RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 Atp2a2O55143 1044 aaKnown RBP8.88□□□□□ -0.99
Trim39-201ENSMUST00000042717 HcrtO55241 130 aa8.88□□□□□ -0.99
Trim39-201ENSMUST00000042717 Sp1O89090 784 aa8.88□□□□□ -0.99
Trim39-201ENSMUST00000042717 Rfc1P35601 1131 aa8.88□□□□□ -0.99
Trim39-201ENSMUST00000042717 Creb1Q01147 341 aaKnown RBP8.88□□□□□ -0.99
Trim39-201ENSMUST00000042717 Mc1rQ01727 315 aa8.88□□□□□ -0.99
Trim39-201ENSMUST00000042717 Eml1Q05BC3 814 aa8.88□□□□□ -0.99
Trim39-201ENSMUST00000042717 Trmt10cQ3UFY8 414 aaKnown RBP8.88□□□□□ -0.99
Trim39-201ENSMUST00000042717 Ccdc185Q3V118 621 aa8.88□□□□□ -0.99
Trim39-201ENSMUST00000042717 Tmem255bQ5FW56 369 aa8.88□□□□□ -0.99
Trim39-201ENSMUST00000042717 Soat1Q61263 540 aa8.88□□□□□ -0.99
Trim39-201ENSMUST00000042717 Nlrp4eQ66X19 978 aa8.88□□□□□ -0.99
Trim39-201ENSMUST00000042717 C1qtnf6Q6IR41 264 aa8.88□□□□□ -0.99
Trim39-201ENSMUST00000042717 LnpkQ7TQ95 425 aa8.88□□□□□ -0.99
Trim39-201ENSMUST00000042717 NfascQ810U3 1240 aa8.88□□□□□ -0.99
Trim39-201ENSMUST00000042717 Zfp719Q8BIV1 735 aa8.88□□□□□ -0.99
Trim39-201ENSMUST00000042717 MylipQ8BM54 445 aa8.88□□□□□ -0.99
Trim39-201ENSMUST00000042717 Spats2Q8K1N4 545 aaKnown RBP8.88□□□□□ -0.99
Trim39-201ENSMUST00000042717 Elmod3Q91YP6 381 aa8.88□□□□□ -0.99
Trim39-201ENSMUST00000042717 Rpl34Q9D1R9 117 aaKnown RBP8.88□□□□□ -0.99
Trim39-201ENSMUST00000042717 Prmt1Q9JIF0 371 aa8.88□□□□□ -0.99
Trim39-201ENSMUST00000042717 PolhQ9JJN0 694 aa8.88□□□□□ -0.99
Trim39-201ENSMUST00000042717 Aldh18a1Q9Z110 795 aa8.88□□□□□ -0.99
Trim39-201ENSMUST00000042717 Gm8257E9Q8R3 264 aa8.87□□□□□ -0.99
Trim39-201ENSMUST00000042717 Morc3F7BJB9 942 aaKnown RBP8.87□□□□□ -0.99
Trim39-201ENSMUST00000042717 Fignl2J3QK54 644 aa8.87□□□□□ -0.99
Trim39-201ENSMUST00000042717 AgxtO35423 414 aa8.87□□□□□ -0.99
Trim39-201ENSMUST00000042717 Slc27a2O35488 620 aa8.87□□□□□ -0.99
Trim39-201ENSMUST00000042717 MipP51180 263 aa8.87□□□□□ -0.99
Trim39-201ENSMUST00000042717 Smpdl3bP58242 456 aa8.87□□□□□ -0.99
Trim39-201ENSMUST00000042717 PhbP67778 272 aaKnown RBP8.87□□□□□ -0.99
Trim39-201ENSMUST00000042717 Fam107bQ3TGF2 131 aa8.87□□□□□ -0.99
Trim39-201ENSMUST00000042717 RhocQ62159 193 aa8.87□□□□□ -0.99
Trim39-201ENSMUST00000042717 Cox8aQ64445 69 aa8.87□□□□□ -0.99
Trim39-201ENSMUST00000042717 Ehbp1Q69ZW3 1231 aa8.87□□□□□ -0.99
Trim39-201ENSMUST00000042717 DgkqQ6P5E8 934 aa8.87□□□□□ -0.99
Trim39-201ENSMUST00000042717 Ldlrap1Q8C142 308 aa8.87□□□□□ -0.99
Trim39-201ENSMUST00000042717 Asb14Q8C6Y6 587 aa8.87□□□□□ -0.99
Trim39-201ENSMUST00000042717 Ppp4r1Q8K2V1 951 aa8.87□□□□□ -0.99
Trim39-201ENSMUST00000042717 Setd7Q8VHL1 366 aa8.87□□□□□ -0.99
Trim39-201ENSMUST00000042717 Pcdhb18Q91Y02 792 aa8.87□□□□□ -0.99
Trim39-201ENSMUST00000042717 Mcoln1Q99J21 580 aa8.87□□□□□ -0.99
Trim39-201ENSMUST00000042717 Znf654Q9DAU9 571 aa8.87□□□□□ -0.99
Trim39-201ENSMUST00000042717 Adamts5Q9R001 930 aa8.87□□□□□ -0.99
Trim39-201ENSMUST00000042717 Kat6aQ8BZ21 2003 aa8.87□□□□□ -0.99
Trim39-201ENSMUST00000042717 Plxna3P70208 1872 aa8.87□□□□□ -0.99
Trim39-201ENSMUST00000042717 Olfm1O88998 485 aa8.87□□□□□ -0.99
Trim39-201ENSMUST00000042717 Il3P01586 166 aa8.87□□□□□ -0.99
Trim39-201ENSMUST00000042717 Krt10P02535 570 aa8.87□□□□□ -0.99
Trim39-201ENSMUST00000042717 Nfkb1P25799 971 aa8.87□□□□□ -0.99
Trim39-201ENSMUST00000042717 Kif5cP28738 956 aaKnown RBP8.87□□□□□ -0.99
Trim39-201ENSMUST00000042717 Mmp13P33435 472 aa8.87□□□□□ -0.99
Trim39-201ENSMUST00000042717 Nudt1P53368 156 aa8.87□□□□□ -0.99
Trim39-201ENSMUST00000042717 Epas1P97481 874 aa8.87□□□□□ -0.99
Trim39-201ENSMUST00000042717 Gjb5Q02739 271 aa8.87□□□□□ -0.99
Trim39-201ENSMUST00000042717 PrlrQ08501 608 aa8.87□□□□□ -0.99
Trim39-201ENSMUST00000042717 Lrriq3Q14DL3 633 aa8.87□□□□□ -0.99
Trim39-201ENSMUST00000042717 Ephx3Q3V1F8 367 aa8.87□□□□□ -0.99
Trim39-201ENSMUST00000042717 1810049J17RikQ3V2G9 153 aa8.87□□□□□ -0.99
Trim39-201ENSMUST00000042717 Taar7eQ5QD09 358 aa8.87□□□□□ -0.99
Trim39-201ENSMUST00000042717 Pnma8aQ80VM8 430 aa8.87□□□□□ -0.99
Trim39-201ENSMUST00000042717 Kctd13Q8BGV7 329 aa8.87□□□□□ -0.99
Trim39-201ENSMUST00000042717 Rps6kc1Q8BLK9 1056 aa8.87□□□□□ -0.99
Trim39-201ENSMUST00000042717 Psapl1Q8C1C1 522 aa8.87□□□□□ -0.99
Trim39-201ENSMUST00000042717 Zfp263Q8CF60 680 aa8.87□□□□□ -0.99
Trim39-201ENSMUST00000042717 P3h4Q8K2B0 443 aa8.87□□□□□ -0.99
Trim39-201ENSMUST00000042717 Vmn1r18Q8R2C8 299 aa8.87□□□□□ -0.99
Trim39-201ENSMUST00000042717 ClmpQ8R373 373 aa8.87□□□□□ -0.99
Trim39-201ENSMUST00000042717 Wnt9aQ8R5M2 365 aa8.87□□□□□ -0.99
Trim39-201ENSMUST00000042717 Ubqln5Q9D4I8 510 aa8.87□□□□□ -0.99
Trim39-201ENSMUST00000042717 Ascc1Q9D8Z1 356 aaKnown RBP8.87□□□□□ -0.99
Trim39-201ENSMUST00000042717 Vwa8Q8CC88 1905 aa8.86□□□□□ -0.99
Trim39-201ENSMUST00000042717 Olfr1049A2ARZ0 308 aa8.86□□□□□ -0.99
Trim39-201ENSMUST00000042717 Kcnk16G5E845 292 aa8.86□□□□□ -0.99
Trim39-201ENSMUST00000042717 Spin2fJ3QPU0 254 aa8.86□□□□□ -0.99
Trim39-201ENSMUST00000042717 Fgf10O35565 209 aa8.86□□□□□ -0.99
Trim39-201ENSMUST00000042717 Ptch2O35595 1182 aa8.86□□□□□ -0.99
Trim39-201ENSMUST00000042717 Sdc4O35988 198 aaKnown RBP8.86□□□□□ -0.99
Trim39-201ENSMUST00000042717 TshrP47750 764 aa8.86□□□□□ -0.99
Trim39-201ENSMUST00000042717 CenpcP49452 906 aaKnown RBP8.86□□□□□ -0.99
Trim39-201ENSMUST00000042717 Drc1Q3USS3 753 aa8.86□□□□□ -0.99
Trim39-201ENSMUST00000042717 Prss53Q571E5 552 aa8.86□□□□□ -0.99
Trim39-201ENSMUST00000042717 Sco1Q5SUC9 284 aa8.86□□□□□ -0.99
Trim39-201ENSMUST00000042717 Lcp1Q61233 627 aaKnown RBP8.86□□□□□ -0.99
Trim39-201ENSMUST00000042717 Adat2Q6P6J0 191 aa8.86□□□□□ -0.99
Trim39-201ENSMUST00000042717 Rxfp4Q7TQP4 414 aa8.86□□□□□ -0.99
Trim39-201ENSMUST00000042717 Snx30Q8CE50 437 aa8.86□□□□□ -0.99
Trim39-201ENSMUST00000042717 Pitrm1Q8K411 1036 aaKnown RBP8.86□□□□□ -0.99
Trim39-201ENSMUST00000042717 Tasp1Q8R1G1 420 aa8.86□□□□□ -0.99
Trim39-201ENSMUST00000042717 FtcdQ91XD4 541 aa8.86□□□□□ -0.99
Trim39-201ENSMUST00000042717 Acot13Q9CQR4 140 aa8.86□□□□□ -0.99
Trim39-201ENSMUST00000042717 Rfwd2Q9R1A8 733 aaKnown RBP8.86□□□□□ -0.99
Trim39-201ENSMUST00000042717 6720489N17RikA0A1Y7VJW0 127 aa8.86□□□□□ -0.99
Trim39-201ENSMUST00000042717 Ralgps1A2AR50 585 aa8.86□□□□□ -0.99
Trim39-201ENSMUST00000042717 Nlgn4lB0F2B4 945 aa8.86□□□□□ -0.99
Trim39-201ENSMUST00000042717 Ldlrad1D3YYZ1 218 aa8.86□□□□□ -0.99
Trim39-201ENSMUST00000042717 Gm5930D3Z257 264 aa8.86□□□□□ -0.99
Trim39-201ENSMUST00000042717 Znf683I7HJS4 458 aa8.86□□□□□ -0.99
Trim39-201ENSMUST00000042717 AvilO88398 819 aa8.86□□□□□ -0.99
Trim39-201ENSMUST00000042717 LifP09056 203 aa8.86□□□□□ -0.99
Retrieved 100 of 22,080 RNA–protein pairs in 25.1 ms