RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 Msi2Q920Q6 346 aaKnown RBP16.71■□□□□ 0.27
Shh-201ENSMUST00000002708 Cyp4f16Q99N17 524 aa16.71■□□□□ 0.27
Shh-201ENSMUST00000002708 Spata9Q9D9R3 252 aa16.71■□□□□ 0.27
Shh-201ENSMUST00000002708 MrgbpQ9DAT2 204 aa16.71■□□□□ 0.27
Shh-201ENSMUST00000002708 Tubd1Q9R1K7 455 aa16.71■□□□□ 0.27
Shh-201ENSMUST00000002708 Tagln3Q9R1Q8 199 aa16.71■□□□□ 0.27
Shh-201ENSMUST00000002708 Map3k6Q9WTR2 1291 aa16.71■□□□□ 0.27
Shh-201ENSMUST00000002708 Mapk13Q9Z1B7 366 aa16.71■□□□□ 0.27
Shh-201ENSMUST00000002708 Adgra2Q91ZV8 1336 aa16.71■□□□□ 0.27
Shh-201ENSMUST00000002708 NuggcD3YWJ0 796 aa16.7■□□□□ 0.26
Shh-201ENSMUST00000002708 C1qbpO35658 278 aa16.7■□□□□ 0.26
Shh-201ENSMUST00000002708 Il2P04351 169 aa16.7■□□□□ 0.26
Shh-201ENSMUST00000002708 FynP39688 537 aa16.7■□□□□ 0.26
Shh-201ENSMUST00000002708 Krt6aP50446 553 aa16.7■□□□□ 0.26
Shh-201ENSMUST00000002708 Ano7Q14AT5 859 aa16.7■□□□□ 0.26
Shh-201ENSMUST00000002708 Hsdl2Q2TPA8 490 aaKnown RBP16.7■□□□□ 0.26
Shh-201ENSMUST00000002708 Coq10bQ3THF9 240 aa16.7■□□□□ 0.26
Shh-201ENSMUST00000002708 MyrfQ3UR85 1138 aa16.7■□□□□ 0.26
Shh-201ENSMUST00000002708 Plcl1Q3USB7 1096 aa16.7■□□□□ 0.26
Shh-201ENSMUST00000002708 Znf821Q6PD05 413 aa16.7■□□□□ 0.26
Shh-201ENSMUST00000002708 Rad9bQ6WBX7 403 aa16.7■□□□□ 0.26
Shh-201ENSMUST00000002708 Olfr798Q7TRH8 311 aa16.7■□□□□ 0.26
Shh-201ENSMUST00000002708 Fads6Q80UG1 342 aa16.7■□□□□ 0.26
Shh-201ENSMUST00000002708 StgQ8BM15 349 aa16.7■□□□□ 0.26
Shh-201ENSMUST00000002708 Osbpl6Q8BXR9 959 aa16.7■□□□□ 0.26
Shh-201ENSMUST00000002708 Pcdhb2Q91Y00 799 aa16.7■□□□□ 0.26
Shh-201ENSMUST00000002708 MrgpreQ91ZB7 310 aa16.7■□□□□ 0.26
Shh-201ENSMUST00000002708 Katnbl1Q9CWJ3 299 aa16.7■□□□□ 0.26
Shh-201ENSMUST00000002708 Pgm3Q9CYR6 542 aa16.7■□□□□ 0.26
Shh-201ENSMUST00000002708 Mgrn1Q9D074 532 aa16.7■□□□□ 0.26
Shh-201ENSMUST00000002708 Arl2Q9D0J4 184 aa16.7■□□□□ 0.26
Shh-201ENSMUST00000002708 Fam227aQ9D3V8 625 aa16.7■□□□□ 0.26
Shh-201ENSMUST00000002708 Gpc1Q9QZF2 557 aa16.7■□□□□ 0.26
Shh-201ENSMUST00000002708 Ptchd4B9EKX1 904 aa16.7■□□□□ 0.26
Shh-201ENSMUST00000002708 Zfp384E9Q1A5 584 aaKnown RBP16.7■□□□□ 0.26
Shh-201ENSMUST00000002708 E230025N22RikG5E8S3 482 aa16.7■□□□□ 0.26
Shh-201ENSMUST00000002708 Neu1O35657 409 aa16.7■□□□□ 0.26
Shh-201ENSMUST00000002708 Adam19O35674 920 aa16.7■□□□□ 0.26
Shh-201ENSMUST00000002708 Dnmt3aO88508 908 aaKnown RBP16.7■□□□□ 0.26
Shh-201ENSMUST00000002708 Irs1P35569 1233 aa16.7■□□□□ 0.26
Shh-201ENSMUST00000002708 Btg3P50615 252 aa16.7■□□□□ 0.26
Shh-201ENSMUST00000002708 Hoxb13P70321 286 aa16.7■□□□□ 0.26
Shh-201ENSMUST00000002708 NxnP97346 435 aa16.7■□□□□ 0.26
Shh-201ENSMUST00000002708 Tmem237Q3V0J1 427 aa16.7■□□□□ 0.26
Shh-201ENSMUST00000002708 9930111J21Rik1Q5SVP0 844 aa16.7■□□□□ 0.26
Shh-201ENSMUST00000002708 Cyp3a13Q64464 503 aa16.7■□□□□ 0.26
Shh-201ENSMUST00000002708 DcstampQ7TNJ0 470 aa16.7■□□□□ 0.26
Shh-201ENSMUST00000002708 Pdk1Q8BFP9 434 aaKnown RBP16.7■□□□□ 0.26
Shh-201ENSMUST00000002708 Clasp2Q8BRT1 1286 aaKnown RBP16.7■□□□□ 0.26
Shh-201ENSMUST00000002708 Trim14Q8BVW3 440 aa16.7■□□□□ 0.26
Shh-201ENSMUST00000002708 Pth2rQ91V95 546 aa16.7■□□□□ 0.26
Shh-201ENSMUST00000002708 GneQ91WG8 722 aaKnown RBP16.7■□□□□ 0.26
Shh-201ENSMUST00000002708 Rrp15Q9CYX7 281 aaKnown RBP16.7■□□□□ 0.26
Shh-201ENSMUST00000002708 Lsm12Q9D0R8 195 aa16.7■□□□□ 0.26
Shh-201ENSMUST00000002708 Slamf8Q9D3G2 278 aa16.7■□□□□ 0.26
Shh-201ENSMUST00000002708 Katnal2Q9D3R6 539 aa16.7■□□□□ 0.26
Shh-201ENSMUST00000002708 Dnaja2Q9QYJ0 412 aa16.7■□□□□ 0.26
Shh-201ENSMUST00000002708 Wnt8bQ9WUD6 350 aa16.7■□□□□ 0.26
Shh-201ENSMUST00000002708 Grin3aA2AIR5 1135 aa16.69■□□□□ 0.26
Shh-201ENSMUST00000002708 Dennd5bA2RSQ0 1274 aa16.69■□□□□ 0.26
Shh-201ENSMUST00000002708 Slc16a6B1AT66 607 aa16.69■□□□□ 0.26
Shh-201ENSMUST00000002708 UprtB1AVZ0 310 aa16.69■□□□□ 0.26
Shh-201ENSMUST00000002708 Ercc2O08811 760 aaKnown RBP16.69■□□□□ 0.26
Shh-201ENSMUST00000002708 Dmp1O55188 503 aa16.69■□□□□ 0.26
Shh-201ENSMUST00000002708 Prl3b1P09586 222 aa16.69■□□□□ 0.26
Shh-201ENSMUST00000002708 Traf6P70196 530 aa16.69■□□□□ 0.26
Shh-201ENSMUST00000002708 Ak8Q32M07 479 aa16.69■□□□□ 0.26
Shh-201ENSMUST00000002708 E330034G19RikQ3UWX6 351 aa16.69■□□□□ 0.26
Shh-201ENSMUST00000002708 Suds3Q8BR65 328 aa16.69■□□□□ 0.26
Shh-201ENSMUST00000002708 Prr33Q8C494 260 aa16.69■□□□□ 0.26
Shh-201ENSMUST00000002708 Prkag2Q91WG5 566 aa16.69■□□□□ 0.26
Shh-201ENSMUST00000002708 Gtf2ird2Q99NI3 936 aa16.69■□□□□ 0.26
Shh-201ENSMUST00000002708 Q9D4A5 307 aa16.69■□□□□ 0.26
Shh-201ENSMUST00000002708 Fip1l1Q9D824 581 aaKnown RBP16.69■□□□□ 0.26
Shh-201ENSMUST00000002708 Maged2Q9ER67 616 aa16.69■□□□□ 0.26
Shh-201ENSMUST00000002708 Mmp19Q9JHI0 527 aa16.69■□□□□ 0.26
Shh-201ENSMUST00000002708 Plxna1P70206 1894 aa16.69■□□□□ 0.26
Shh-201ENSMUST00000002708 Pramef17A2ASJ1 475 aa16.69■□□□□ 0.26
Shh-201ENSMUST00000002708 Dpy19l2P0CW70 773 aa16.69■□□□□ 0.26
Shh-201ENSMUST00000002708 Pcsk1P63239 753 aa16.69■□□□□ 0.26
Shh-201ENSMUST00000002708 Q3U4G0 281 aa16.69■□□□□ 0.26
Shh-201ENSMUST00000002708 Sh2d1b2Q45HK4 132 aa16.69■□□□□ 0.26
Shh-201ENSMUST00000002708 Klhl14Q69ZK5 630 aa16.69■□□□□ 0.26
Shh-201ENSMUST00000002708 NeproQ8R2U2 564 aa16.69■□□□□ 0.26
Shh-201ENSMUST00000002708 Catsper1Q91ZR5 686 aa16.69■□□□□ 0.26
Shh-201ENSMUST00000002708 Fam81bA0A140LI28 432 aa16.69■□□□□ 0.26
Shh-201ENSMUST00000002708 Dhx35A2ACQ1 703 aaKnown RBP16.69■□□□□ 0.26
Shh-201ENSMUST00000002708 Inpp5aE9QAS7 422 aa16.69■□□□□ 0.26
Shh-201ENSMUST00000002708 Vmn2r1O70410 912 aa16.69■□□□□ 0.26
Shh-201ENSMUST00000002708 Hcn3O88705 779 aa16.69■□□□□ 0.26
Shh-201ENSMUST00000002708 Tsta3P23591 321 aa16.69■□□□□ 0.26
Shh-201ENSMUST00000002708 Gdf3Q07104 366 aa16.69■□□□□ 0.26
Shh-201ENSMUST00000002708 Nlrp9cQ66X01 1004 aa16.69■□□□□ 0.26
Shh-201ENSMUST00000002708 Rps27lQ6ZWY3 84 aaKnown RBP16.69■□□□□ 0.26
Shh-201ENSMUST00000002708 4930503B20RikQ80ZP0 234 aa16.69■□□□□ 0.26
Shh-201ENSMUST00000002708 Adam32Q8K410 754 aa16.69■□□□□ 0.26
Shh-201ENSMUST00000002708 Ppp6r2Q8R3Q2 923 aa16.69■□□□□ 0.26
Shh-201ENSMUST00000002708 Pcdh18Q8VHR0 1134 aa16.69■□□□□ 0.26
Shh-201ENSMUST00000002708 Kdm8Q9CXT6 414 aa16.69■□□□□ 0.26
Shh-201ENSMUST00000002708 Fam90a1bQ9D4F3 419 aa16.69■□□□□ 0.26
Retrieved 100 of 22,080 RNA–protein pairs in 44.8 ms