RNA–Protein interactions for RNA: ENST00000640640.1

SCARB2-223, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5 BASIC

Gene SCARB2, Length 4,608 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-223ENST00000640640 HECTD3Q5T447 861 aa17.85■□□□□ 0.45
SCARB2-223ENST00000640640 FAM9CQ8IZT9 166 aa17.85■□□□□ 0.45
SCARB2-223ENST00000640640 PGBD3Q8N328 593 aa17.85■□□□□ 0.45
SCARB2-223ENST00000640640 POMKQ9H5K3 350 aa17.85■□□□□ 0.45
SCARB2-223ENST00000640640 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.85■□□□□ 0.454e-8■■■■■ 28.1
SCARB2-223ENST00000640640 ADAM28Q9UKQ2 775 aa17.85■□□□□ 0.45
SCARB2-223ENST00000640640 CD48P09326 243 aa17.85■□□□□ 0.45
SCARB2-223ENST00000640640 ZCCHC18P0CG32 403 aa17.85■□□□□ 0.45
SCARB2-223ENST00000640640 HOXD13P35453 343 aa17.85■□□□□ 0.45
SCARB2-223ENST00000640640 AIF1P55008 147 aa17.85■□□□□ 0.45
SCARB2-223ENST00000640640 CHRNB3Q05901 458 aa17.85■□□□□ 0.45
SCARB2-223ENST00000640640 TCHHL1Q5QJ38 904 aaPredicted RBP17.85■□□□□ 0.45
SCARB2-223ENST00000640640 SEMA3CQ99985 751 aa17.85■□□□□ 0.45
SCARB2-223ENST00000640640 TMEM161AQ9NX61 479 aa17.85■□□□□ 0.45
SCARB2-223ENST00000640640 SFMBT1Q9UHJ3 866 aa17.85■□□□□ 0.45
SCARB2-223ENST00000640640 PLA2G4CQ9UP65 541 aa17.85■□□□□ 0.45
SCARB2-223ENST00000640640 OTUB1Q96FW1 271 aaPredicted RBP17.84■□□□□ 0.45
SCARB2-223ENST00000640640 CNBD2Q96M20 576 aa17.84■□□□□ 0.45
SCARB2-223ENST00000640640 SPATA16Q9BXB7 569 aa17.84■□□□□ 0.45
SCARB2-223ENST00000640640 CCDC167Q9P0B6 97 aa17.84■□□□□ 0.45
SCARB2-223ENST00000640640 ELF3P78545 371 aaPredicted RBP17.84■□□□□ 0.45
SCARB2-223ENST00000640640 SP2Q02086 613 aa17.84■□□□□ 0.45
SCARB2-223ENST00000640640 FASTKQ14296 549 aaKnown RBP17.84■□□□□ 0.45
SCARB2-223ENST00000640640 SKIV2LQ15477 1246 aaKnown RBP17.84■□□□□ 0.45
SCARB2-223ENST00000640640 ARCQ7LC44 396 aa17.84■□□□□ 0.45
SCARB2-223ENST00000640640 MON1AQ86VX9 555 aa17.84■□□□□ 0.45
SCARB2-223ENST00000640640 NDRG1Q92597 394 aaKnown RBP17.84■□□□□ 0.45
SCARB2-223ENST00000640640 DACH2Q96NX9 599 aa17.84■□□□□ 0.45
SCARB2-223ENST00000640640 RCOR3Q9P2K3 495 aaPredicted RBP17.84■□□□□ 0.45
SCARB2-223ENST00000640640 POLG2Q9UHN1 485 aa17.84■□□□□ 0.45
SCARB2-223ENST00000640640 SLC27A5Q9Y2P5 690 aa17.84■□□□□ 0.45
SCARB2-223ENST00000640640 ENO4A6NNW6 628 aa17.84■□□□□ 0.45
SCARB2-223ENST00000640640 BTN3A1O00481 513 aa17.84■□□□□ 0.45
SCARB2-223ENST00000640640 PAPSS1O43252 624 aaPredicted RBP17.84■□□□□ 0.45
SCARB2-223ENST00000640640 ZNF23P17027 643 aa17.84■□□□□ 0.45
SCARB2-223ENST00000640640 KLRC2P26717 231 aa17.84■□□□□ 0.45
SCARB2-223ENST00000640640 PTGIRP43119 386 aa17.84■□□□□ 0.45
SCARB2-223ENST00000640640 CCNG1P51959 295 aa17.84■□□□□ 0.45
SCARB2-223ENST00000640640 BCL2L1Q07817 233 aa17.84■□□□□ 0.45
SCARB2-223ENST00000640640 BRMS1LQ5PSV4 323 aa17.84■□□□□ 0.45
SCARB2-223ENST00000640640 ACE2Q9BYF1 805 aaPredicted RBP17.84■□□□□ 0.45
SCARB2-223ENST00000640640 NMRK1Q9NWW6 199 aa17.84■□□□□ 0.45
SCARB2-223ENST00000640640 SYBUQ9NX95 663 aa17.84■□□□□ 0.45
SCARB2-223ENST00000640640 PDP2Q9P2J9 529 aa17.84■□□□□ 0.45
SCARB2-223ENST00000640640 PRR23AA6NEV1 266 aa17.84■□□□□ 0.45
SCARB2-223ENST00000640640 PIGRP01833 764 aa17.84■□□□□ 0.45
SCARB2-223ENST00000640640 CCDC166P0CW27 439 aa17.84■□□□□ 0.45
SCARB2-223ENST00000640640 ZBTB48P10074 688 aaPredicted RBP17.84■□□□□ 0.45
SCARB2-223ENST00000640640 FMO4P31512 558 aa17.84■□□□□ 0.45
SCARB2-223ENST00000640640 ATP6V1E1P36543 226 aa17.84■□□□□ 0.45
SCARB2-223ENST00000640640 SLC34A1Q06495 639 aa17.84■□□□□ 0.45
SCARB2-223ENST00000640640 MSLNQ13421 630 aaPredicted RBP17.84■□□□□ 0.45
SCARB2-223ENST00000640640 IKBKEQ14164 716 aa17.84■□□□□ 0.45
SCARB2-223ENST00000640640 PABPC1LQ4VXU2 614 aaKnown RBP17.84■□□□□ 0.45
SCARB2-223ENST00000640640 ARMC12Q5T9G4 340 aa17.84■□□□□ 0.45
SCARB2-223ENST00000640640 SPRYD7Q5W111 196 aa17.84■□□□□ 0.45
SCARB2-223ENST00000640640 METTL6Q8TCB7 284 aa17.84■□□□□ 0.45
SCARB2-223ENST00000640640 PHACTR1Q9C0D0 580 aa17.84■□□□□ 0.45
SCARB2-223ENST00000640640 FAM124BQ9H5Z6 455 aaPredicted RBP17.84■□□□□ 0.45
SCARB2-223ENST00000640640 FBXO6Q9NRD1 293 aaPredicted RBP17.84■□□□□ 0.45
SCARB2-223ENST00000640640 CCNT2O60583 730 aaKnown RBP17.83■□□□□ 0.45
SCARB2-223ENST00000640640 EDF1O60869 148 aaKnown RBP17.83■□□□□ 0.45
SCARB2-223ENST00000640640 PDE5AO76074 875 aa17.83■□□□□ 0.45
SCARB2-223ENST00000640640 LILRA4P59901 499 aa17.83■□□□□ 0.45
SCARB2-223ENST00000640640 MAXP61244 160 aa17.83■□□□□ 0.45
SCARB2-223ENST00000640640 SH3D19Q5HYK7 790 aa17.83■□□□□ 0.45
SCARB2-223ENST00000640640 CPNE8Q86YQ8 564 aa17.83■□□□□ 0.45
SCARB2-223ENST00000640640 DNMT3LQ9UJW3 386 aa17.83■□□□□ 0.45
SCARB2-223ENST00000640640 FBXO5Q9UKT4 447 aa17.83■□□□□ 0.45
SCARB2-223ENST00000640640 ADCY6O43306 1168 aa17.83■□□□□ 0.44
SCARB2-223ENST00000640640 HALP42357 657 aa17.83■□□□□ 0.44
SCARB2-223ENST00000640640 FASTKD3Q14CZ7 662 aaKnown RBP17.83■□□□□ 0.44
SCARB2-223ENST00000640640 SDE2Q6IQ49 451 aa17.83■□□□□ 0.44
SCARB2-223ENST00000640640 TTC33Q6PID6 262 aaPredicted RBP17.83■□□□□ 0.44
SCARB2-223ENST00000640640 SENP6Q9GZR1 1112 aaPredicted RBP17.83■□□□□ 0.44
SCARB2-223ENST00000640640 ZNF556Q9HAH1 456 aa17.83■□□□□ 0.44
SCARB2-223ENST00000640640 CATSPERZQ9NTU4 200 aa17.83■□□□□ 0.44
SCARB2-223ENST00000640640 APPL1Q9UKG1 709 aa17.83■□□□□ 0.44
SCARB2-223ENST00000640640 CROTQ9UKG9 612 aa17.83■□□□□ 0.44
SCARB2-223ENST00000640640 PNMA8BQ9ULN7 279 aaPredicted RBP17.83■□□□□ 0.44
SCARB2-223ENST00000640640 PADI3Q9ULW8 664 aa17.83■□□□□ 0.44
SCARB2-223ENST00000640640 SORCS3Q9UPU3 1222 aa17.83■□□□□ 0.44
SCARB2-223ENST00000640640 STXBP5LQ9Y2K9 1186 aa17.83■□□□□ 0.44
SCARB2-223ENST00000640640 A0A087X1B8 175 aa17.83■□□□□ 0.44
SCARB2-223ENST00000640640 SCAMP3O14828 347 aaKnown RBP17.83■□□□□ 0.44
SCARB2-223ENST00000640640 MDM4O15151 490 aa17.83■□□□□ 0.44
SCARB2-223ENST00000640640 RAD51BO15315 384 aa17.83■□□□□ 0.44
SCARB2-223ENST00000640640 KRT6AP02538 564 aa17.83■□□□□ 0.44
SCARB2-223ENST00000640640 KRT6BP04259 564 aa17.83■□□□□ 0.44
SCARB2-223ENST00000640640 CKBP12277 381 aa17.83■□□□□ 0.44
SCARB2-223ENST00000640640 SOAT1P35610 550 aa17.83■□□□□ 0.44
SCARB2-223ENST00000640640 KRT6CP48668 564 aa17.83■□□□□ 0.44
SCARB2-223ENST00000640640 NOGQ13253 232 aa17.83■□□□□ 0.44
SCARB2-223ENST00000640640 DMC1Q14565 340 aa17.83■□□□□ 0.44
SCARB2-223ENST00000640640 PACS1Q6VY07 963 aa17.83■□□□□ 0.44
SCARB2-223ENST00000640640 ZNF572Q7Z3I7 529 aaPredicted RBP17.83■□□□□ 0.44
SCARB2-223ENST00000640640 HORMAD1Q86X24 394 aa17.83■□□□□ 0.44
SCARB2-223ENST00000640640 C2orf49Q9BVC5 232 aaPredicted RBP17.83■□□□□ 0.44
SCARB2-223ENST00000640640 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.83■□□□□ 0.44
SCARB2-223ENST00000640640 MMADHCQ9H3L0 296 aaPredicted RBP17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms