RNA–Protein interactions for RNA: ENST00000007390.2

TSR3-201, Transcript of TSR3, acp transferase ribosome maturation factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSR3, Length 1,243 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR3-201ENST00000007390 ATP13A1Q9HD20 1204 aa25.5■■□□□ 1.67
TSR3-201ENST00000007390 TM9SF3Q9HD45 589 aa25.5■■□□□ 1.67
TSR3-201ENST00000007390 PARVAQ9NVD7 372 aa25.5■■□□□ 1.67
TSR3-201ENST00000007390 TMEM248Q9NWD8 314 aa25.5■■□□□ 1.67
TSR3-201ENST00000007390 SARDHQ9UL12 918 aa25.5■■□□□ 1.67
TSR3-201ENST00000007390 A0A1W2PQJ5 194 aa25.49■■□□□ 1.67
TSR3-201ENST00000007390 FAM47DPA6NHR8 397 aa25.49■■□□□ 1.67
TSR3-201ENST00000007390 C1QTNF3-AMACRE9PGA6 284 aa25.49■■□□□ 1.67
TSR3-201ENST00000007390 K7ERQ8 282 aa25.49■■□□□ 1.67
TSR3-201ENST00000007390 SLC7A4O43246 635 aa25.49■■□□□ 1.67
TSR3-201ENST00000007390 GLDCP23378 1020 aa25.49■■□□□ 1.67
TSR3-201ENST00000007390 L1CAMP32004 1257 aa25.49■■□□□ 1.67
TSR3-201ENST00000007390 GRIA4P48058 902 aa25.49■■□□□ 1.67
TSR3-201ENST00000007390 CCR5P51681 352 aa25.49■■□□□ 1.67
TSR3-201ENST00000007390 METAP1P53582 386 aa25.49■■□□□ 1.67
TSR3-201ENST00000007390 BNC1Q01954 994 aa25.49■■□□□ 1.67
TSR3-201ENST00000007390 SLC20A2Q08357 652 aa25.49■■□□□ 1.67
TSR3-201ENST00000007390 KLHL30Q0D2K2 578 aa25.49■■□□□ 1.67
TSR3-201ENST00000007390 MAMLD1Q13495 774 aa25.49■■□□□ 1.67
TSR3-201ENST00000007390 RWDD4Q6NW29 188 aaKnown RBP25.49■■□□□ 1.67
TSR3-201ENST00000007390 IL27RAQ6UWB1 636 aa25.49■■□□□ 1.67
TSR3-201ENST00000007390 LINGO4Q6UY18 593 aa25.49■■□□□ 1.67
TSR3-201ENST00000007390 OR2A12Q8NGT7 310 aa25.49■■□□□ 1.67
TSR3-201ENST00000007390 SPON2Q9BUD6 331 aa25.49■■□□□ 1.67
TSR3-201ENST00000007390 ACE2Q9BYF1 805 aaPredicted RBP25.49■■□□□ 1.67
TSR3-201ENST00000007390 FARP1Q9Y4F1 1045 aaPredicted RBP25.49■■□□□ 1.67
TSR3-201ENST00000007390 TMCO5BA8MYB1 307 aa25.48■■□□□ 1.67
TSR3-201ENST00000007390 GOLGA6L19H0YKK7 550 aa25.48■■□□□ 1.67
TSR3-201ENST00000007390 CBX4O00257 560 aa25.48■■□□□ 1.67
TSR3-201ENST00000007390 DDX3XO00571 662 aaKnown RBP eCLIP25.48■■□□□ 1.671e-15■■■■■ 47.8
TSR3-201ENST00000007390 GIPC1O14908 333 aa25.48■■□□□ 1.67
TSR3-201ENST00000007390 SMAD6O43541 496 aaKnown RBP25.48■■□□□ 1.67
TSR3-201ENST00000007390 DESP17661 470 aa25.48■■□□□ 1.67
TSR3-201ENST00000007390 SERPINH1P50454 418 aaKnown RBP25.48■■□□□ 1.67
TSR3-201ENST00000007390 UBASH3AP57075 661 aa25.48■■□□□ 1.67
TSR3-201ENST00000007390 TEAD4Q15561 434 aa25.48■■□□□ 1.67
TSR3-201ENST00000007390 EFHC2Q5JST6 749 aa25.48■■□□□ 1.67
TSR3-201ENST00000007390 C22orf39Q6P5X5 142 aa25.48■■□□□ 1.67
TSR3-201ENST00000007390 PIP4K2CQ8TBX8 421 aa25.48■■□□□ 1.67
TSR3-201ENST00000007390 MAGEB5Q9BZ81 275 aa25.48■■□□□ 1.67
TSR3-201ENST00000007390 CEP44Q9C0F1 390 aa25.48■■□□□ 1.67
TSR3-201ENST00000007390 KDM4CQ9H3R0 1056 aa25.48■■□□□ 1.67
TSR3-201ENST00000007390 SLC32A1Q9H598 525 aa25.48■■□□□ 1.67
TSR3-201ENST00000007390 NDFIP2Q9NV92 336 aa25.48■■□□□ 1.67
TSR3-201ENST00000007390 A0A1W2PPC4 97 aa25.47■■□□□ 1.67
TSR3-201ENST00000007390 CER1O95813 267 aa25.47■■□□□ 1.67
TSR3-201ENST00000007390 CD59P13987 128 aa25.47■■□□□ 1.67
TSR3-201ENST00000007390 CSNK1EP49674 416 aaKnown RBP25.47■■□□□ 1.67
TSR3-201ENST00000007390 OGDHQ02218 1023 aa25.47■■□□□ 1.67
TSR3-201ENST00000007390 TMC6Q7Z403 805 aa25.47■■□□□ 1.67
TSR3-201ENST00000007390 DEFB124Q8NES8 71 aa25.47■■□□□ 1.67
TSR3-201ENST00000007390 OR14C36Q8NHC7 312 aa25.47■■□□□ 1.67
TSR3-201ENST00000007390 SYN2Q92777 582 aaPredicted RBP25.47■■□□□ 1.67
TSR3-201ENST00000007390 IQCDQ96DY2 449 aa25.47■■□□□ 1.67
TSR3-201ENST00000007390 MAGEH1Q9H213 219 aa25.47■■□□□ 1.67
TSR3-201ENST00000007390 FZD10Q9ULW2 581 aa25.47■■□□□ 1.67
TSR3-201ENST00000007390 CEP295Q9C0D2 2601 aa25.47■■□□□ 1.67
TSR3-201ENST00000007390 A0A1B0GVT2 93 aa25.46■■□□□ 1.67
TSR3-201ENST00000007390 PLRG1O43660 514 aaKnown RBP25.46■■□□□ 1.67
TSR3-201ENST00000007390 FTLP02792 175 aaPredicted RBP25.46■■□□□ 1.67
TSR3-201ENST00000007390 ZNF883P0CG24 379 aa25.46■■□□□ 1.67
TSR3-201ENST00000007390 PMLP29590 882 aa25.46■■□□□ 1.67
TSR3-201ENST00000007390 RACK1P63244 317 aaKnown RBP25.46■■□□□ 1.67
TSR3-201ENST00000007390 ARF5P84085 180 aa25.46■■□□□ 1.67
TSR3-201ENST00000007390 NFKBIBQ15653 356 aa25.46■■□□□ 1.67
TSR3-201ENST00000007390 AGBL4Q5VU57 503 aa25.46■■□□□ 1.67
TSR3-201ENST00000007390 SCYL2Q6P3W7 929 aa25.46■■□□□ 1.67
TSR3-201ENST00000007390 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP25.46■■□□□ 1.67
TSR3-201ENST00000007390 TMIEQ8NEW7 156 aa25.46■■□□□ 1.67
TSR3-201ENST00000007390 ARHGEF2Q92974 986 aaKnown RBP25.46■■□□□ 1.67
TSR3-201ENST00000007390 LATO43561 262 aa25.45■■□□□ 1.66
TSR3-201ENST00000007390 BNIP3LO60238 219 aa25.45■■□□□ 1.66
TSR3-201ENST00000007390 RTN2O75298 545 aa25.45■■□□□ 1.66
TSR3-201ENST00000007390 ZNF821O75541 412 aaPredicted RBP25.45■■□□□ 1.66
TSR3-201ENST00000007390 CTSLP07711 333 aa25.45■■□□□ 1.66
TSR3-201ENST00000007390 CHRNA3P32297 505 aa25.45■■□□□ 1.66
TSR3-201ENST00000007390 ACVRL1P37023 503 aa25.45■■□□□ 1.66
TSR3-201ENST00000007390 ZNF252P-AS1Q0IIN9 211 aa25.45■■□□□ 1.66
TSR3-201ENST00000007390 CNTN1Q12860 1018 aa25.45■■□□□ 1.66
TSR3-201ENST00000007390 PYROXD2Q8N2H3 581 aa25.45■■□□□ 1.66
TSR3-201ENST00000007390 PCDH20Q8N6Y1 951 aaKnown RBP25.45■■□□□ 1.66
TSR3-201ENST00000007390 DNAI1Q9UI46 699 aa25.45■■□□□ 1.66
TSR3-201ENST00000007390 ACACBO00763 2458 aa25.45■■□□□ 1.66
TSR3-201ENST00000007390 CHD8Q9HCK8 2581 aa25.45■■□□□ 1.66
TSR3-201ENST00000007390 CHD5Q8TDI0 1954 aa25.44■■□□□ 1.66
TSR3-201ENST00000007390 TPRP12270 2363 aaKnown RBP25.44■■□□□ 1.66
TSR3-201ENST00000007390 TMEM191CA6NGB0 347 aa25.44■■□□□ 1.66
TSR3-201ENST00000007390 ATMINO43313 823 aaPredicted RBP25.44■■□□□ 1.66
TSR3-201ENST00000007390 RAMP2O60895 175 aa25.44■■□□□ 1.66
TSR3-201ENST00000007390 CD160O95971 181 aa25.44■■□□□ 1.66
TSR3-201ENST00000007390 PRNPP04156 253 aa25.44■■□□□ 1.66
TSR3-201ENST00000007390 SKILP12757 684 aa25.44■■□□□ 1.66
TSR3-201ENST00000007390 GEMIN4P57678 1058 aaKnown RBP25.44■■□□□ 1.66
TSR3-201ENST00000007390 HLA-BQ31612 363 aa25.44■■□□□ 1.66
TSR3-201ENST00000007390 HGSNATQ68CP4 663 aa25.44■■□□□ 1.66
TSR3-201ENST00000007390 RTL3Q8N8U3 475 aaKnown RBP25.44■■□□□ 1.66
TSR3-201ENST00000007390 FNIP1Q8TF40 1166 aa25.44■■□□□ 1.66
TSR3-201ENST00000007390 TRIM11Q96F44 468 aa25.44■■□□□ 1.66
TSR3-201ENST00000007390 EPAS1Q99814 870 aa25.44■■□□□ 1.66
TSR3-201ENST00000007390 GAREM1Q9H706 876 aa25.44■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms