RNA–Protein interactions for RNA: ENST00000639856.1

TRIM3-215, Transcript of tripartite motif containing 3, humanhuman

TSL 5 BASIC

Gene TRIM3, Length 2,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-215ENST00000639856 TRHDEQ9UKU6 1024 aa15.41■□□□□ 0.06
TRIM3-215ENST00000639856 H7C4K7 107 aa15.41■□□□□ 0.06
TRIM3-215ENST00000639856 ZBTB24O43167 697 aaPredicted RBP15.41■□□□□ 0.06
TRIM3-215ENST00000639856 ARFIP2P53365 341 aa15.41■□□□□ 0.06
TRIM3-215ENST00000639856 SPANXN3Q5MJ09 141 aa15.41■□□□□ 0.06
TRIM3-215ENST00000639856 ATG16L1Q676U5 607 aa15.41■□□□□ 0.06
TRIM3-215ENST00000639856 CLNKQ7Z7G1 428 aa15.41■□□□□ 0.06
TRIM3-215ENST00000639856 MON1AQ86VX9 555 aa15.41■□□□□ 0.06
TRIM3-215ENST00000639856 FBXO22Q8NEZ5 403 aa15.41■□□□□ 0.06
TRIM3-215ENST00000639856 OR52K1Q8NGK4 314 aa15.41■□□□□ 0.06
TRIM3-215ENST00000639856 INPP5DQ92835 1189 aa15.41■□□□□ 0.06
TRIM3-215ENST00000639856 TOP1MTQ969P6 601 aa15.41■□□□□ 0.06
TRIM3-215ENST00000639856 E2F7Q96AV8 911 aa15.41■□□□□ 0.06
TRIM3-215ENST00000639856 IL37Q9NZH6 218 aa15.41■□□□□ 0.06
TRIM3-215ENST00000639856 SLC17A6Q9P2U8 582 aa15.41■□□□□ 0.06
TRIM3-215ENST00000639856 NEU3Q9UQ49 428 aa15.41■□□□□ 0.06
TRIM3-215ENST00000639856 MTO1Q9Y2Z2 717 aaKnown RBP15.41■□□□□ 0.06
TRIM3-215ENST00000639856 ERI2A8K979 691 aaKnown RBP15.4■□□□□ 0.06
TRIM3-215ENST00000639856 PAGE1O75459 146 aa15.4■□□□□ 0.06
TRIM3-215ENST00000639856 TBX18O95935 607 aa15.4■□□□□ 0.06
TRIM3-215ENST00000639856 MOCS2O96007 188 aaPredicted RBP15.4■□□□□ 0.06
TRIM3-215ENST00000639856 SRGAP2BP0DMP2 458 aa15.4■□□□□ 0.06
TRIM3-215ENST00000639856 ACRP10323 421 aa15.4■□□□□ 0.06
TRIM3-215ENST00000639856 HAPLN1P10915 354 aaPredicted RBP15.4■□□□□ 0.06
TRIM3-215ENST00000639856 HSPA8P11142 646 aaKnown RBP15.4■□□□□ 0.06
TRIM3-215ENST00000639856 RASSF2P50749 326 aa15.4■□□□□ 0.06
TRIM3-215ENST00000639856 TEX44Q53QW1 395 aa15.4■□□□□ 0.06
TRIM3-215ENST00000639856 KCTD11Q693B1 232 aa15.4■□□□□ 0.06
TRIM3-215ENST00000639856 ZNF449Q6P9G9 518 aa15.4■□□□□ 0.06
TRIM3-215ENST00000639856 RAB3IL1Q8TBN0 382 aa15.4■□□□□ 0.06
TRIM3-215ENST00000639856 SPPL2BQ8TCT7 592 aa15.4■□□□□ 0.06
TRIM3-215ENST00000639856 GIPC2Q8TF65 315 aa15.4■□□□□ 0.06
TRIM3-215ENST00000639856 FBXO32Q969P5 355 aa15.4■□□□□ 0.06
TRIM3-215ENST00000639856 C7orf26Q96N11 449 aa15.4■□□□□ 0.06
TRIM3-215ENST00000639856 RAB3IPQ96QF0 476 aaPredicted RBP15.4■□□□□ 0.06
TRIM3-215ENST00000639856 VAT1Q99536 393 aa15.4■□□□□ 0.06
TRIM3-215ENST00000639856 GBA3Q9H227 469 aa15.4■□□□□ 0.06
TRIM3-215ENST00000639856 SAR1AQ9NR31 198 aa15.4■□□□□ 0.06
TRIM3-215ENST00000639856 ZFATQ9P243 1243 aa15.4■□□□□ 0.06
TRIM3-215ENST00000639856 STK38LQ9Y2H1 464 aa15.4■□□□□ 0.06
TRIM3-215ENST00000639856 NUMBLQ9Y6R0 609 aa15.4■□□□□ 0.06
TRIM3-215ENST00000639856 RPS6KL1Q9Y6S9 549 aa15.4■□□□□ 0.06
TRIM3-215ENST00000639856 BIRC5O15392 142 aa15.4■□□□□ 0.06
TRIM3-215ENST00000639856 ALDOAP04075 364 aaKnown RBP15.4■□□□□ 0.06
TRIM3-215ENST00000639856 ATF6P18850 670 aa15.4■□□□□ 0.06
TRIM3-215ENST00000639856 YWHAQP27348 245 aa15.4■□□□□ 0.06
TRIM3-215ENST00000639856 CCR1P32246 355 aa15.4■□□□□ 0.06
TRIM3-215ENST00000639856 SLC8A1P32418 973 aa15.4■□□□□ 0.06
TRIM3-215ENST00000639856 CD68P34810 354 aaPredicted RBP15.4■□□□□ 0.06
TRIM3-215ENST00000639856 TMPRSS15P98073 1019 aa15.4■□□□□ 0.06
TRIM3-215ENST00000639856 BST1Q10588 318 aa15.4■□□□□ 0.06
TRIM3-215ENST00000639856 TAF10Q12962 218 aa15.4■□□□□ 0.06
TRIM3-215ENST00000639856 ZBTB17Q13105 803 aa15.4■□□□□ 0.06
TRIM3-215ENST00000639856 OLIG2Q13516 323 aa15.4■□□□□ 0.06
TRIM3-215ENST00000639856 PSMD5Q16401 504 aa15.4■□□□□ 0.06
TRIM3-215ENST00000639856 CTC1Q2NKJ3 1217 aa15.4■□□□□ 0.06
TRIM3-215ENST00000639856 USP41Q3LFD5 358 aa15.4■□□□□ 0.06
TRIM3-215ENST00000639856 SPOUT1Q5T280 376 aaKnown RBP15.4■□□□□ 0.06
TRIM3-215ENST00000639856 STXBP5Q5T5C0 1151 aa15.4■□□□□ 0.06
TRIM3-215ENST00000639856 SWT1Q5T5J6 900 aaKnown RBP15.4■□□□□ 0.06
TRIM3-215ENST00000639856 ITPRIPL1Q6GPH6 555 aa15.4■□□□□ 0.06
TRIM3-215ENST00000639856 KYAT3Q6YP21 454 aaKnown RBP15.4■□□□□ 0.06
TRIM3-215ENST00000639856 NUDCD3Q8IVD9 361 aa15.4■□□□□ 0.06
TRIM3-215ENST00000639856 RNF168Q8IYW5 571 aaPredicted RBP15.4■□□□□ 0.06
TRIM3-215ENST00000639856 SLC7A6OSQ96CW6 309 aaPredicted RBP15.4■□□□□ 0.06
TRIM3-215ENST00000639856 CERS2Q96G23 380 aa15.4■□□□□ 0.06
TRIM3-215ENST00000639856 TMEM237Q96Q45 408 aa15.4■□□□□ 0.06
TRIM3-215ENST00000639856 TMEM120AQ9BXJ8 343 aa15.4■□□□□ 0.06
TRIM3-215ENST00000639856 OSBPL2Q9H1P3 480 aa15.4■□□□□ 0.06
TRIM3-215ENST00000639856 LRRC40Q9H9A6 602 aa15.4■□□□□ 0.06
TRIM3-215ENST00000639856 CASS4Q9NQ75 786 aa15.4■□□□□ 0.06
TRIM3-215ENST00000639856 MTRRQ9UBK8 725 aa15.4■□□□□ 0.06
TRIM3-215ENST00000639856 HEY2Q9UBP5 337 aa15.4■□□□□ 0.06
TRIM3-215ENST00000639856 PSAT1Q9Y617 370 aa15.4■□□□□ 0.06
TRIM3-215ENST00000639856 FAM92AA1XBS5 289 aa15.39■□□□□ 0.05
TRIM3-215ENST00000639856 USP12O75317 370 aa15.39■□□□□ 0.05
TRIM3-215ENST00000639856 TIMP1P01033 207 aa15.39■□□□□ 0.05
TRIM3-215ENST00000639856 BPGMP07738 259 aa15.39■□□□□ 0.05
TRIM3-215ENST00000639856 OR1D2P34982 312 aa15.39■□□□□ 0.05
TRIM3-215ENST00000639856 RFC2P35250 354 aa15.39■□□□□ 0.05
TRIM3-215ENST00000639856 CHI3L2Q15782 390 aa15.39■□□□□ 0.05
TRIM3-215ENST00000639856 BRMS1LQ5PSV4 323 aa15.39■□□□□ 0.05
TRIM3-215ENST00000639856 ARTNQ5T4W7 220 aa15.39■□□□□ 0.05
TRIM3-215ENST00000639856 RASIP1Q5U651 963 aa15.39■□□□□ 0.05
TRIM3-215ENST00000639856 RWDD4Q6NW29 188 aaKnown RBP15.39■□□□□ 0.05
TRIM3-215ENST00000639856 DNAJC5GQ8N7S2 189 aa15.39■□□□□ 0.05
TRIM3-215ENST00000639856 DPF3Q92784 378 aa15.39■□□□□ 0.05
TRIM3-215ENST00000639856 ZNF689Q96CS4 500 aaPredicted RBP15.39■□□□□ 0.05
TRIM3-215ENST00000639856 CELF6Q96J87 481 aaKnown RBP15.39■□□□□ 0.05
TRIM3-215ENST00000639856 RC3H2Q9HBD1 1191 aaKnown RBP15.39■□□□□ 0.05
TRIM3-215ENST00000639856 BFARQ9NZS9 450 aa15.39■□□□□ 0.05
TRIM3-215ENST00000639856 VANGL2Q9ULK5 521 aa15.39■□□□□ 0.05
TRIM3-215ENST00000639856 ABHD14A-ACY1A0A1B0GW23 586 aa15.38■□□□□ 0.05
TRIM3-215ENST00000639856 TRAFD1O14545 582 aaPredicted RBP15.38■□□□□ 0.05
TRIM3-215ENST00000639856 TPP1O14773 563 aa15.38■□□□□ 0.05
TRIM3-215ENST00000639856 CBX6O95503 412 aa15.38■□□□□ 0.05
TRIM3-215ENST00000639856 TOP3BO95985 862 aaKnown RBP15.38■□□□□ 0.05
TRIM3-215ENST00000639856 ITGA2BP08514 1039 aa15.38■□□□□ 0.05
TRIM3-215ENST00000639856 ERVK-10P10266 1014 aa15.38■□□□□ 0.05
TRIM3-215ENST00000639856 LBX1P52954 281 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms