RNA–Protein interactions for RNA: ENST00000641947.1

PHGDH-232, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,774 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-232ENST00000641947 KCTD11Q693B1 232 aa17.96■□□□□ 0.47
PHGDH-232ENST00000641947 RIN3Q8TB24 985 aa17.96■□□□□ 0.47
PHGDH-232ENST00000641947 ZNF707Q96C28 371 aaPredicted RBP17.96■□□□□ 0.47
PHGDH-232ENST00000641947 OXNAD1Q96HP4 312 aaPredicted RBP17.96■□□□□ 0.47
PHGDH-232ENST00000641947 VAT1Q99536 393 aa17.96■□□□□ 0.47
PHGDH-232ENST00000641947 TRIM56Q9BRZ2 755 aaKnown RBP17.96■□□□□ 0.47
PHGDH-232ENST00000641947 TMEM109Q9BVC6 243 aa17.96■□□□□ 0.47
PHGDH-232ENST00000641947 VPS18Q9P253 973 aa17.96■□□□□ 0.47
PHGDH-232ENST00000641947 TRHDEQ9UKU6 1024 aa17.96■□□□□ 0.47
PHGDH-232ENST00000641947 ARHGAP42A6NI28 874 aa17.96■□□□□ 0.47
PHGDH-232ENST00000641947 SMIM23A6NLE4 172 aa17.96■□□□□ 0.47
PHGDH-232ENST00000641947 GOLGA8KD6RF30 607 aa17.96■□□□□ 0.47
PHGDH-232ENST00000641947 CACNG3O60359 315 aa17.96■□□□□ 0.47
PHGDH-232ENST00000641947 ZNF189O75820 626 aaPredicted RBP17.96■□□□□ 0.47
PHGDH-232ENST00000641947 RHOP08100 348 aa17.96■□□□□ 0.47
PHGDH-232ENST00000641947 HOXA9P31269 272 aa17.96■□□□□ 0.47
PHGDH-232ENST00000641947 SLCO1A2P46721 670 aa17.96■□□□□ 0.47
PHGDH-232ENST00000641947 SERINC3Q13530 473 aa17.96■□□□□ 0.47
PHGDH-232ENST00000641947 POLD3Q15054 466 aaPredicted RBP17.96■□□□□ 0.47
PHGDH-232ENST00000641947 TEAD2Q15562 447 aa17.96■□□□□ 0.47
PHGDH-232ENST00000641947 RABGAP1LQ5R372 815 aa17.96■□□□□ 0.47
PHGDH-232ENST00000641947 PPP1R21Q6ZMI0 780 aa17.96■□□□□ 0.47
PHGDH-232ENST00000641947 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.96■□□□□ 0.47
PHGDH-232ENST00000641947 TTC16Q8NEE8 873 aa17.96■□□□□ 0.47
PHGDH-232ENST00000641947 PYROXD1Q8WU10 500 aa17.96■□□□□ 0.47
PHGDH-232ENST00000641947 ARNTL2Q8WYA1 636 aa17.96■□□□□ 0.47
PHGDH-232ENST00000641947 TTC25Q96NG3 672 aa17.96■□□□□ 0.47
PHGDH-232ENST00000641947 CENPHQ9H3R5 247 aa17.96■□□□□ 0.47
PHGDH-232ENST00000641947 CCL26Q9Y258 94 aa17.96■□□□□ 0.47
PHGDH-232ENST00000641947 XIRP2A4UGR9 3374 aa17.96■□□□□ 0.47
PHGDH-232ENST00000641947 TRAV19A0A0A6YYK7 116 aa17.95■□□□□ 0.46
PHGDH-232ENST00000641947 RRP9O43818 475 aaKnown RBP17.95■□□□□ 0.46
PHGDH-232ENST00000641947 C1RP00736 705 aa17.95■□□□□ 0.46
PHGDH-232ENST00000641947 MYZAPP0CAP1 466 aa17.95■□□□□ 0.46
PHGDH-232ENST00000641947 GCAP28676 217 aa17.95■□□□□ 0.46
PHGDH-232ENST00000641947 CDH4P55283 916 aa17.95■□□□□ 0.46
PHGDH-232ENST00000641947 TIGD7Q6NT04 549 aaPredicted RBP17.95■□□□□ 0.46
PHGDH-232ENST00000641947 LEKR1Q6ZMV7 388 aa17.95■□□□□ 0.46
PHGDH-232ENST00000641947 FAM217AQ8IXS0 508 aa17.95■□□□□ 0.46
PHGDH-232ENST00000641947 KLHDC8BQ8IXV7 354 aa17.95■□□□□ 0.46
PHGDH-232ENST00000641947 GOLGA6L1Q8N7Z2 621 aa17.95■□□□□ 0.46
PHGDH-232ENST00000641947 ARHGEF2Q92974 986 aaKnown RBP17.95■□□□□ 0.46
PHGDH-232ENST00000641947 ATP6V1G3Q96LB4 118 aa17.95■□□□□ 0.46
PHGDH-232ENST00000641947 SIGLEC10Q96LC7 697 aa17.95■□□□□ 0.46
PHGDH-232ENST00000641947 GCNAQ96QF7 691 aa17.95■□□□□ 0.46
PHGDH-232ENST00000641947 UBP1Q9NZI7 540 aa17.95■□□□□ 0.46
PHGDH-232ENST00000641947 CFAP97Q9P2B7 532 aa17.95■□□□□ 0.46
PHGDH-232ENST00000641947 USP12O75317 370 aa17.94■□□□□ 0.46
PHGDH-232ENST00000641947 AP2A1O95782 977 aa17.94■□□□□ 0.46
PHGDH-232ENST00000641947 LATS1O95835 1130 aa17.94■□□□□ 0.46
PHGDH-232ENST00000641947 PTPN2P17706 415 aa17.94■□□□□ 0.46
PHGDH-232ENST00000641947 HOXD9P28356 352 aaPredicted RBP17.94■□□□□ 0.46
PHGDH-232ENST00000641947 LMAN1P49257 510 aa17.94■□□□□ 0.46
PHGDH-232ENST00000641947 SLC10A7Q0GE19 358 aa17.94■□□□□ 0.46
PHGDH-232ENST00000641947 PARP15Q460N3 678 aa17.94■□□□□ 0.46
PHGDH-232ENST00000641947 CCDC38Q502W7 563 aa17.94■□□□□ 0.46
PHGDH-232ENST00000641947 PRSS36Q5K4E3 855 aa17.94■□□□□ 0.46
PHGDH-232ENST00000641947 GPR158Q5T848 1215 aa17.94■□□□□ 0.46
PHGDH-232ENST00000641947 PDE12Q6L8Q7 609 aaKnown RBP17.94■□□□□ 0.46
PHGDH-232ENST00000641947 CXorf57Q6NSI4 855 aaKnown RBP17.94■□□□□ 0.46
PHGDH-232ENST00000641947 RTL10Q7L3V2 364 aa17.94■□□□□ 0.46
PHGDH-232ENST00000641947 LRRC49Q8IUZ0 686 aa17.94■□□□□ 0.46
PHGDH-232ENST00000641947 VN1R2Q8NFZ6 395 aa17.94■□□□□ 0.46
PHGDH-232ENST00000641947 OR7D4Q8NG98 312 aa17.94■□□□□ 0.46
PHGDH-232ENST00000641947 SPATA22Q8NHS9 363 aa17.94■□□□□ 0.46
PHGDH-232ENST00000641947 FRMD8Q9BZ67 464 aaPredicted RBP17.94■□□□□ 0.46
PHGDH-232ENST00000641947 VPS37BQ9H9H4 285 aa17.94■□□□□ 0.46
PHGDH-232ENST00000641947 PDFQ9HBH1 243 aa17.94■□□□□ 0.46
PHGDH-232ENST00000641947 GLOD4Q9HC38 313 aa17.94■□□□□ 0.46
PHGDH-232ENST00000641947 RBM22Q9NW64 420 aaKnown RBP eCLIP17.94■□□□□ 0.46
PHGDH-232ENST00000641947 CTNNAL1Q9UBT7 734 aa17.94■□□□□ 0.46
PHGDH-232ENST00000641947 ACTL7AQ9Y615 435 aa17.94■□□□□ 0.46
PHGDH-232ENST00000641947 ANKRD36A6QL64 1941 aa17.94■□□□□ 0.46
PHGDH-232ENST00000641947 SPTBN5Q9NRC6 3674 aaKnown RBP17.94■□□□□ 0.46
PHGDH-232ENST00000641947 TLDC2A0PJX2 215 aa17.94■□□□□ 0.46
PHGDH-232ENST00000641947 LEFTY2O00292 366 aa17.94■□□□□ 0.46
PHGDH-232ENST00000641947 PIAS1O75925 651 aa17.94■□□□□ 0.46
PHGDH-232ENST00000641947 SUN1O94901 812 aa17.94■□□□□ 0.46
PHGDH-232ENST00000641947 HNRNPA1P09651 372 aaKnown RBP eCLIP17.94■□□□□ 0.46
PHGDH-232ENST00000641947 CDK16Q00536 496 aa17.94■□□□□ 0.46
PHGDH-232ENST00000641947 EFTUD2Q15029 972 aaKnown RBP eCLIP17.94■□□□□ 0.463e-6■■■■□ 23.9
PHGDH-232ENST00000641947 PPP2R2DQ66LE6 453 aa17.94■□□□□ 0.46
PHGDH-232ENST00000641947 ITPRIPL1Q6GPH6 555 aa17.94■□□□□ 0.46
PHGDH-232ENST00000641947 LRRC8BQ6P9F7 803 aa17.94■□□□□ 0.46
PHGDH-232ENST00000641947 CHST9Q7L1S5 443 aa17.94■□□□□ 0.46
PHGDH-232ENST00000641947 GRASPQ7Z6J2 395 aaPredicted RBP17.94■□□□□ 0.46
PHGDH-232ENST00000641947 BBS7Q8IWZ6 715 aa17.94■□□□□ 0.46
PHGDH-232ENST00000641947 FATE1Q969F0 183 aa17.94■□□□□ 0.46
PHGDH-232ENST00000641947 XAB2Q9HCS7 855 aaKnown RBP17.94■□□□□ 0.46
PHGDH-232ENST00000641947 DONSONQ9NYP3 566 aa17.94■□□□□ 0.46
PHGDH-232ENST00000641947 TTLL3Q9Y4R7 772 aa17.94■□□□□ 0.46
PHGDH-232ENST00000641947 A0A087WUV0 522 aaPredicted RBP17.93■□□□□ 0.46
PHGDH-232ENST00000641947 A0A1B0GVM2 712 aa17.93■□□□□ 0.46
PHGDH-232ENST00000641947 TCAF2A6NFQ2 919 aa17.93■□□□□ 0.46
PHGDH-232ENST00000641947 CLDN11O75508 207 aa17.93■□□□□ 0.46
PHGDH-232ENST00000641947 MT-CYBP00156 380 aaPredicted RBP17.93■□□□□ 0.46
PHGDH-232ENST00000641947 GLDCP23378 1020 aa17.93■□□□□ 0.46
PHGDH-232ENST00000641947 YBEYP58557 167 aaPredicted RBP17.93■□□□□ 0.46
PHGDH-232ENST00000641947 CRADDP78560 199 aa17.93■□□□□ 0.46
PHGDH-232ENST00000641947 GNA12Q03113 381 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms