RNA–Protein interactions for RNA: ENSMUST00000113440.1

Ccdc88b-201, Transcript of Coiled-coil domain-containing protein 88B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc88b, Length 4,959 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88b-201ENSMUST00000113440 XiapQ60989 496 aa15.78■□□□□ 0.12
Ccdc88b-201ENSMUST00000113440 CrygnQ8VHL5 183 aa15.78■□□□□ 0.12
Ccdc88b-201ENSMUST00000113440 Lrrc17Q9CXD9 443 aa15.78■□□□□ 0.12
Ccdc88b-201ENSMUST00000113440 Zfp655Q9CZP3 541 aaKnown RBP15.78■□□□□ 0.12
Ccdc88b-201ENSMUST00000113440 Spata9Q9D9R3 252 aa15.78■□□□□ 0.12
Ccdc88b-201ENSMUST00000113440 Zfp780bE9Q2S6 806 aa15.78■□□□□ 0.12
Ccdc88b-201ENSMUST00000113440 Zfp607aQ3TQG9 686 aa15.78■□□□□ 0.12
Ccdc88b-201ENSMUST00000113440 Foxd1Q61345 456 aa15.78■□□□□ 0.12
Ccdc88b-201ENSMUST00000113440 Slc20a1Q61609 681 aa15.78■□□□□ 0.12
Ccdc88b-201ENSMUST00000113440 Agbl2Q8CDK2 862 aa15.78■□□□□ 0.12
Ccdc88b-201ENSMUST00000113440 Mta3Q924K8 591 aa15.78■□□□□ 0.12
Ccdc88b-201ENSMUST00000113440 Pacsin3Q99JB8 424 aa15.78■□□□□ 0.12
Ccdc88b-201ENSMUST00000113440 OoepQ9CWE6 164 aa15.78■□□□□ 0.12
Ccdc88b-201ENSMUST00000113440 Atp5oQ9DB20 213 aaKnown RBP15.78■□□□□ 0.12
Ccdc88b-201ENSMUST00000113440 Lima1Q9ERG0 753 aaKnown RBP15.78■□□□□ 0.12
Ccdc88b-201ENSMUST00000113440 Ropn1Q9ESG2 212 aa15.78■□□□□ 0.12
Ccdc88b-201ENSMUST00000113440 IkbkeQ9R0T8 717 aa15.78■□□□□ 0.12
Ccdc88b-201ENSMUST00000113440 Slc6a21A0A1B0GSD2 748 aa15.77■□□□□ 0.12
Ccdc88b-201ENSMUST00000113440 Hsd17b14E9Q3D4 273 aa15.77■□□□□ 0.12
Ccdc88b-201ENSMUST00000113440 Btnl1Q7TST0 509 aa15.77■□□□□ 0.12
Ccdc88b-201ENSMUST00000113440 Qsox1Q8BND5 748 aa15.77■□□□□ 0.12
Ccdc88b-201ENSMUST00000113440 Rnf8Q8VC56 488 aa15.77■□□□□ 0.12
Ccdc88b-201ENSMUST00000113440 Smim11aQ99J19 55 aa15.77■□□□□ 0.12
Ccdc88b-201ENSMUST00000113440 Dctn2Q99KJ8 402 aa15.77■□□□□ 0.12
Ccdc88b-201ENSMUST00000113440 Tmem79Q9D709 391 aa15.77■□□□□ 0.12
Ccdc88b-201ENSMUST00000113440 Stau1Q9Z108 487 aaKnown RBP15.77■□□□□ 0.12
Ccdc88b-201ENSMUST00000113440 Pou2f3P31362 431 aa15.77■□□□□ 0.12
Ccdc88b-201ENSMUST00000113440 Brcc3P46737 291 aa15.77■□□□□ 0.12
Ccdc88b-201ENSMUST00000113440 Sephs2P97364 452 aa15.77■□□□□ 0.12
Ccdc88b-201ENSMUST00000113440 Casp7P97864 303 aa15.77■□□□□ 0.12
Ccdc88b-201ENSMUST00000113440 Cspg5Q71M36 566 aa15.77■□□□□ 0.12
Ccdc88b-201ENSMUST00000113440 TbcelQ8C5W3 424 aa15.77■□□□□ 0.12
Ccdc88b-201ENSMUST00000113440 Sh3kbp1Q8R550 709 aaKnown RBP15.77■□□□□ 0.12
Ccdc88b-201ENSMUST00000113440 AuhQ9JLZ3 314 aa15.77■□□□□ 0.12
Ccdc88b-201ENSMUST00000113440 PignQ9R1S3 931 aa15.77■□□□□ 0.12
Ccdc88b-201ENSMUST00000113440 Csn1s1P19228 313 aa15.77■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Aldh3a1P47739 453 aa15.77■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Rpl5P47962 297 aaKnown RBP15.77■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Cyp2c37P56654 490 aa15.77■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Ag2Q3UPL5 249 aa15.77■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Abl2Q4JIM5 1182 aa15.77■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Ndrg1Q62433 394 aa15.77■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 WlsQ6DID7 541 aa15.77■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Ctxn3Q8BXZ0 80 aa15.77■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Trmt13Q8BYH3 481 aa15.77■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Wdr47Q8CGF6 920 aa15.77■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Mrpl58Q8R035 206 aa15.77■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Olfr1353Q8VGU8 309 aa15.77■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Olfr589Q8VGV8 317 aa15.77■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Snx15Q91WE1 337 aa15.77■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Pcdhb19Q91Y01 801 aa15.77■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 NamptQ99KQ4 491 aa15.77■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Ifi30Q9ESY9 248 aa15.77■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Egfl7Q9QXT5 275 aa15.77■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Olfr600E9PUN7 314 aa15.77■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Ctbp1O88712 441 aa15.77■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Coq7P97478 217 aa15.77■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 IdsQ08890 552 aa15.77■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Ankrd27Q3UMR0 1048 aa15.77■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Gm8773Q3UQ24 132 aa15.77■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Sp140Q6NSQ5 534 aa15.77■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Gabra5Q8BHJ7 463 aa15.77■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Fbxw21Q8BI38 468 aa15.77■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Glis1Q8K1M4 789 aa15.77■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Art3Q8R2G4 371 aa15.77■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Arl8bQ9CQW2 186 aa15.77■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Dcp2Q9CYC6 422 aa15.77■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Echdc3Q9D7J9 300 aa15.77■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Map3k6Q9WTR2 1291 aa15.77■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Olfr1023A2ASU6 311 aa15.76■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Sypl2O89104 264 aa15.76■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Rb1P13405 921 aa15.76■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Aarsd1Q3THG9 412 aa15.76■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Ccdc61Q3UJV1 511 aa15.76■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Trim67Q505D9 768 aa15.76■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Gstt1Q64471 240 aa15.76■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Ttyh3Q6P5F7 524 aa15.76■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Deup1Q7M6Y5 601 aa15.76■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Vps50Q8CI71 964 aa15.76■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Acox2Q9QXD1 681 aa15.76■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Gm44511A0A0N4SW10 223 aa15.76■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Rpl36P47964 105 aaKnown RBP15.76■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Cd36Q08857 472 aa15.76■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Rnf180Q3U827 592 aa15.76■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Dmc1Q61880 340 aa15.76■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Cyp2c54Q6XVG2 490 aa15.76■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Ap1s3Q7TN05 154 aa15.76■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Wdr11Q8K1X1 1223 aa15.76■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Rxfp2Q91ZZ5 737 aa15.76■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 IvdQ9JHI5 424 aa15.76■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Cyb561d2Q9WUE3 222 aa15.76■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Skint6A7XUZ6 1240 aa15.76■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Olfr292F8VQ84 308 aa15.76■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 H2-Eb1P04230 264 aa15.76■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 SykP48025 629 aa15.76■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Ak8Q32M07 479 aa15.76■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Akr1clQ3UXL1 322 aa15.76■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Pyhin1Q8BV49 420 aa15.76■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Zfp120Q8BZW4 436 aa15.76■□□□□ 0.11
Ccdc88b-201ENSMUST00000113440 Pcdha3Q91Y16 942 aa15.76■□□□□ 0.11
Retrieved 100 of 22,080 RNA–protein pairs in 26.4 ms