RNA–Protein interactions for RNA: ENSMUST00000030992.12

Rnf4-201, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 2,895 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-201ENSMUST00000030992 Krt6aP50446 553 aa12.93□□□□□ -0.34
Rnf4-201ENSMUST00000030992 PolgP54099 1218 aa12.93□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Echdc2Q3TLP5 296 aa12.93□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Mfsd3Q5U419 412 aa12.93□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Mxd4Q60948 209 aa12.93□□□□□ -0.34
Rnf4-201ENSMUST00000030992 MafkQ61827 156 aa12.93□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Zfp90Q61967 636 aa12.93□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Mea1Q64327 174 aa12.93□□□□□ -0.34
Rnf4-201ENSMUST00000030992 MyorgQ69ZQ1 716 aa12.93□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Zfp512bQ6PHP4 879 aa12.93□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Pan2Q8BGF7 1200 aaKnown RBP12.93□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Nup85Q8R480 656 aaKnown RBP12.93□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Rabep2Q91WG2 554 aa12.93□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Npffr2Q924H0 417 aa12.93□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Ndc80Q9D0F1 642 aaKnown RBP12.93□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Actrt1Q9D9J3 376 aa12.93□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Grm3Q9QYS2 879 aa12.93□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Usp34Q6ZQ93 3582 aa12.92□□□□□ -0.34
Rnf4-201ENSMUST00000030992 1700001O22RikA2APZ1 375 aa12.92□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Ttll11A4Q9F4 727 aa12.92□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Gm20509G3UZF1 325 aa12.92□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Zfp275G3X904 499 aa12.92□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Stmn2P55821 179 aa12.92□□□□□ -0.34
Rnf4-201ENSMUST00000030992 B3gat3P58158 335 aa12.92□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Yy1Q00899 414 aa12.92□□□□□ -0.34
Rnf4-201ENSMUST00000030992 P3h1Q3V1T4 739 aa12.92□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Proser1Q5PRE5 913 aa12.92□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Six4Q61321 775 aa12.92□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Olfr1415Q7TQS4 311 aa12.92□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Zcchc4Q8BKW4 512 aa12.92□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Tbc1d17Q8BYH7 645 aa12.92□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Fnbp1lQ8K012 605 aa12.92□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Mul1Q8VCM5 352 aa12.92□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Olfr1416Q8VGU4 312 aa12.92□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Tcf7l2Q924A0 459 aa12.92□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Tomm20lQ9D4V6 152 aa12.92□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Slfn2Q9Z0I6 378 aa12.92□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Igkv5-45A0A0B4J1J1 115 aa12.92□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Olfr1023A2ASU6 311 aa12.92□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Fpr-rs4A4FUQ5 323 aa12.92□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Gm3002E9PW72 216 aa12.92□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Prf1P10820 554 aa12.92□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Fen1P39749 378 aa12.92□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Kpna2P52293 529 aaKnown RBP12.92□□□□□ -0.34
Rnf4-201ENSMUST00000030992 CstaP56567 97 aa12.92□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Brms1lQ3U1T3 323 aa12.92□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Olfr464Q5SW48 313 aa12.92□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Rasa4Q6PFQ7 802 aa12.92□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Far2Q7TNT2 515 aa12.92□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Pcmtd2Q8BHD8 359 aa12.92□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Tmem220Q8BP07 167 aa12.92□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Ano4Q8C5H1 955 aa12.92□□□□□ -0.34
Rnf4-201ENSMUST00000030992 LipmQ8K2A6 422 aa12.92□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Atpaf2Q91YY4 289 aa12.92□□□□□ -0.34
Rnf4-201ENSMUST00000030992 AenQ9CZI9 336 aaKnown RBP12.92□□□□□ -0.34
Rnf4-201ENSMUST00000030992 RhojQ9ER71 214 aa12.92□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Rbck1Q9WUB0 508 aa12.92□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Slc6a21A0A1B0GSD2 748 aa12.91□□□□□ -0.34
Rnf4-201ENSMUST00000030992 4930469K13RikA0A286YDB2 92 aa12.91□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Vmn2r27D3YUK6 857 aa12.91□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Akap5D3YVF0 745 aa12.91□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Adamts14E9PX39 1209 aa12.91□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Zbtb11G5E8B9 1050 aaKnown RBP12.91□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Olfr603L7N1Y4 312 aa12.91□□□□□ -0.34
Rnf4-201ENSMUST00000030992 EsrraO08580 422 aa12.91□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Prl3b1P09586 222 aa12.91□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Scd1P13516 355 aa12.91□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Cdh9P70407 786 aa12.91□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Mc1rQ01727 315 aa12.91□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Lrrn4clQ3TYX2 239 aa12.91□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Arcn1Q5XJY5 511 aaKnown RBP12.91□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Mtnr1aQ61184 353 aa12.91□□□□□ -0.34
Rnf4-201ENSMUST00000030992 RgnQ64374 299 aa12.91□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Tbx10Q810F8 385 aa12.91□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Slco2b1Q8BXB6 683 aa12.91□□□□□ -0.34
Rnf4-201ENSMUST00000030992 ItchQ8C863 864 aa12.91□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Sugp1Q8CH02 643 aaKnown RBP12.91□□□□□ -0.34
Rnf4-201ENSMUST00000030992 CopaQ8CIE6 1224 aaKnown RBP12.91□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Abcg3Q99P81 650 aa12.91□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Arpc2Q9CVB6 300 aa12.91□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Oxct2bQ9ESL0 520 aa12.91□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Slc12a4Q9JIS8 1085 aa12.91□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Oxct2aQ9JJN4 520 aa12.91□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Shcbp1Q9Z179 668 aa12.91□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Bnip3lQ9Z2F7 218 aa12.91□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Kbtbd2G3X9X1 623 aa12.91□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Arfip1G5E8V9 373 aa12.91□□□□□ -0.34
Rnf4-201ENSMUST00000030992 StacP97306 403 aa12.91□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Cpne7Q0VE82 557 aa12.91□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Hbq1bQ3U0A6 142 aa12.91□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Heatr9Q5QNV8 569 aa12.91□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Foxd4Q60688 444 aa12.91□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Dnajc1Q61712 552 aaKnown RBP12.91□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Xlr3cQ61806 226 aa12.91□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Trim62Q80V85 475 aa12.91□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Pxylp1Q8BHA9 480 aa12.91□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Ldhal6bQ8BVP2 382 aa12.91□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Gfm2Q8R2Q4 779 aa12.91□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Rnh1Q91VI7 456 aa12.91□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Smim14Q91VT8 99 aa12.91□□□□□ -0.34
Retrieved 100 of 22,080 RNA–protein pairs in 52.6 ms