RNA–Protein interactions for RNA: ENST00000639695.1

RFC1-217, Transcript of replication factor C subunit 1, humanhuman

TSL 5 BASIC

Gene RFC1, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-217ENST00000639695 CDC16Q13042 620 aa6.84□□□□□ -1.31
RFC1-217ENST00000639695 PRPF4BQ13523 1007 aaKnown RBP6.84□□□□□ -1.31
RFC1-217ENST00000639695 PLCB4Q15147 1175 aa6.84□□□□□ -1.31
RFC1-217ENST00000639695 PTPRRQ15256 657 aa6.84□□□□□ -1.31
RFC1-217ENST00000639695 MED22Q15528 200 aa6.84□□□□□ -1.31
RFC1-217ENST00000639695 GXYLT1Q4G148 440 aa6.84□□□□□ -1.31
RFC1-217ENST00000639695 CCDC184Q52MB2 194 aa6.84□□□□□ -1.31
RFC1-217ENST00000639695 CDC73Q6P1J9 531 aa6.84□□□□□ -1.31
RFC1-217ENST00000639695 KYAT3Q6YP21 454 aaKnown RBP6.84□□□□□ -1.31
RFC1-217ENST00000639695 WDR53Q7Z5U6 358 aaPredicted RBP6.84□□□□□ -1.31
RFC1-217ENST00000639695 SFTPA1Q8IWL2 248 aa6.84□□□□□ -1.31
RFC1-217ENST00000639695 BRSK2Q8IWQ3 736 aa6.84□□□□□ -1.31
RFC1-217ENST00000639695 SCN4BQ8IWT1 228 aa6.84□□□□□ -1.31
RFC1-217ENST00000639695 RAB40AQ8WXH6 277 aa6.84□□□□□ -1.31
RFC1-217ENST00000639695 ARHGEF2Q92974 986 aaKnown RBP6.84□□□□□ -1.31
RFC1-217ENST00000639695 CNDP2Q96KP4 475 aaKnown RBP6.84□□□□□ -1.31
RFC1-217ENST00000639695 RNF26Q9BY78 433 aaPredicted RBP6.84□□□□□ -1.31
RFC1-217ENST00000639695 GIMAP2Q9UG22 337 aa6.84□□□□□ -1.31
RFC1-217ENST00000639695 BCAT2O15382 392 aaPredicted RBP6.83□□□□□ -1.32
RFC1-217ENST00000639695 TGFB1I1O43294 461 aa6.83□□□□□ -1.32
RFC1-217ENST00000639695 PEX1O43933 1283 aa6.83□□□□□ -1.32
RFC1-217ENST00000639695 PRAMEF2O60811 474 aa6.83□□□□□ -1.32
RFC1-217ENST00000639695 SPDEFO95238 335 aa6.83□□□□□ -1.32
RFC1-217ENST00000639695 CHRM2P08172 466 aa6.83□□□□□ -1.32
RFC1-217ENST00000639695 NR4A1P22736 598 aa6.83□□□□□ -1.32
RFC1-217ENST00000639695 MCCP23508 829 aa6.83□□□□□ -1.32
RFC1-217ENST00000639695 CTGFP29279 349 aa6.83□□□□□ -1.32
RFC1-217ENST00000639695 TM4SF1P30408 202 aa6.83□□□□□ -1.32
RFC1-217ENST00000639695 ACSL1P33121 698 aa6.83□□□□□ -1.32
RFC1-217ENST00000639695 CPOXP36551 454 aa6.83□□□□□ -1.32
RFC1-217ENST00000639695 ROR1Q01973 937 aa6.83□□□□□ -1.32
RFC1-217ENST00000639695 TMEM115Q12893 351 aaPredicted RBP6.83□□□□□ -1.32
RFC1-217ENST00000639695 LRMPQ12912 555 aa6.83□□□□□ -1.32
RFC1-217ENST00000639695 CNGA3Q16281 694 aa6.83□□□□□ -1.32
RFC1-217ENST00000639695 PLEKHS1Q5SXH7 462 aa6.83□□□□□ -1.32
RFC1-217ENST00000639695 MTFR2Q6P444 385 aa6.83□□□□□ -1.32
RFC1-217ENST00000639695 NCEH1Q6PIU2 408 aa6.83□□□□□ -1.32
RFC1-217ENST00000639695 LAS2Q8IYD9 372 aa6.83□□□□□ -1.32
RFC1-217ENST00000639695 VPS52Q8N1B4 723 aa6.83□□□□□ -1.32
RFC1-217ENST00000639695 FRMD1Q8N878 549 aa6.83□□□□□ -1.32
RFC1-217ENST00000639695 AKAP1Q92667 903 aaKnown RBP eCLIP6.83□□□□□ -1.32
RFC1-217ENST00000639695 MYEOVQ96EZ4 313 aa6.83□□□□□ -1.32
RFC1-217ENST00000639695 PBKQ96KB5 322 aa6.83□□□□□ -1.32
RFC1-217ENST00000639695 SNX18Q96RF0 628 aa6.83□□□□□ -1.32
RFC1-217ENST00000639695 ADAM2Q99965 735 aa6.83□□□□□ -1.32
RFC1-217ENST00000639695 MLST8Q9BVC4 326 aa6.83□□□□□ -1.32
RFC1-217ENST00000639695 ADGRE3Q9BY15 652 aa6.83□□□□□ -1.32
RFC1-217ENST00000639695 ALDH8A1Q9H2A2 487 aaPredicted RBP6.83□□□□□ -1.32
RFC1-217ENST00000639695 SH2D4AQ9H788 454 aa6.83□□□□□ -1.32
RFC1-217ENST00000639695 ARHGEF3Q9NR81 526 aa6.83□□□□□ -1.32
RFC1-217ENST00000639695 PEMTQ9UBM1 199 aa6.83□□□□□ -1.32
RFC1-217ENST00000639695 ZHX1Q9UKY1 873 aaPredicted RBP6.83□□□□□ -1.32
RFC1-217ENST00000639695 TMEM191CA6NGB0 347 aa6.82□□□□□ -1.32
RFC1-217ENST00000639695 TJP3O95049 919 aa6.82□□□□□ -1.32
RFC1-217ENST00000639695 NR2F6P10588 404 aa6.82□□□□□ -1.32
RFC1-217ENST00000639695 NR2F1P10589 423 aa6.82□□□□□ -1.32
RFC1-217ENST00000639695 RARGP13631 454 aa6.82□□□□□ -1.32
RFC1-217ENST00000639695 CYP2C18P33260 490 aa6.82□□□□□ -1.32
RFC1-217ENST00000639695 EIF2DP41214 584 aaKnown RBP6.82□□□□□ -1.32
RFC1-217ENST00000639695 SLC37A1P57057 533 aa6.82□□□□□ -1.32
RFC1-217ENST00000639695 AIMP2Q13155 320 aaKnown RBP6.82□□□□□ -1.32
RFC1-217ENST00000639695 RASA2Q15283 850 aa6.82□□□□□ -1.32
RFC1-217ENST00000639695 SLC18A3Q16572 532 aa6.82□□□□□ -1.32
RFC1-217ENST00000639695 GSTA3Q16772 222 aa6.82□□□□□ -1.32
RFC1-217ENST00000639695 AP5B1Q2VPB7 878 aa6.82□□□□□ -1.32
RFC1-217ENST00000639695 GLE1Q53GS7 698 aaKnown RBP6.82□□□□□ -1.32
RFC1-217ENST00000639695 UBAP2Q5T6F2 1119 aaKnown RBP6.82□□□□□ -1.32
RFC1-217ENST00000639695 C1QTNF12Q5T7M4 302 aa6.82□□□□□ -1.32
RFC1-217ENST00000639695 ZKSCAN2Q63HK3 967 aa6.82□□□□□ -1.32
RFC1-217ENST00000639695 TMEM81Q6P7N7 255 aa6.82□□□□□ -1.32
RFC1-217ENST00000639695 GJB7Q6PEY0 223 aa6.82□□□□□ -1.32
RFC1-217ENST00000639695 KLHL35Q6PF15 583 aa6.82□□□□□ -1.32
RFC1-217ENST00000639695 SARM1Q6SZW1 724 aa6.82□□□□□ -1.32
RFC1-217ENST00000639695 RHOUQ7L0Q8 258 aa6.82□□□□□ -1.32
RFC1-217ENST00000639695 ZNF551Q7Z340 670 aaPredicted RBP6.82□□□□□ -1.32
RFC1-217ENST00000639695 GPR149Q86SP6 731 aa6.82□□□□□ -1.32
RFC1-217ENST00000639695 ZNF276Q8N554 614 aa6.82□□□□□ -1.32
RFC1-217ENST00000639695 WDTC1Q8N5D0 677 aa6.82□□□□□ -1.32
RFC1-217ENST00000639695 C11orf65Q8NCR3 313 aa6.82□□□□□ -1.32
RFC1-217ENST00000639695 NTN5Q8WTR8 489 aaPredicted RBP6.82□□□□□ -1.32
RFC1-217ENST00000639695 FAM149B1Q96BN6 582 aa6.82□□□□□ -1.32
RFC1-217ENST00000639695 INTS12Q96CB8 462 aaKnown RBP6.82□□□□□ -1.32
RFC1-217ENST00000639695 KLHL15Q96M94 604 aa6.82□□□□□ -1.32
RFC1-217ENST00000639695 CMTM3Q96MX0 182 aa6.82□□□□□ -1.32
RFC1-217ENST00000639695 CLSTN3Q9BQT9 956 aa6.82□□□□□ -1.32
RFC1-217ENST00000639695 HDHD5Q9BXW7 423 aa6.82□□□□□ -1.32
RFC1-217ENST00000639695 TRIM2Q9C040 744 aa6.82□□□□□ -1.32
RFC1-217ENST00000639695 TFCP2L1Q9NZI6 479 aa6.82□□□□□ -1.32
RFC1-217ENST00000639695 MORF4L1Q9UBU8 362 aa6.82□□□□□ -1.32
RFC1-217ENST00000639695 CHORDC1Q9UHD1 332 aaPredicted RBP6.82□□□□□ -1.32
RFC1-217ENST00000639695 SLCO3A1Q9UIG8 710 aa6.82□□□□□ -1.32
RFC1-217ENST00000639695 B3GNT3Q9Y2A9 372 aa6.82□□□□□ -1.32
RFC1-217ENST00000639695 FAM237BA0A1B0GVD1 139 aa6.81□□□□□ -1.32
RFC1-217ENST00000639695 UNC119BA6NIH7 251 aa6.81□□□□□ -1.32
RFC1-217ENST00000639695 EIF3CLB5ME19 914 aaKnown RBP6.81□□□□□ -1.32
RFC1-217ENST00000639695 H7C0S8 307 aa6.81□□□□□ -1.32
RFC1-217ENST00000639695 DSCR3O14972 297 aa6.81□□□□□ -1.32
RFC1-217ENST00000639695 MPPED1O15442 326 aa6.81□□□□□ -1.32
RFC1-217ENST00000639695 STRNO43815 780 aa6.81□□□□□ -1.32
RFC1-217ENST00000639695 LPXNO60711 386 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms