RNA–Protein interactions for RNA: ENST00000639659.1

SYNE2-228, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-228ENST00000639659 FRS2Q8WU20 508 aa15.43■□□□□ 0.06
SYNE2-228ENST00000639659 RFFLQ8WZ73 363 aa15.43■□□□□ 0.06
SYNE2-228ENST00000639659 DEPDC7Q96QD5 511 aa15.43■□□□□ 0.06
SYNE2-228ENST00000639659 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.43■□□□□ 0.06
SYNE2-228ENST00000639659 SCAND2PQ9GZW5 306 aaPredicted RBP15.43■□□□□ 0.06
SYNE2-228ENST00000639659 MUC3BQ9H195 1237 aa15.43■□□□□ 0.06
SYNE2-228ENST00000639659 METTL14Q9HCE5 456 aaKnown RBP15.43■□□□□ 0.06
SYNE2-228ENST00000639659 DYRK4Q9NR20 520 aa15.43■□□□□ 0.06
SYNE2-228ENST00000639659 DDIT4Q9NX09 232 aa15.43■□□□□ 0.06
SYNE2-228ENST00000639659 VANGL2Q9ULK5 521 aa15.43■□□□□ 0.06
SYNE2-228ENST00000639659 C10orf142B7Z368 130 aa15.42■□□□□ 0.06
SYNE2-228ENST00000639659 KLK10O43240 276 aa15.42■□□□□ 0.06
SYNE2-228ENST00000639659 THAP12O43422 761 aa15.42■□□□□ 0.06
SYNE2-228ENST00000639659 CSO75390 466 aaKnown RBP15.42■□□□□ 0.06
SYNE2-228ENST00000639659 GRAP2O75791 330 aa15.42■□□□□ 0.06
SYNE2-228ENST00000639659 ALPPL2P10696 532 aa15.42■□□□□ 0.06
SYNE2-228ENST00000639659 AKT2P31751 481 aa15.42■□□□□ 0.06
SYNE2-228ENST00000639659 GPD2P43304 727 aa15.42■□□□□ 0.06
SYNE2-228ENST00000639659 IRAK1P51617 712 aa15.42■□□□□ 0.06
SYNE2-228ENST00000639659 TMPRSS3P57727 454 aa15.42■□□□□ 0.06
SYNE2-228ENST00000639659 CLDN2P57739 230 aa15.42■□□□□ 0.06
SYNE2-228ENST00000639659 CDK17Q00537 523 aa15.42■□□□□ 0.06
SYNE2-228ENST00000639659 LRRC63Q05C16 580 aa15.42■□□□□ 0.06
SYNE2-228ENST00000639659 KCNMA1Q12791 1236 aa15.42■□□□□ 0.06
SYNE2-228ENST00000639659 TAF5Q15542 800 aa15.42■□□□□ 0.06
SYNE2-228ENST00000639659 TTC39BQ5VTQ0 682 aaPredicted RBP15.42■□□□□ 0.06
SYNE2-228ENST00000639659 KLHL10Q6JEL2 608 aa15.42■□□□□ 0.06
SYNE2-228ENST00000639659 FBXL22Q6P050 247 aa15.42■□□□□ 0.06
SYNE2-228ENST00000639659 PTAR1Q7Z6K3 402 aaPredicted RBP15.42■□□□□ 0.06
SYNE2-228ENST00000639659 OR13H1Q8NG92 308 aa15.42■□□□□ 0.06
SYNE2-228ENST00000639659 KCNE4Q8WWG9 221 aa15.42■□□□□ 0.06
SYNE2-228ENST00000639659 SMARCE1Q969G3 411 aa15.42■□□□□ 0.06
SYNE2-228ENST00000639659 GTPBP4Q9BZE4 634 aaKnown RBP15.42■□□□□ 0.06
SYNE2-228ENST00000639659 ABCG4Q9H172 646 aa15.42■□□□□ 0.06
SYNE2-228ENST00000639659 PREBQ9HCU5 417 aa15.42■□□□□ 0.06
SYNE2-228ENST00000639659 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.42■□□□□ 0.06
SYNE2-228ENST00000639659 DNAJC28Q9NX36 388 aa15.42■□□□□ 0.06
SYNE2-228ENST00000639659 ZDHHC9Q9Y397 364 aa15.42■□□□□ 0.06
SYNE2-228ENST00000639659 MGAQ8IWI9 3026 aa15.42■□□□□ 0.06
SYNE2-228ENST00000639659 ZNF462Q96JM2 2506 aa15.42■□□□□ 0.06
SYNE2-228ENST00000639659 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.41■□□□□ 0.06
SYNE2-228ENST00000639659 J3QKU1 62 aa15.41■□□□□ 0.06
SYNE2-228ENST00000639659 PSMA7O14818 248 aa15.41■□□□□ 0.06
SYNE2-228ENST00000639659 OPA1O60313 960 aa15.41■□□□□ 0.06
SYNE2-228ENST00000639659 PCDH8O95206 1070 aa15.41■□□□□ 0.06
SYNE2-228ENST00000639659 SMC2O95347 1197 aa15.41■□□□□ 0.06
SYNE2-228ENST00000639659 OXCT1P55809 520 aa15.41■□□□□ 0.06
SYNE2-228ENST00000639659 TAS2R38P59533 333 aa15.41■□□□□ 0.06
SYNE2-228ENST00000639659 YWHAZP63104 245 aaKnown RBP15.41■□□□□ 0.06
SYNE2-228ENST00000639659 NME3Q13232 169 aa15.41■□□□□ 0.06
SYNE2-228ENST00000639659 ZNF177Q13360 481 aaPredicted RBP15.41■□□□□ 0.06
SYNE2-228ENST00000639659 STIM1Q13586 685 aa15.41■□□□□ 0.06
SYNE2-228ENST00000639659 OR6B2Q6IFH4 312 aa15.41■□□□□ 0.06
SYNE2-228ENST00000639659 FOXR1Q6PIV2 292 aa15.41■□□□□ 0.06
SYNE2-228ENST00000639659 PCSK4Q6UW60 755 aa15.41■□□□□ 0.06
SYNE2-228ENST00000639659 DEFB106AQ8N104 65 aa15.41■□□□□ 0.06
SYNE2-228ENST00000639659 ATP11CQ8NB49 1132 aa15.41■□□□□ 0.06
SYNE2-228ENST00000639659 OR52K2Q8NGK3 314 aa15.41■□□□□ 0.06
SYNE2-228ENST00000639659 GRIN3AQ8TCU5 1115 aa15.41■□□□□ 0.06
SYNE2-228ENST00000639659 APOLD1Q96LR9 279 aa15.41■□□□□ 0.06
SYNE2-228ENST00000639659 NOX5Q96PH1 765 aa15.41■□□□□ 0.06
SYNE2-228ENST00000639659 MED15Q96RN5 788 aa15.41■□□□□ 0.06
SYNE2-228ENST00000639659 PPP1R9BQ96SB3 815 aa15.41■□□□□ 0.06
SYNE2-228ENST00000639659 PRMT1Q99873 361 aaKnown RBP15.41■□□□□ 0.06
SYNE2-228ENST00000639659 SIK2Q9H0K1 926 aa15.41■□□□□ 0.06
SYNE2-228ENST00000639659 PPM1HQ9ULR3 514 aa15.41■□□□□ 0.06
SYNE2-228ENST00000639659 FARP1Q9Y4F1 1045 aaPredicted RBP15.41■□□□□ 0.06
SYNE2-228ENST00000639659 ERVH48-1M5A8F1 160 aa15.4■□□□□ 0.06
SYNE2-228ENST00000639659 MCF2LO15068 1137 aa15.4■□□□□ 0.06
SYNE2-228ENST00000639659 MED7O43513 233 aa15.4■□□□□ 0.06
SYNE2-228ENST00000639659 ATP9BO43861 1147 aa15.4■□□□□ 0.06
SYNE2-228ENST00000639659 PIAS2O75928 621 aa15.4■□□□□ 0.06
SYNE2-228ENST00000639659 NEBLO76041 1014 aa15.4■□□□□ 0.06
SYNE2-228ENST00000639659 CCR1P32246 355 aa15.4■□□□□ 0.06
SYNE2-228ENST00000639659 USP8P40818 1118 aa15.4■□□□□ 0.06
SYNE2-228ENST00000639659 MAPK8IP2Q13387 824 aaPredicted RBP15.4■□□□□ 0.06
SYNE2-228ENST00000639659 LY6DQ14210 128 aa15.4■□□□□ 0.06
SYNE2-228ENST00000639659 C3orf38Q5JPI3 329 aa15.4■□□□□ 0.06
SYNE2-228ENST00000639659 PIP5KL1Q5T9C9 394 aa15.4■□□□□ 0.06
SYNE2-228ENST00000639659 SEL1L3Q68CR1 1132 aa15.4■□□□□ 0.06
SYNE2-228ENST00000639659 SH2D3CQ8N5H7 860 aa15.4■□□□□ 0.06
SYNE2-228ENST00000639659 TMEM145Q8NBT3 493 aa15.4■□□□□ 0.06
SYNE2-228ENST00000639659 MAPK15Q8TD08 544 aa15.4■□□□□ 0.06
SYNE2-228ENST00000639659 FAM131CQ96AQ9 280 aa15.4■□□□□ 0.06
SYNE2-228ENST00000639659 ARRDC3Q96B67 414 aa15.4■□□□□ 0.06
SYNE2-228ENST00000639659 CCDC114Q96M63 670 aa15.4■□□□□ 0.06
SYNE2-228ENST00000639659 KREMEN1Q96MU8 473 aa15.4■□□□□ 0.06
SYNE2-228ENST00000639659 ZNF578Q96N58 590 aaPredicted RBP15.4■□□□□ 0.06
SYNE2-228ENST00000639659 GSDMAQ96QA5 445 aa15.4■□□□□ 0.06
SYNE2-228ENST00000639659 FEM1AQ9BSK4 669 aa15.4■□□□□ 0.06
SYNE2-228ENST00000639659 INTS2Q9H0H0 1204 aaKnown RBP15.4■□□□□ 0.06
SYNE2-228ENST00000639659 THAP9Q9H5L6 903 aa15.4■□□□□ 0.06
SYNE2-228ENST00000639659 ACP6Q9NPH0 428 aa15.4■□□□□ 0.06
SYNE2-228ENST00000639659 KLHL11Q9NVR0 708 aa15.4■□□□□ 0.06
SYNE2-228ENST00000639659 ATP6V1DQ9Y5K8 247 aa15.4■□□□□ 0.06
SYNE2-228ENST00000639659 TENM4Q6N022 2769 aa15.39■□□□□ 0.05
SYNE2-228ENST00000639659 ATMQ13315 3056 aa15.39■□□□□ 0.05
SYNE2-228ENST00000639659 GOLGA6L4A6NEF3 574 aa15.39■□□□□ 0.05
SYNE2-228ENST00000639659 ALOX15BO15296 676 aa15.39■□□□□ 0.05
SYNE2-228ENST00000639659 SNAP91O60641 907 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms