RNA–Protein interactions for RNA: ENST00000640289.1

GTF3A-209, Transcript of general transcription factor IIIA, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-209ENST00000640289 KCNV2Q8TDN2 545 aa13.51□□□□□ -0.25
GTF3A-209ENST00000640289 ACDQ96AP0 544 aa13.51□□□□□ -0.25
GTF3A-209ENST00000640289 RNF157Q96PX1 679 aa13.51□□□□□ -0.25
GTF3A-209ENST00000640289 GABRG3Q99928 467 aa13.51□□□□□ -0.25
GTF3A-209ENST00000640289 C2orf49Q9BVC5 232 aaPredicted RBP13.51□□□□□ -0.25
GTF3A-209ENST00000640289 ACE2Q9BYF1 805 aaPredicted RBP13.51□□□□□ -0.25
GTF3A-209ENST00000640289 MTG2Q9H4K7 406 aa13.51□□□□□ -0.25
GTF3A-209ENST00000640289 PLA2G4CQ9UP65 541 aa13.51□□□□□ -0.25
GTF3A-209ENST00000640289 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.51□□□□□ -0.25
GTF3A-209ENST00000640289 TTC34A8MYJ7 566 aa13.5□□□□□ -0.25
GTF3A-209ENST00000640289 K7ERQ8 282 aa13.5□□□□□ -0.25
GTF3A-209ENST00000640289 DFFAO00273 331 aa13.5□□□□□ -0.25
GTF3A-209ENST00000640289 MFSD11O43934 449 aa13.5□□□□□ -0.25
GTF3A-209ENST00000640289 ZRANB2O95218 330 aaKnown RBP eCLIP13.5□□□□□ -0.25
GTF3A-209ENST00000640289 MAP3K6O95382 1288 aa13.5□□□□□ -0.25
GTF3A-209ENST00000640289 CD160O95971 181 aa13.5□□□□□ -0.25
GTF3A-209ENST00000640289 EPHX1P07099 455 aa13.5□□□□□ -0.25
GTF3A-209ENST00000640289 SRPRAP08240 638 aaKnown RBP13.5□□□□□ -0.25
GTF3A-209ENST00000640289 KRT10P13645 584 aa13.5□□□□□ -0.25
GTF3A-209ENST00000640289 HOXB2P14652 356 aa13.5□□□□□ -0.25
GTF3A-209ENST00000640289 CDKN2BP42772 138 aa13.5□□□□□ -0.25
GTF3A-209ENST00000640289 PAPOLAP51003 745 aaKnown RBP13.5□□□□□ -0.25
GTF3A-209ENST00000640289 NDST2P52849 883 aa13.5□□□□□ -0.25
GTF3A-209ENST00000640289 RWDD2BP57060 319 aa13.5□□□□□ -0.25
GTF3A-209ENST00000640289 YBEYP58557 167 aaPredicted RBP13.5□□□□□ -0.25
GTF3A-209ENST00000640289 ARF5P84085 180 aa13.5□□□□□ -0.25
GTF3A-209ENST00000640289 SERINC3Q13530 473 aa13.5□□□□□ -0.25
GTF3A-209ENST00000640289 ENPP2Q13822 863 aa13.5□□□□□ -0.25
GTF3A-209ENST00000640289 PARP15Q460N3 678 aa13.5□□□□□ -0.25
GTF3A-209ENST00000640289 HSF5Q4G112 596 aaPredicted RBP13.5□□□□□ -0.25
GTF3A-209ENST00000640289 EOGTQ5NDL2 527 aa13.5□□□□□ -0.25
GTF3A-209ENST00000640289 KIAA1211LQ6NV74 962 aa13.5□□□□□ -0.25
GTF3A-209ENST00000640289 AADACL2Q6P093 401 aa13.5□□□□□ -0.25
GTF3A-209ENST00000640289 TSSK4Q6SA08 328 aa13.5□□□□□ -0.25
GTF3A-209ENST00000640289 SERPINA13PQ6UXR4 307 aa13.5□□□□□ -0.25
GTF3A-209ENST00000640289 SPOCD1Q6ZMY3 1216 aa13.5□□□□□ -0.25
GTF3A-209ENST00000640289 SYT13Q7L8C5 426 aa13.5□□□□□ -0.25
GTF3A-209ENST00000640289 RFX6Q8HWS3 928 aa13.5□□□□□ -0.25
GTF3A-209ENST00000640289 CCDC50Q8IVM0 306 aa13.5□□□□□ -0.25
GTF3A-209ENST00000640289 C1orf210Q8IVY1 113 aa13.5□□□□□ -0.25
GTF3A-209ENST00000640289 RCOR2Q8IZ40 523 aa13.5□□□□□ -0.25
GTF3A-209ENST00000640289 MAML2Q8IZL2 1156 aaPredicted RBP13.5□□□□□ -0.25
GTF3A-209ENST00000640289 EXD1Q8NHP7 514 aa13.5□□□□□ -0.25
GTF3A-209ENST00000640289 HES6Q96HZ4 224 aa13.5□□□□□ -0.25
GTF3A-209ENST00000640289 ALS2CR12Q96Q35 445 aa13.5□□□□□ -0.25
GTF3A-209ENST00000640289 IER2Q9BTL4 223 aa13.5□□□□□ -0.25
GTF3A-209ENST00000640289 TMEM245Q9H330 911 aa13.5□□□□□ -0.25
GTF3A-209ENST00000640289 SLC25A13Q9UJS0 675 aa13.5□□□□□ -0.25
GTF3A-209ENST00000640289 hCG_1818297A0A087WSY0 165 aa13.49□□□□□ -0.25
GTF3A-209ENST00000640289 A0A1W2PQF6 199 aa13.49□□□□□ -0.25
GTF3A-209ENST00000640289 MIF4GDA9UHW6 222 aaKnown RBP13.49□□□□□ -0.25
GTF3A-209ENST00000640289 NPC1O15118 1278 aa13.49□□□□□ -0.25
GTF3A-209ENST00000640289 LAMTOR5O43504 91 aa13.49□□□□□ -0.25
GTF3A-209ENST00000640289 KDELR3O43731 214 aa13.49□□□□□ -0.25
GTF3A-209ENST00000640289 PYGMP11217 842 aa13.49□□□□□ -0.25
GTF3A-209ENST00000640289 SRCP12931 536 aa13.49□□□□□ -0.25
GTF3A-209ENST00000640289 SERPINB6P35237 376 aa13.49□□□□□ -0.25
GTF3A-209ENST00000640289 ETFBP38117 255 aa13.49□□□□□ -0.25
GTF3A-209ENST00000640289 CXCL12P48061 93 aa13.49□□□□□ -0.25
GTF3A-209ENST00000640289 CCR3P51677 355 aa13.49□□□□□ -0.25
GTF3A-209ENST00000640289 ST8SIA6P61647 398 aa13.49□□□□□ -0.25
GTF3A-209ENST00000640289 DYNLT1P63172 113 aa13.49□□□□□ -0.25
GTF3A-209ENST00000640289 ADCY2Q08462 1091 aa13.49□□□□□ -0.25
GTF3A-209ENST00000640289 ZNF211Q13398 564 aaPredicted RBP13.49□□□□□ -0.25
GTF3A-209ENST00000640289 PAFAH1B3Q15102 231 aaKnown RBP13.49□□□□□ -0.25
GTF3A-209ENST00000640289 CRY1Q16526 586 aa13.49□□□□□ -0.25
GTF3A-209ENST00000640289 MEI1Q5TIA1 1274 aa13.49□□□□□ -0.25
GTF3A-209ENST00000640289 KAZNQ674X7 775 aa13.49□□□□□ -0.25
GTF3A-209ENST00000640289 SLC9A4Q6AI14 798 aa13.49□□□□□ -0.25
GTF3A-209ENST00000640289 SDE2Q6IQ49 451 aa13.49□□□□□ -0.25
GTF3A-209ENST00000640289 VSIG1Q86XK7 387 aa13.49□□□□□ -0.25
GTF3A-209ENST00000640289 LZTR1Q8N653 840 aa13.49□□□□□ -0.25
GTF3A-209ENST00000640289 PLD5Q8N7P1 536 aa13.49□□□□□ -0.25
GTF3A-209ENST00000640289 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.49□□□□□ -0.25
GTF3A-209ENST00000640289 RBM41Q96IZ5 413 aaKnown RBP13.49□□□□□ -0.25
GTF3A-209ENST00000640289 HHIPQ96QV1 700 aa13.49□□□□□ -0.25
GTF3A-209ENST00000640289 HERPUD2Q9BSE4 406 aa13.49□□□□□ -0.25
GTF3A-209ENST00000640289 MAK16Q9BXY0 300 aaKnown RBP13.49□□□□□ -0.25
GTF3A-209ENST00000640289 CD248Q9HCU0 757 aa13.49□□□□□ -0.25
GTF3A-209ENST00000640289 DONSONQ9NYP3 566 aa13.49□□□□□ -0.25
GTF3A-209ENST00000640289 SLC8A2Q9UPR5 921 aa13.49□□□□□ -0.25
GTF3A-209ENST00000640289 TRIOO75962 3097 aa13.49□□□□□ -0.25
GTF3A-209ENST00000640289 MUC22E2RYF6 1773 aaPredicted RBP13.48□□□□□ -0.25
GTF3A-209ENST00000640289 ARHGAP42A6NI28 874 aa13.48□□□□□ -0.25
GTF3A-209ENST00000640289 ZNF487B1APH4 448 aa13.48□□□□□ -0.25
GTF3A-209ENST00000640289 J3KR12 359 aa13.48□□□□□ -0.25
GTF3A-209ENST00000640289 K7ESF4 209 aa13.48□□□□□ -0.25
GTF3A-209ENST00000640289 APOL1O14791 398 aa13.48□□□□□ -0.25
GTF3A-209ENST00000640289 SMAD6O43541 496 aaKnown RBP13.48□□□□□ -0.25
GTF3A-209ENST00000640289 VAV1P15498 845 aa13.48□□□□□ -0.25
GTF3A-209ENST00000640289 PXNP49023 591 aaPredicted RBP13.48□□□□□ -0.25
GTF3A-209ENST00000640289 GBE1Q04446 702 aa13.48□□□□□ -0.25
GTF3A-209ENST00000640289 SLC10A2Q12908 348 aaPredicted RBP13.48□□□□□ -0.25
GTF3A-209ENST00000640289 TAZQ16635 292 aa13.48□□□□□ -0.25
GTF3A-209ENST00000640289 ACCSLQ4AC99 568 aa13.48□□□□□ -0.25
GTF3A-209ENST00000640289 TFDP3Q5H9I0 405 aa13.48□□□□□ -0.25
GTF3A-209ENST00000640289 DCAF12L1Q5VU92 463 aa13.48□□□□□ -0.25
GTF3A-209ENST00000640289 RETSATQ6NUM9 610 aa13.48□□□□□ -0.25
GTF3A-209ENST00000640289 NPNTQ6UXI9 565 aa13.48□□□□□ -0.25
GTF3A-209ENST00000640289 MAMSTRQ6ZN01 415 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms