RNA–Protein interactions for RNA: ENSMUST00000076265.12

Upf3b-201, Transcript of UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3b, Length 2,344 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3b-201ENSMUST00000076265 Cacng2O88602 323 aa9.25□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Hoxb8P09632 243 aa9.25□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Eno1P17182 434 aaKnown RBP9.25□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Msr1P30204 458 aaKnown RBP9.25□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Pth1rP41593 591 aa9.25□□□□□ -0.93
Upf3b-201ENSMUST00000076265 SrprbP47758 269 aa9.25□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Morf4l1P60762 362 aa9.25□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Slc8a1P70414 970 aa9.25□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Mesp1P97309 243 aa9.25□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Taar7eQ5QD09 358 aa9.25□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Taar7bQ5QD11 358 aa9.25□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Dlg4Q62108 724 aa9.25□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Ppp1r26Q6A025 1163 aa9.25□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Ube2r2Q6ZWZ2 238 aa9.25□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Tmem202Q80W35 275 aa9.25□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Plekha8Q80W71 519 aa9.25□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Sec24bQ80ZX0 1251 aa9.25□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Ankrd46Q8BTZ5 228 aa9.25□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Gdap1l1Q8VE33 370 aa9.25□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Ogfrl1Q8VE52 464 aa9.25□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Capn8Q91VA3 703 aa9.25□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Tppp3Q9CRB6 176 aaKnown RBP9.25□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Q9D2Q3 444 aa9.25□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Senp8Q9D2Z4 221 aa9.25□□□□□ -0.93
Upf3b-201ENSMUST00000076265 FignQ9ERZ6 759 aa9.25□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Jph2Q9ET78 696 aa9.25□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Rfwd2Q9R1A8 733 aaKnown RBP9.25□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Gm28961A0A087WPA5 222 aa9.25□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Gm21858A0A087WQ24 222 aa9.25□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Gm5678A0A1B0GRG8 277 aa9.25□□□□□ -0.93
Upf3b-201ENSMUST00000076265 CatsperbA2RTF1 1109 aa9.25□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Arhgef26D3YYY8 869 aa9.25□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Gimd1E9PW74 217 aa9.25□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Gm37240E9QAY5 252 aa9.25□□□□□ -0.93
Upf3b-201ENSMUST00000076265 EpoP07321 192 aa9.25□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Acvr2bP27040 536 aa9.25□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Ido1P28776 407 aaKnown RBP9.25□□□□□ -0.93
Upf3b-201ENSMUST00000076265 PfkmP47857 780 aaKnown RBP9.25□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Cops2P61202 443 aaKnown RBP9.25□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Adra1dP97714 562 aa9.25□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Eml1Q05BC3 814 aa9.25□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Gpr160Q3U3F9 336 aa9.25□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Hipk4Q3V016 616 aa9.25□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Pla2g4dQ50L43 825 aa9.25□□□□□ -0.93
Upf3b-201ENSMUST00000076265 CochQ62507 552 aa9.25□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Ovch2Q7M761 609 aa9.25□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Spata2lQ8BNN1 426 aa9.25□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Ttc26Q8BS45 554 aa9.25□□□□□ -0.93
Upf3b-201ENSMUST00000076265 BoraQ8BS90 525 aa9.25□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Nup54Q8BTS4 510 aaKnown RBP9.25□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Stfa2l1Q8BWM3 103 aa9.25□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Ttc16Q8C1F5 767 aa9.25□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Ifi27Q8C6G0 260 aa9.25□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Slfn5Q8CBA2 884 aa9.25□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Tldc1Q8K0P3 455 aa9.25□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Stap2Q8R0L1 411 aa9.25□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Cd300ldQ8VCH2 221 aa9.25□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Slc8b1Q925Q3 585 aa9.25□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Ifi44lQ9BDB7 447 aa9.25□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Efcab2Q9CQ46 164 aa9.25□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Scyl3Q9DBQ7 735 aa9.25□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Arfgap1Q9EPJ9 414 aa9.25□□□□□ -0.93
Upf3b-201ENSMUST00000076265 GhrlQ9EQX0 117 aa9.25□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Sgk3Q9ERE3 496 aa9.25□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Bnip3lQ9Z2F7 218 aa9.25□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Mms22lB1AUR6 1238 aa9.24□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Slc22a28B2RT89 552 aa9.24□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Ddx43D3Z6P9 646 aa9.24□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Serpina1aP07758 413 aa9.24□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Slc10a3P21129 473 aa9.24□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Serpina1bP22599 413 aa9.24□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Jak1P52332 1153 aa9.24□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Pald1P70261 859 aa9.24□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Serpina1cQ00896 412 aa9.24□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Serpina1dQ00897 413 aa9.24□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Serpina1eQ00898 413 aa9.24□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Map3k9Q3U1V8 1077 aa9.24□□□□□ -0.93
Upf3b-201ENSMUST00000076265 LbrQ3U9G9 626 aaKnown RBP9.24□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Ece1Q4PZA2 769 aa9.24□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Olfr318Q5NCD7 306 aa9.24□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Nuak1Q641K5 658 aa9.24□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Hs6st2Q80UW0 612 aa9.24□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Znf365Q8BG89 408 aa9.24□□□□□ -0.93
Upf3b-201ENSMUST00000076265 DseQ8BLI4 958 aa9.24□□□□□ -0.93
Upf3b-201ENSMUST00000076265 5730596B20RikQ8BQ08 205 aa9.24□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Fam118bQ8C569 351 aa9.24□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Zc2hc1cQ8CCG1 527 aa9.24□□□□□ -0.93
Upf3b-201ENSMUST00000076265 OgtQ8CGY8 1046 aa9.24□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Steap3Q8CI59 488 aa9.24□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Cys1Q8R4T1 145 aa9.24□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Micu1Q8VCX5 477 aa9.24□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Elp2Q91WG4 831 aaKnown RBP9.24□□□□□ -0.93
Upf3b-201ENSMUST00000076265 SncbQ91ZZ3 133 aa9.24□□□□□ -0.93
Upf3b-201ENSMUST00000076265 NelfcdQ922L6 591 aa9.24□□□□□ -0.93
Upf3b-201ENSMUST00000076265 TirapQ99JY1 241 aa9.24□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Ndufa5Q9CPP6 116 aa9.24□□□□□ -0.93
Upf3b-201ENSMUST00000076265 CoprsQ9CQ13 173 aa9.24□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Fam212aQ9CX62 282 aa9.24□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Satl1Q9D5N8 744 aa9.24□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Cyp4f14Q9EP75 524 aa9.24□□□□□ -0.93
Retrieved 100 of 22,080 RNA–protein pairs in 28.1 ms