RNA–Protein interactions for RNA: ENSMUST00000043767.8

Upf3a-201, Transcript of MCG3697, isoform CRA_c, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3a, Length 2,057 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3a-201ENSMUST00000043767 Trim68Q8K243 485 aa23.34■■□□□ 1.33
Upf3a-201ENSMUST00000043767 TfQ921I1 697 aa23.34■■□□□ 1.33
Upf3a-201ENSMUST00000043767 Decr1Q9CQ62 335 aaKnown RBP23.34■■□□□ 1.33
Upf3a-201ENSMUST00000043767 Tdrd12Q9CWU0 1215 aa23.34■■□□□ 1.33
Upf3a-201ENSMUST00000043767 Slc22a17Q9D9E0 401 aa23.34■■□□□ 1.33
Upf3a-201ENSMUST00000043767 Slfn2Q9Z0I6 378 aa23.34■■□□□ 1.33
Upf3a-201ENSMUST00000043767 Lilra6A0A0B4J1F3 663 aa23.34■■□□□ 1.33
Upf3a-201ENSMUST00000043767 Ebf2O08792 575 aa23.34■■□□□ 1.33
Upf3a-201ENSMUST00000043767 Shoc2O88520 582 aaKnown RBP23.34■■□□□ 1.33
Upf3a-201ENSMUST00000043767 PrlrQ08501 608 aa23.34■■□□□ 1.33
Upf3a-201ENSMUST00000043767 Agap2Q3UHD9 1186 aa23.34■■□□□ 1.33
Upf3a-201ENSMUST00000043767 Sh2d5Q8JZW5 429 aa23.34■■□□□ 1.33
Upf3a-201ENSMUST00000043767 ClmpQ8R373 373 aa23.34■■□□□ 1.33
Upf3a-201ENSMUST00000043767 Rfwd2Q9R1A8 733 aaKnown RBP23.34■■□□□ 1.33
Upf3a-201ENSMUST00000043767 Zfp839E9PUU5 921 aa23.33■■□□□ 1.33
Upf3a-201ENSMUST00000043767 Sept7O55131 436 aa23.33■■□□□ 1.33
Upf3a-201ENSMUST00000043767 PigrO70570 771 aa23.33■■□□□ 1.33
Upf3a-201ENSMUST00000043767 Gm5571P01639 130 aa23.33■■□□□ 1.33
Upf3a-201ENSMUST00000043767 Gcnt3Q5JCT0 437 aa23.33■■□□□ 1.33
Upf3a-201ENSMUST00000043767 Tbc1d1Q60949 1255 aa23.33■■□□□ 1.33
Upf3a-201ENSMUST00000043767 Cox8aQ64445 69 aa23.33■■□□□ 1.33
Upf3a-201ENSMUST00000043767 Q6DFW0 481 aa23.33■■□□□ 1.33
Upf3a-201ENSMUST00000043767 Ddx42Q810A7 929 aaKnown RBP23.33■■□□□ 1.33
Upf3a-201ENSMUST00000043767 Xylt1Q811B1 953 aa23.33■■□□□ 1.33
Upf3a-201ENSMUST00000043767 Usp43Q8BUM9 1132 aa23.33■■□□□ 1.33
Upf3a-201ENSMUST00000043767 PreplQ8C167 725 aa23.33■■□□□ 1.33
Upf3a-201ENSMUST00000043767 Ago1Q8CJG1 857 aaKnown RBP23.33■■□□□ 1.33
Upf3a-201ENSMUST00000043767 Reep3Q99KK1 254 aa23.33■■□□□ 1.33
Upf3a-201ENSMUST00000043767 Ubqln5Q9D4I8 510 aa23.33■■□□□ 1.33
Upf3a-201ENSMUST00000043767 Tmco5aQ9D9D5 303 aa23.33■■□□□ 1.33
Upf3a-201ENSMUST00000043767 Dusp21Q9D9D8 189 aa23.33■■□□□ 1.33
Upf3a-201ENSMUST00000043767 Serpine3E9Q6A2 401 aa23.32■■□□□ 1.32
Upf3a-201ENSMUST00000043767 Sar1aP36536 198 aa23.32■■□□□ 1.32
Upf3a-201ENSMUST00000043767 Dpf3P58269 378 aa23.32■■□□□ 1.32
Upf3a-201ENSMUST00000043767 Znf112Q0VAW7 879 aa23.32■■□□□ 1.32
Upf3a-201ENSMUST00000043767 Serpinb1cQ5SV42 375 aa23.32■■□□□ 1.32
Upf3a-201ENSMUST00000043767 Pwwp2aQ69Z61 730 aa23.32■■□□□ 1.32
Upf3a-201ENSMUST00000043767 Naaladl1Q7M758 745 aa23.32■■□□□ 1.32
Upf3a-201ENSMUST00000043767 Abcg2Q7TMS5 657 aa23.32■■□□□ 1.32
Upf3a-201ENSMUST00000043767 Wnk4Q80UE6 1222 aa23.32■■□□□ 1.32
Upf3a-201ENSMUST00000043767 Smad3Q8BUN5 425 aa23.32■■□□□ 1.32
Upf3a-201ENSMUST00000043767 Olfr847Q8VFF4 312 aa23.32■■□□□ 1.32
Upf3a-201ENSMUST00000043767 Sec14l2Q99J08 403 aa23.32■■□□□ 1.32
Upf3a-201ENSMUST00000043767 March2Q99M02 246 aa23.32■■□□□ 1.32
Upf3a-201ENSMUST00000043767 Zmynd10Q99ML0 440 aa23.32■■□□□ 1.32
Upf3a-201ENSMUST00000043767 Plod1Q9R0E2 728 aa23.32■■□□□ 1.32
Upf3a-201ENSMUST00000043767 Fibcd1A2AV25 459 aa23.32■■□□□ 1.32
Upf3a-201ENSMUST00000043767 Gm5689F6Y2A6 97 aa23.32■■□□□ 1.32
Upf3a-201ENSMUST00000043767 Eno1P17182 434 aaKnown RBP23.32■■□□□ 1.32
Upf3a-201ENSMUST00000043767 Ephb2P54763 986 aa23.32■■□□□ 1.32
Upf3a-201ENSMUST00000043767 Rps24P62849 133 aaKnown RBP23.32■■□□□ 1.32
Upf3a-201ENSMUST00000043767 Mylk3Q3UIZ8 795 aa23.32■■□□□ 1.32
Upf3a-201ENSMUST00000043767 CcnjlQ5SRT8 387 aa23.32■■□□□ 1.32
Upf3a-201ENSMUST00000043767 Pik3r5Q5SW28 871 aa23.32■■□□□ 1.32
Upf3a-201ENSMUST00000043767 Tdrd5Q5VCS6 1040 aa23.32■■□□□ 1.32
Upf3a-201ENSMUST00000043767 Phc1Q64028 1012 aa23.32■■□□□ 1.32
Upf3a-201ENSMUST00000043767 Kctd13Q8BGV7 329 aa23.32■■□□□ 1.32
Upf3a-201ENSMUST00000043767 Sik2Q8CFH6 931 aa23.32■■□□□ 1.32
Upf3a-201ENSMUST00000043767 HibchQ8QZS1 385 aa23.32■■□□□ 1.32
Upf3a-201ENSMUST00000043767 Nol6Q8R5K4 1152 aaKnown RBP23.32■■□□□ 1.32
Upf3a-201ENSMUST00000043767 Trim66Q924W6 1242 aa23.32■■□□□ 1.32
Upf3a-201ENSMUST00000043767 Cyp4f13Q99N19 523 aa23.32■■□□□ 1.32
Upf3a-201ENSMUST00000043767 CoprsQ9CQ13 173 aa23.32■■□□□ 1.32
Upf3a-201ENSMUST00000043767 Tmed5Q9CXE7 229 aa23.32■■□□□ 1.32
Upf3a-201ENSMUST00000043767 Q9DA42 136 aa23.32■■□□□ 1.32
Upf3a-201ENSMUST00000043767 Fzd2Q9JIP6 570 aa23.32■■□□□ 1.32
Upf3a-201ENSMUST00000043767 Igkv10-94A0A075B5L1 115 aa23.31■■□□□ 1.32
Upf3a-201ENSMUST00000043767 Hepacam2Q4VAH7 463 aa23.31■■□□□ 1.32
Upf3a-201ENSMUST00000043767 MafkQ61827 156 aa23.31■■□□□ 1.32
Upf3a-201ENSMUST00000043767 C1qtnf6Q6IR41 264 aa23.31■■□□□ 1.32
Upf3a-201ENSMUST00000043767 Epb41l5Q8BGS1 731 aa23.31■■□□□ 1.32
Upf3a-201ENSMUST00000043767 Olfm2Q8BM13 448 aa23.31■■□□□ 1.32
Upf3a-201ENSMUST00000043767 Sit1Q8C503 180 aa23.31■■□□□ 1.32
Upf3a-201ENSMUST00000043767 IqcdQ9D3V1 458 aa23.31■■□□□ 1.32
Upf3a-201ENSMUST00000043767 Nup210Q9QY81 1886 aaKnown RBP23.31■■□□□ 1.32
Upf3a-201ENSMUST00000043767 Prkag1O54950 330 aa23.31■■□□□ 1.32
Upf3a-201ENSMUST00000043767 Cldn2O88552 230 aa23.31■■□□□ 1.32
Upf3a-201ENSMUST00000043767 Ptpn1P35821 432 aa23.31■■□□□ 1.32
Upf3a-201ENSMUST00000043767 Gbp8Q2V6D6 525 aa23.31■■□□□ 1.32
Upf3a-201ENSMUST00000043767 Klhdc10Q6PAR0 439 aa23.31■■□□□ 1.32
Upf3a-201ENSMUST00000043767 Tas2r129Q7M709 320 aa23.31■■□□□ 1.32
Upf3a-201ENSMUST00000043767 Olfr698Q7TRN4 311 aa23.31■■□□□ 1.32
Upf3a-201ENSMUST00000043767 Arhgap12Q8C0D4 838 aa23.31■■□□□ 1.32
Upf3a-201ENSMUST00000043767 Lrrc14Q8VC16 493 aa23.31■■□□□ 1.32
Upf3a-201ENSMUST00000043767 Gprc5bQ923Z0 410 aa23.31■■□□□ 1.32
Upf3a-201ENSMUST00000043767 Ccdc103Q9D9P2 237 aa23.31■■□□□ 1.32
Upf3a-201ENSMUST00000043767 TriobpQ99KW3 2014 aa23.31■■□□□ 1.32
Upf3a-201ENSMUST00000043767 Sp1O89090 784 aa23.3■■□□□ 1.32
Upf3a-201ENSMUST00000043767 Gdf5P43027 495 aa23.3■■□□□ 1.32
Upf3a-201ENSMUST00000043767 CenpcP49452 906 aaKnown RBP23.3■■□□□ 1.32
Upf3a-201ENSMUST00000043767 CstaP56567 97 aa23.3■■□□□ 1.32
Upf3a-201ENSMUST00000043767 Trim43bP86448 445 aa23.3■■□□□ 1.32
Upf3a-201ENSMUST00000043767 Ccdc138Q0VF22 680 aa23.3■■□□□ 1.32
Upf3a-201ENSMUST00000043767 Sap25Q1EHW4 186 aa23.3■■□□□ 1.32
Upf3a-201ENSMUST00000043767 Ubr7Q8BU04 425 aa23.3■■□□□ 1.32
Upf3a-201ENSMUST00000043767 HpdlQ8K248 371 aa23.3■■□□□ 1.32
Upf3a-201ENSMUST00000043767 Sec63Q8VHE0 760 aaKnown RBP23.3■■□□□ 1.32
Upf3a-201ENSMUST00000043767 Elmod3Q91YP6 381 aa23.3■■□□□ 1.32
Upf3a-201ENSMUST00000043767 Mrps17Q9CQE3 120 aaKnown RBP23.3■■□□□ 1.32
Upf3a-201ENSMUST00000043767 Plscr2Q9DCW2 307 aa23.3■■□□□ 1.32
Retrieved 100 of 22,080 RNA–protein pairs in 31.8 ms