RNA–Protein interactions for RNA: ENSMUST00000113707.8

Tpm1-216, Transcript of Tropomyosin alpha-1 chain, mousemouse

TSL 1 (best) BASIC

Gene Tpm1, Length 1,898 nt, Biotype protein coding, Subcellular localisation Axon .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-216ENSMUST00000113707 Kif9Q9WV04 790 aa26.26■■□□□ 1.79
Tpm1-216ENSMUST00000113707 KlO35082 1014 aa26.25■■□□□ 1.79
Tpm1-216ENSMUST00000113707 Krt10P02535 570 aa26.25■■□□□ 1.79
Tpm1-216ENSMUST00000113707 Uhmk1P97343 419 aa26.25■■□□□ 1.79
Tpm1-216ENSMUST00000113707 Mc1rQ01727 315 aa26.25■■□□□ 1.79
Tpm1-216ENSMUST00000113707 Naaladl1Q7M758 745 aa26.25■■□□□ 1.79
Tpm1-216ENSMUST00000113707 Exoc3l1Q8BI71 739 aa26.25■■□□□ 1.79
Tpm1-216ENSMUST00000113707 PygbQ8CI94 843 aaKnown RBP26.25■■□□□ 1.79
Tpm1-216ENSMUST00000113707 Rprd1aQ8VDS4 312 aa26.25■■□□□ 1.79
Tpm1-216ENSMUST00000113707 Olfr847Q8VFF4 312 aa26.25■■□□□ 1.79
Tpm1-216ENSMUST00000113707 Chrna6Q9R0W9 494 aa26.25■■□□□ 1.79
Tpm1-216ENSMUST00000113707 Aldh18a1Q9Z110 795 aa26.25■■□□□ 1.79
Tpm1-216ENSMUST00000113707 C1qbpO35658 278 aa26.25■■□□□ 1.79
Tpm1-216ENSMUST00000113707 Slc2a7P0C6A1 513 aa26.25■■□□□ 1.79
Tpm1-216ENSMUST00000113707 GemP55041 295 aa26.25■■□□□ 1.79
Tpm1-216ENSMUST00000113707 Cdh6P97326 790 aa26.25■■□□□ 1.79
Tpm1-216ENSMUST00000113707 Slc9b2Q5BKR2 547 aa26.25■■□□□ 1.79
Tpm1-216ENSMUST00000113707 HiraQ61666 1015 aa26.25■■□□□ 1.79
Tpm1-216ENSMUST00000113707 Cdc14bQ6PFY9 485 aa26.25■■□□□ 1.79
Tpm1-216ENSMUST00000113707 Far2Q7TNT2 515 aa26.25■■□□□ 1.79
Tpm1-216ENSMUST00000113707 Dedd2Q8QZV0 330 aa26.25■■□□□ 1.79
Tpm1-216ENSMUST00000113707 Usp11Q99K46 921 aa26.25■■□□□ 1.79
Tpm1-216ENSMUST00000113707 Q99KU6 348 aa26.25■■□□□ 1.79
Tpm1-216ENSMUST00000113707 Nt5c3aQ9D020 331 aa26.25■■□□□ 1.79
Tpm1-216ENSMUST00000113707 Spc24Q9D083 201 aa26.25■■□□□ 1.79
Tpm1-216ENSMUST00000113707 Atp6v1e2Q9D593 226 aa26.25■■□□□ 1.79
Tpm1-216ENSMUST00000113707 Cog8Q9JJA2 640 aa26.25■■□□□ 1.79
Tpm1-216ENSMUST00000113707 Msh5Q9QUM7 833 aa26.25■■□□□ 1.79
Tpm1-216ENSMUST00000113707 Vmn2r25W4VSP2 855 aa26.25■■□□□ 1.79
Tpm1-216ENSMUST00000113707 Vmn2r70K7N702 854 aa26.24■■□□□ 1.79
Tpm1-216ENSMUST00000113707 Art2bO35975 289 aa26.24■■□□□ 1.79
Tpm1-216ENSMUST00000113707 Hcn2O88703 863 aa26.24■■□□□ 1.79
Tpm1-216ENSMUST00000113707 P01670 111 aa26.24■■□□□ 1.79
Tpm1-216ENSMUST00000113707 P01671 111 aa26.24■■□□□ 1.79
Tpm1-216ENSMUST00000113707 P01672 111 aa26.24■■□□□ 1.79
Tpm1-216ENSMUST00000113707 Rfx2P48379 717 aa26.24■■□□□ 1.79
Tpm1-216ENSMUST00000113707 Foxred2Q3USW5 665 aa26.24■■□□□ 1.79
Tpm1-216ENSMUST00000113707 Garnl3Q3V0G7 1038 aa26.24■■□□□ 1.79
Tpm1-216ENSMUST00000113707 Gdpd5Q640M6 607 aa26.24■■□□□ 1.79
Tpm1-216ENSMUST00000113707 ItpkcQ7TS72 678 aa26.24■■□□□ 1.79
Tpm1-216ENSMUST00000113707 Mterf2Q8BKY8 385 aa26.24■■□□□ 1.79
Tpm1-216ENSMUST00000113707 Nlrp10Q8CCN1 673 aa26.24■■□□□ 1.79
Tpm1-216ENSMUST00000113707 Tspan33Q8R3S2 283 aa26.24■■□□□ 1.79
Tpm1-216ENSMUST00000113707 Tmem135Q9CYV5 458 aa26.24■■□□□ 1.79
Tpm1-216ENSMUST00000113707 Ccdc13D3YV10 709 aa26.23■■□□□ 1.79
Tpm1-216ENSMUST00000113707 Ctbp1O88712 441 aa26.23■■□□□ 1.79
Tpm1-216ENSMUST00000113707 Ankmy2Q3TPE9 440 aa26.23■■□□□ 1.79
Tpm1-216ENSMUST00000113707 Otol1Q4ZJM7 482 aa26.23■■□□□ 1.79
Tpm1-216ENSMUST00000113707 Grid1Q61627 1009 aa26.23■■□□□ 1.79
Tpm1-216ENSMUST00000113707 Znf365Q8BG89 408 aa26.23■■□□□ 1.79
Tpm1-216ENSMUST00000113707 Slc18a2Q8BRU6 517 aa26.23■■□□□ 1.79
Tpm1-216ENSMUST00000113707 Trerf1Q8BXJ2 1205 aa26.23■■□□□ 1.79
Tpm1-216ENSMUST00000113707 Vmn1r188Q8K3N2 308 aa26.23■■□□□ 1.79
Tpm1-216ENSMUST00000113707 Pcdhb13Q91Y06 796 aa26.23■■□□□ 1.79
Tpm1-216ENSMUST00000113707 Grk2Q99MK8 689 aa26.23■■□□□ 1.79
Tpm1-216ENSMUST00000113707 Tlr9Q9EQU3 1032 aa26.23■■□□□ 1.79
Tpm1-216ENSMUST00000113707 Nhsl2B1AXH1 854 aa26.23■■□□□ 1.79
Tpm1-216ENSMUST00000113707 C2cd2E9Q3C1 696 aa26.23■■□□□ 1.79
Tpm1-216ENSMUST00000113707 Lrrc10bG3XA50 292 aa26.23■■□□□ 1.79
Tpm1-216ENSMUST00000113707 Serpinb6eI7HJI3 429 aa26.23■■□□□ 1.79
Tpm1-216ENSMUST00000113707 Sbk3P0C5K0 361 aa26.23■■□□□ 1.79
Tpm1-216ENSMUST00000113707 Bmp2P21274 394 aa26.23■■□□□ 1.79
Tpm1-216ENSMUST00000113707 Pdcd2P46718 343 aa26.23■■□□□ 1.79
Tpm1-216ENSMUST00000113707 Itga4Q00651 1039 aa26.23■■□□□ 1.79
Tpm1-216ENSMUST00000113707 Ripply1Q2WG77 201 aa26.23■■□□□ 1.79
Tpm1-216ENSMUST00000113707 Wee2Q66JT0 555 aa26.23■■□□□ 1.79
Tpm1-216ENSMUST00000113707 Tmem259Q8CIV2 574 aa26.23■■□□□ 1.79
Tpm1-216ENSMUST00000113707 Ppp4r1Q8K2V1 951 aa26.23■■□□□ 1.79
Tpm1-216ENSMUST00000113707 Taf12Q8VE65 161 aa26.23■■□□□ 1.79
Tpm1-216ENSMUST00000113707 Ttc9bQ9D6E4 239 aa26.23■■□□□ 1.79
Tpm1-216ENSMUST00000113707 Prss23Q9D6X6 382 aa26.23■■□□□ 1.79
Tpm1-216ENSMUST00000113707 Olfr414E9Q5P8 317 aa26.22■■□□□ 1.79
Tpm1-216ENSMUST00000113707 Bmpr2O35607 1038 aa26.22■■□□□ 1.79
Tpm1-216ENSMUST00000113707 UmpsP13439 481 aaKnown RBP26.22■■□□□ 1.79
Tpm1-216ENSMUST00000113707 Mapkapk2P49138 386 aa26.22■■□□□ 1.79
Tpm1-216ENSMUST00000113707 Hmgxb4Q80Y32 594 aaKnown RBP26.22■■□□□ 1.79
Tpm1-216ENSMUST00000113707 Gbp5Q8CFB4 590 aa26.22■■□□□ 1.79
Tpm1-216ENSMUST00000113707 Pnpla8Q8K1N1 776 aa26.22■■□□□ 1.79
Tpm1-216ENSMUST00000113707 Etv3Q8R4Z4 513 aa26.22■■□□□ 1.79
Tpm1-216ENSMUST00000113707 Ttc39cQ8VE09 580 aa26.22■■□□□ 1.79
Tpm1-216ENSMUST00000113707 Spred2Q924S7 410 aa26.22■■□□□ 1.79
Tpm1-216ENSMUST00000113707 LiasQ99M04 373 aa26.22■■□□□ 1.79
Tpm1-216ENSMUST00000113707 Mccc1Q99MR8 717 aa26.22■■□□□ 1.79
Tpm1-216ENSMUST00000113707 Serbp1Q9CY58 407 aaKnown RBP26.22■■□□□ 1.79
Tpm1-216ENSMUST00000113707 IqcdQ9D3V1 458 aa26.22■■□□□ 1.79
Tpm1-216ENSMUST00000113707 Scn5aQ9JJV9 2019 aa26.22■■□□□ 1.79
Tpm1-216ENSMUST00000113707 Olfr1049A2ARZ0 308 aa26.21■■□□□ 1.79
Tpm1-216ENSMUST00000113707 Ism2D3Z6A3 493 aa26.21■■□□□ 1.79
Tpm1-216ENSMUST00000113707 Vmn2r86G5E8Y4 848 aa26.21■■□□□ 1.79
Tpm1-216ENSMUST00000113707 Limk2O54785 638 aa26.21■■□□□ 1.79
Tpm1-216ENSMUST00000113707 DmwdQ08274 665 aa26.21■■□□□ 1.79
Tpm1-216ENSMUST00000113707 Dact3Q0PHV7 610 aa26.21■■□□□ 1.79
Tpm1-216ENSMUST00000113707 Fam189bQ5HZJ5 669 aa26.21■■□□□ 1.79
Tpm1-216ENSMUST00000113707 Cox8aQ64445 69 aa26.21■■□□□ 1.79
Tpm1-216ENSMUST00000113707 Nod1Q8BHB0 953 aa26.21■■□□□ 1.79
Tpm1-216ENSMUST00000113707 AgpsQ8C0I1 645 aa26.21■■□□□ 1.79
Tpm1-216ENSMUST00000113707 CherpQ8CGZ0 936 aaKnown RBP26.21■■□□□ 1.79
Tpm1-216ENSMUST00000113707 Acad9Q8JZN5 625 aaKnown RBP26.21■■□□□ 1.79
Tpm1-216ENSMUST00000113707 Dhrs1Q99L04 313 aa26.21■■□□□ 1.79
Tpm1-216ENSMUST00000113707 Anks3Q9CZK6 655 aa26.21■■□□□ 1.79
Retrieved 100 of 22,080 RNA–protein pairs in 18 ms