RNA–Protein interactions for RNA: ENSMUST00000028728.5

Ubr1-201, Transcript of E3 ubiquitin-protein ligase UBR1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubr1, Length 7,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1-201ENSMUST00000028728 Tbc1d22aQ8R5A6 516 aa10.29□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Olfr1502Q8VG66 316 aa10.29□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Sec16bQ91XT4 1051 aa10.29□□□□□ -0.76
Ubr1-201ENSMUST00000028728 PompQ9CQT5 141 aa10.29□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Cpxm2Q9D2L5 764 aa10.29□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Il13ra2O88786 383 aa10.28□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Aldh3a1P47739 453 aa10.28□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Cyp2c37P56654 490 aa10.28□□□□□ -0.76
Ubr1-201ENSMUST00000028728 MylpfP97457 169 aa10.28□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Trappc3lQ4KL14 181 aa10.28□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Mylk4Q5SUV5 386 aa10.28□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Zmym6Q8BS54 1249 aa10.28□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Mta1Q8K4B0 715 aaKnown RBP10.28□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Dcaf8Q8N7N5 591 aa10.28□□□□□ -0.76
Ubr1-201ENSMUST00000028728 LbpQ61805 481 aa10.28□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Ppp2r1bQ7TNP2 601 aaKnown RBP10.28□□□□□ -0.76
Ubr1-201ENSMUST00000028728 RtknQ8C6B2 564 aa10.28□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Mid2Q9QUS6 705 aa10.28□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Lmtk3Q5XJV6 1424 aa10.28□□□□□ -0.76
Ubr1-201ENSMUST00000028728 OsmrO70458 971 aa10.28□□□□□ -0.76
Ubr1-201ENSMUST00000028728 IapP03975 557 aa10.28□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Fdxacb1Q3UY23 622 aa10.28□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Mup20Q5FW60 181 aa10.28□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Lag3Q61790 521 aa10.28□□□□□ -0.76
Ubr1-201ENSMUST00000028728 DgkqQ6P5E8 934 aa10.28□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Gm2163Q6PCY5 473 aa10.28□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Slc39a14Q75N73 489 aa10.28□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Dpp9Q8BVG4 862 aa10.28□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Dus1lQ8C2P3 475 aa10.28□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Panx3Q8CEG0 392 aa10.28□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Nckap1lQ8K1X4 1134 aa10.28□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Scd3Q99PL7 359 aa10.28□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Dnajc5bQ9CQ94 199 aa10.28□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Trim39Q9ESN2 488 aa10.28□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Chrna9G3X8Z7 479 aa10.28□□□□□ -0.76
Ubr1-201ENSMUST00000028728 AgxtO35423 414 aa10.28□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Hsd17b7O88736 334 aa10.28□□□□□ -0.76
Ubr1-201ENSMUST00000028728 CcnoP0C242 352 aa10.28□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Thoc7Q7TMY4 204 aaKnown RBP10.28□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Pbld2Q9CXN7 288 aa10.28□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Gm4985A2ALC6 410 aa10.28□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Gm12794L7MTS5 483 aa10.28□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Psmb4P99026 264 aa10.28□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Grik1Q60934 836 aa10.28□□□□□ -0.76
Ubr1-201ENSMUST00000028728 HadhQ61425 314 aa10.28□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Pomgnt2Q8BW41 605 aa10.28□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Kat5Q8CHK4 513 aa10.28□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Mul1Q8VCM5 352 aa10.28□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Ttc39cQ8VE09 580 aa10.28□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Dnaja2Q9QYJ0 412 aa10.28□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Efcab12V9GXH0 673 aa10.28□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Gm21964A0A1W2P7S4 437 aa10.28□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Olfr521E9Q519 321 aa10.28□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Dnase1l3O55070 310 aa10.28□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Glb1P23780 647 aa10.28□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Afg1lQ3V384 480 aa10.28□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Atp13a3Q5XF89 1219 aa10.28□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Lcp1Q61233 627 aaKnown RBP10.28□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Efr3bQ6ZQ18 817 aa10.28□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Trub1Q8C0D0 338 aaKnown RBP10.28□□□□□ -0.76
Ubr1-201ENSMUST00000028728 4931406P16RikQ8C5X1 1059 aa10.28□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Dmtf1Q8CE22 761 aa10.28□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Kat2aQ9JHD2 830 aa10.28□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Magel2Q9QZ04 1284 aa10.28□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Ak1Q9R0Y5 194 aa10.28□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Gm13128L7MU96 475 aa10.27□□□□□ -0.76
Ubr1-201ENSMUST00000028728 AlplP09242 524 aa10.27□□□□□ -0.76
Ubr1-201ENSMUST00000028728 AurkaP97477 395 aa10.27□□□□□ -0.76
Ubr1-201ENSMUST00000028728 D630036H23RikQ3UQD6 204 aa10.27□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Sfmbt2Q5DTW2 938 aa10.27□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Fbxw2Q60584 422 aa10.27□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Tmem45aQ60774 273 aa10.27□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Fscn1Q61553 493 aa10.27□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Rbm22Q8BHS3 420 aaKnown RBP10.27□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Hdac7Q8C2B3 938 aa10.27□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Olfr809Q8VEX8 328 aa10.27□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Lrrc4Q99PH1 652 aa10.27□□□□□ -0.76
Ubr1-201ENSMUST00000028728 TfebQ9R210 475 aa10.27□□□□□ -0.76
Ubr1-201ENSMUST00000028728 Kif1cO35071 1100 aaKnown RBP10.27□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Fgfr1P16092 822 aa10.27□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Lrrn4P59383 733 aa10.27□□□□□ -0.77
Ubr1-201ENSMUST00000028728 YwhazP63101 245 aaKnown RBP10.27□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Smim24Q0VG18 120 aa10.27□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Trim45Q6PFY8 580 aa10.27□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Abi3Q8BYZ1 367 aa10.27□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Lamtor4Q8CF66 99 aa10.27□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Epsti1Q8VDI1 314 aa10.27□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Eif3mQ99JX4 374 aa10.27□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Hnrnpa0Q9CX86 305 aaKnown RBP10.27□□□□□ -0.77
Ubr1-201ENSMUST00000028728 DmgdhQ9DBT9 869 aa10.27□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Vmn2r25W4VSP2 855 aa10.27□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Serpinb9cI7HJI5 387 aa10.27□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Nek2O35942 443 aa10.27□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Stra6O70491 670 aa10.27□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Lta4hP24527 611 aa10.27□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Pold1P52431 1105 aa10.27□□□□□ -0.77
Ubr1-201ENSMUST00000028728 OsbpQ3B7Z2 805 aa10.27□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Zfp868Q3UTQ6 422 aa10.27□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Lcp2Q60787 533 aaKnown RBP10.27□□□□□ -0.77
Ubr1-201ENSMUST00000028728 Vsx2Q61412 361 aa10.27□□□□□ -0.77
Retrieved 100 of 22,080 RNA–protein pairs in 25.6 ms