RNA–Protein interactions for RNA: ENSMUST00000030586.14

Ccdc28b-201, Transcript of Coiled-coil domain-containing protein 28B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc28b, Length 879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28b-201ENSMUST00000030586 Nlrp4aQ8BU40 982 aa11.62□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Trerf1Q8BXJ2 1205 aa11.62□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Apol7cQ8C6E1 369 aa11.62□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 4921504E06RikQ8CET2 560 aa11.62□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 MfrpQ8K480 584 aa11.62□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Vsx1Q91V10 363 aa11.62□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 HnrnpllQ921F4 591 aaKnown RBP11.62□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Xpo6Q924Z6 1125 aa11.62□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Exoc2Q9D4H1 924 aa11.62□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Mpp6Q9JLB0 553 aa11.62□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Atp11cQ9QZW0 1129 aa11.62□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Nfs1Q9Z1J3 459 aa11.62□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Ssxb9A2BI93 185 aa11.61□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Gm2030D3Z7C4 212 aa11.61□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Cilp2D3Z7H8 1162 aa11.61□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Gcom1E9PZ54 550 aa11.61□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Zfp169E9Q3R6 731 aa11.61□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Gm7073E9QAS1 335 aa11.61□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Mroh9G5E8L9 891 aa11.61□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 BC024978J3QPC3 361 aa11.61□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Soat2O88908 525 aa11.61□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 MpoP11247 718 aa11.61□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 PnpP23492 289 aa11.61□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Htr7P32304 448 aa11.61□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Htr2cP34968 459 aa11.61□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Lbx1P52955 282 aa11.61□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Rps14P62264 151 aaKnown RBP11.61□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Neurog2P70447 263 aa11.61□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Ncf4P97369 339 aa11.61□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Vps45P97390 570 aa11.61□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Krt86P97861 486 aa11.61□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Faf2Q3TDN2 445 aa11.61□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Osgin2Q3TEE9 550 aa11.61□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Lmf1Q3U3R4 574 aa11.61□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Tnks2Q3UES3 1166 aa11.61□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Taar8aQ5QD07 344 aa11.61□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Six4Q61321 775 aa11.61□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Olfr1057Q7TR75 315 aa11.61□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Kcnf1Q7TSH7 493 aa11.61□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Nrde2Q80XC6 1172 aa11.61□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Rspo2Q8BFU0 243 aa11.61□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Cox15Q8BJ03 413 aa11.61□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Slc13a4Q8BZ82 625 aa11.61□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Psapl1Q8C1C1 522 aa11.61□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Fam193aQ8CGI1 1231 aaKnown RBP11.61□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Nop14Q8R3N1 860 aaKnown RBP11.61□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Olfr1019Q8VGS3 310 aa11.61□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Serpina3nQ91WP6 418 aa11.61□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Arhgef3Q91X46 524 aa11.61□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Kdelr1Q99JH8 212 aa11.61□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Mrfap1Q9CQL7 125 aa11.61□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Fcf1Q9CTH6 198 aa11.61□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Rmi1Q9D4G9 616 aa11.61□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Capn9Q9D805 690 aa11.61□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Elovl2Q9JLJ4 292 aa11.61□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Trim44Q9QXA7 346 aa11.61□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Grk1Q9WVL4 564 aa11.61□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Cacna1eQ61290 2272 aa11.6□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Fbxo47A2A6H3 451 aa11.6□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Bclaf3A2AG58 752 aaKnown RBP11.6□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Atp8b4A2ANX3 1194 aa11.6□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Tcte1A6H639 498 aa11.6□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Gm16430A6X8J1 155 aa11.6□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Srsf11E9Q6E5 511 aaKnown RBP11.6□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Vmn2r88L7N1W8 857 aa11.6□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Ap3d1O54774 1199 aa11.6□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 LgmnO89017 435 aa11.6□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Slc1a1P51906 523 aa11.6□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Ndst2P52850 883 aa11.6□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 PrkcgP63318 697 aa11.6□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Casp4P70343 373 aa11.6□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Ano9P86044 747 aa11.6□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 CtscP97821 462 aa11.6□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Fam47cQ14BE7 430 aa11.6□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 CtrcQ3SYP2 268 aa11.6□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Itpripl2Q3UV16 535 aa11.6□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Grm5Q3UVX5 1203 aa11.6□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Gpr149Q3UVY1 732 aa11.6□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Tubal3Q3UX10 446 aa11.6□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Nxf2Q4ZGD8 691 aa11.6□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Tmem45aQ60774 273 aa11.6□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Trim21Q62191 470 aa11.6□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 SyncripQ7TMK9 623 aaKnown RBP11.6□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Cdkn3Q810P3 211 aa11.6□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Sphk1Q8CI15 382 aa11.6□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Ugt3a2Q8JZZ0 523 aa11.6□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 RhoqQ8R527 205 aa11.6□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Arl8aQ8VEH3 186 aa11.6□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Mlc1Q8VHK5 382 aa11.6□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Ddx1Q91VR5 740 aaKnown RBP11.6□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Atpaf2Q91YY4 289 aa11.6□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 DynapQ9D7M5 161 aa11.6□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 MkksQ9JI70 570 aa11.6□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Thap11Q9JJD0 305 aa11.6□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Spry4Q9WTP2 300 aa11.6□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Map3k6Q9WTR2 1291 aa11.6□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Slfn2Q9Z0I6 378 aa11.6□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Dio2Q9Z1Y9 266 aa11.6□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Dmxl1Q6PNC0 3013 aa11.59□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Cisd3B1AR13 137 aa11.59□□□□□ -0.55
Retrieved 100 of 22,080 RNA–protein pairs in 28.1 ms