17.38■□□□□ 0.37
ITGB4-201ENST00000200181 GAKO14976 1311 aa17.38■□□□□ 0.37
ITGB4-201ENST00000200181 NTRK1P04629 796 aa17.38■□□□□ 0.37
ITGB4-201ENST00000200181 LTA4HP09960 611 aaKnown RBP17.38■□□□□ 0.37
ITGB4-201ENST00000200181 PTDSS1P48651 473 aaKnown RBP17.38■□□□□ 0.37
ITGB4-201ENST00000200181 DHDDSQ86SQ9 333 aa17.38■□□□□ 0.37
ITGB4-201ENST00000200181 MTG1Q9BT17 334 aaPredicted RBP17.38■□□□□ 0.37
ITGB4-201ENST00000200181 SPAG4Q9NPE6 437 aa17.38■□□□□ 0.37
ITGB4-201ENST00000200181 LEF1Q9UJU2 399 aaPredicted RBP17.38■□□□□ 0.37
ITGB4-201ENST00000200181 DPYSL3Q14195 570 aa17.37■□□□□ 0.37
ITGB4-201ENST00000200181 PFKFB4Q16877 469 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms