RNA–Protein interactions for RNA: ENSMUST00000053440.7

Ccdc40-202, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc40, Length 3,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-202ENSMUST00000053440 CybbQ61093 570 aa9.95□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Galnt10Q6P9S7 603 aa9.95□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 GnsQ8BFR4 544 aa9.95□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Mapkap1Q8BKH7 522 aa9.95□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 StgQ8BM15 349 aa9.95□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 EmsyQ8BMB0 1264 aaKnown RBP9.95□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 LnpepQ8C129 1025 aa9.95□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Pde10aQ8CA95 790 aa9.95□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Ace2Q8R0I0 805 aa9.95□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Tma16Q9CR02 221 aaKnown RBP9.95□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Clca1Q9D7Z6 913 aa9.95□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Doc2gQ9ESN1 387 aa9.95□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 St6galnac4Q9R2B6 360 aa9.95□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 CdylQ9WTK2 593 aa9.95□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Rps6ka2Q9WUT3 733 aa9.95□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Bnip3lQ9Z2F7 218 aa9.95□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 A930018M24RikB7ZMY3 218 aa9.95□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Vmn2r96E9PZU5 664 aa9.95□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Olfr603L7N1Y4 312 aa9.95□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Dpysl2O08553 572 aaKnown RBP9.95□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Slc2a7P0C6A1 513 aa9.95□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 AladP10518 330 aa9.95□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Cdh5P55284 784 aa9.95□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Ezh1P70351 747 aa9.95□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Grm5Q3UVX5 1203 aa9.95□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Zfp512bQ6PHP4 879 aa9.95□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Rad9bQ6WBX7 403 aa9.95□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Fastkd5Q7TMV3 762 aa9.95□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Pnma2Q8BHK0 365 aa9.95□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Ptk7Q8BKG3 1062 aa9.95□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Rap2cQ8BU31 183 aa9.95□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Zbtb8bQ8CII0 484 aa9.95□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Ipo11Q8K2V6 975 aa9.95□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Ppp6r2Q8R3Q2 923 aa9.95□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Pcdh18Q8VHR0 1134 aa9.95□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Smim14Q91VT8 99 aa9.95□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Prkag2Q91WG5 566 aa9.95□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Tpgs1Q99MS8 303 aa9.95□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Pard3bQ9CSB4 1203 aa9.95□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Echdc3Q9D7J9 300 aa9.95□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Chrnb2Q9ERK7 501 aa9.95□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 VapbQ9QY76 243 aaKnown RBP9.95□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Wnt8bQ9WUD6 350 aa9.95□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Ddx39bQ9Z1N5 428 aaKnown RBP9.95□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Nup205A0A0J9YUD5 2061 aaKnown RBP9.95□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 DgkdE9PUQ8 1220 aa9.95□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Gm6408J3QNG1 320 aa9.95□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Gm3402K7N5P2 326 aa9.95□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 CenpaO35216 134 aa9.95□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Dnmt3aO88508 908 aaKnown RBP9.95□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Ptpn1P35821 432 aa9.95□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 PpargP37238 505 aa9.95□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Slc12a1P55014 1095 aa9.95□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Mc4rP56450 332 aa9.95□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Traf6P70196 530 aa9.95□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Stt3bQ3TDQ1 823 aa9.95□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Plcl1Q3USB7 1096 aa9.95□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Mpzl3Q3V3F6 237 aa9.95□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Ecm1Q61508 559 aa9.95□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Itih1Q61702 907 aa9.95□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 PostnQ62009 838 aa9.95□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Gpsm1Q6IR34 673 aa9.95□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Tas2r115Q7M719 310 aa9.95□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Dnajb13Q80Y75 316 aa9.95□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Anapc2Q8BZQ7 837 aa9.95□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Sik2Q8CFH6 931 aa9.95□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 4921530L21RikQ9CQ47 274 aa9.95□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 EtfbQ9DCW4 255 aaKnown RBP9.95□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Rab27aQ9ERI2 221 aa9.95□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Sept6Q9R1T4 434 aa9.95□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Chek2Q9Z265 546 aa9.95□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 InvsO89019 1062 aa9.94□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Il12bP43432 335 aa9.94□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Adamts1P97857 968 aa9.94□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Itga4Q00651 1039 aa9.94□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Tmed1Q3V009 227 aa9.94□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Icam5Q60625 917 aa9.94□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Tll1Q62381 1013 aa9.94□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 CochQ62507 552 aa9.94□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Tmem151aQ6GQT5 468 aa9.94□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Tas2r125Q7M710 311 aa9.94□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Olfr212Q7TS33 327 aa9.94□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 ChfrQ810L3 664 aa9.94□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Amer2Q8CCJ4 672 aa9.94□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Snrnp27Q8K194 155 aa9.94□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Eva1bQ8K2Y3 164 aa9.94□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Sntg2Q925E0 539 aa9.94□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 LiasQ99M04 373 aa9.94□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Arhgap8Q9CXP4 425 aa9.94□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Aldh1b1Q9CZS1 519 aa9.94□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Ifrd2Q9D8U0 441 aa9.94□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 RecqlQ9Z129 648 aa9.94□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 XntrpcF8VQM8 1264 aa9.94□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Rdh7O88451 316 aa9.94□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 P01641 117 aa9.94□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Gabrb3P63080 473 aa9.94□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Btg1-ps1Q3V0S2 161 aa9.94□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Btg1-ps2Q3V0X0 161 aa9.94□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Zfp658Q5PPQ4 887 aa9.94□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Dlx3Q64205 287 aa9.94□□□□□ -0.82
Retrieved 100 of 22,080 RNA–protein pairs in 39.2 ms