RNA–Protein interactions for RNA: ENST00000638680.1

SCARB2-213, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 5,817 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-213ENST00000638680 CAPSLQ8WWF8 208 aa18.77■□□□□ 0.6
SCARB2-213ENST00000638680 MAN1C1Q9NR34 630 aa18.77■□□□□ 0.6
SCARB2-213ENST00000638680 TLR8Q9NR97 1041 aaKnown RBP18.77■□□□□ 0.6
SCARB2-213ENST00000638680 EHD3Q9NZN3 535 aa18.77■□□□□ 0.6
SCARB2-213ENST00000638680 PLA2G4CQ9UP65 541 aa18.77■□□□□ 0.6
SCARB2-213ENST00000638680 NWD1Q149M9 1564 aa18.77■□□□□ 0.6
SCARB2-213ENST00000638680 SMIM31A0A1B0GVY4 71 aa18.77■□□□□ 0.59
SCARB2-213ENST00000638680 SIGLEC16A6NMB1 481 aa18.77■□□□□ 0.59
SCARB2-213ENST00000638680 ADCY6O43306 1168 aa18.77■□□□□ 0.59
SCARB2-213ENST00000638680 CKMP06732 381 aa18.77■□□□□ 0.59
SCARB2-213ENST00000638680 PABPC1P11940 636 aaKnown RBP18.77■□□□□ 0.59
SCARB2-213ENST00000638680 LBPP18428 481 aa18.77■□□□□ 0.59
SCARB2-213ENST00000638680 GLRA2P23416 452 aa18.77■□□□□ 0.59
SCARB2-213ENST00000638680 S100A3P33764 101 aa18.77■□□□□ 0.59
SCARB2-213ENST00000638680 GRIA4P48058 902 aa18.77■□□□□ 0.59
SCARB2-213ENST00000638680 ZSWIM7Q19AV6 140 aa18.77■□□□□ 0.59
SCARB2-213ENST00000638680 CACTIN-AS1Q8N1I8 211 aa18.77■□□□□ 0.59
SCARB2-213ENST00000638680 PHACTR1Q9C0D0 580 aa18.77■□□□□ 0.59
SCARB2-213ENST00000638680 TMEM191CA6NGB0 347 aa18.76■□□□□ 0.59
SCARB2-213ENST00000638680 TTLL13PA6NNM8 815 aa18.76■□□□□ 0.59
SCARB2-213ENST00000638680 TAF4O00268 1085 aa18.76■□□□□ 0.59
SCARB2-213ENST00000638680 SNRPB2P08579 225 aaKnown RBP18.76■□□□□ 0.59
SCARB2-213ENST00000638680 ETS2P15036 469 aa18.76■□□□□ 0.59
SCARB2-213ENST00000638680 DRG2P55039 364 aaKnown RBP18.76■□□□□ 0.59
SCARB2-213ENST00000638680 ROR2Q01974 943 aaKnown RBP18.76■□□□□ 0.59
SCARB2-213ENST00000638680 GSTA3Q16772 222 aa18.76■□□□□ 0.59
SCARB2-213ENST00000638680 CDH24Q86UP0 819 aa18.76■□□□□ 0.59
SCARB2-213ENST00000638680 PSTKQ8IV42 348 aaKnown RBP18.76■□□□□ 0.59
SCARB2-213ENST00000638680 ULK2Q8IYT8 1036 aa18.76■□□□□ 0.59
SCARB2-213ENST00000638680 OLFM1Q99784 485 aa18.76■□□□□ 0.59
SCARB2-213ENST00000638680 GINS4Q9BRT9 223 aa18.76■□□□□ 0.59
SCARB2-213ENST00000638680 SETD4Q9NVD3 440 aa18.76■□□□□ 0.59
SCARB2-213ENST00000638680 ADRB2P07550 413 aa18.76■□□□□ 0.59
SCARB2-213ENST00000638680 SERPINA6P08185 405 aa18.76■□□□□ 0.59
SCARB2-213ENST00000638680 TTKP33981 857 aa18.76■□□□□ 0.59
SCARB2-213ENST00000638680 TOP3AQ13472 1001 aaPredicted RBP18.76■□□□□ 0.59
SCARB2-213ENST00000638680 PFKFB4Q16877 469 aa18.76■□□□□ 0.59
SCARB2-213ENST00000638680 ZPBP2Q6X784 338 aa18.76■□□□□ 0.59
SCARB2-213ENST00000638680 SAPCD2Q86UD0 394 aa18.76■□□□□ 0.59
SCARB2-213ENST00000638680 ASB7Q9H672 318 aa18.76■□□□□ 0.59
SCARB2-213ENST00000638680 KLHL28Q9NXS3 571 aa18.76■□□□□ 0.59
SCARB2-213ENST00000638680 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.76■□□□□ 0.59
SCARB2-213ENST00000638680 IQGAP1P46940 1657 aa18.76■□□□□ 0.59
SCARB2-213ENST00000638680 CLK2P49760 499 aaKnown RBP18.76■□□□□ 0.59
SCARB2-213ENST00000638680 BROXQ5VW32 411 aa18.76■□□□□ 0.59
SCARB2-213ENST00000638680 DNERQ8NFT8 737 aa18.76■□□□□ 0.59
SCARB2-213ENST00000638680 OR7A2PQ8NGA2 310 aa18.76■□□□□ 0.59
SCARB2-213ENST00000638680 NUAK2Q9H093 628 aa18.76■□□□□ 0.59
SCARB2-213ENST00000638680 TKTL2Q9H0I9 626 aa18.76■□□□□ 0.59
SCARB2-213ENST00000638680 MTF2Q9Y483 593 aaPredicted RBP18.76■□□□□ 0.59
SCARB2-213ENST00000638680 A0A0A0MRY4 1105 aa18.76■□□□□ 0.59
SCARB2-213ENST00000638680 RGSL1A5PLK6 1076 aa18.76■□□□□ 0.59
SCARB2-213ENST00000638680 TRIM38O00635 465 aa18.76■□□□□ 0.59
SCARB2-213ENST00000638680 IL1R1P14778 569 aa18.76■□□□□ 0.59
SCARB2-213ENST00000638680 KPNA1P52294 538 aaPredicted RBP18.76■□□□□ 0.59
SCARB2-213ENST00000638680 ABRAXAS1Q6UWZ7 409 aa18.76■□□□□ 0.59
SCARB2-213ENST00000638680 GPSM1Q86YR5 675 aa18.76■□□□□ 0.59
SCARB2-213ENST00000638680 LZTR1Q8N653 840 aa18.76■□□□□ 0.59
SCARB2-213ENST00000638680 SMARCD1Q96GM5 515 aa18.76■□□□□ 0.59
SCARB2-213ENST00000638680 SPATA13Q96N96 652 aa18.76■□□□□ 0.59
SCARB2-213ENST00000638680 RAD21L1Q9H4I0 556 aa18.76■□□□□ 0.59
SCARB2-213ENST00000638680 REEP1Q9H902 201 aa18.76■□□□□ 0.59
SCARB2-213ENST00000638680 SPAG4Q9NPE6 437 aa18.76■□□□□ 0.59
SCARB2-213ENST00000638680 DYTNA2CJ06 578 aa18.76■□□□□ 0.59
SCARB2-213ENST00000638680 ITGAVP06756 1048 aa18.76■□□□□ 0.59
SCARB2-213ENST00000638680 LTA4HP09960 611 aaKnown RBP18.76■□□□□ 0.59
SCARB2-213ENST00000638680 DPEP1P16444 411 aa18.76■□□□□ 0.59
SCARB2-213ENST00000638680 BOP1Q14137 746 aaKnown RBP18.76■□□□□ 0.59
SCARB2-213ENST00000638680 PERM1Q5SV97 790 aa18.76■□□□□ 0.59
SCARB2-213ENST00000638680 UNC5AQ6ZN44 842 aa18.76■□□□□ 0.59
SCARB2-213ENST00000638680 NIPA1Q7RTP0 329 aa18.76■□□□□ 0.59
SCARB2-213ENST00000638680 MRPS31Q92665 395 aaKnown RBP18.76■□□□□ 0.59
SCARB2-213ENST00000638680 ZNF624Q9P2J8 865 aaPredicted RBP18.76■□□□□ 0.59
SCARB2-213ENST00000638680 ILF2Q12905 390 aaKnown RBP18.75■□□□□ 0.59
SCARB2-213ENST00000638680 CDK20Q8IZL9 346 aa18.75■□□□□ 0.59
SCARB2-213ENST00000638680 TRAPPC12Q8WVT3 735 aa18.75■□□□□ 0.59
SCARB2-213ENST00000638680 CENPIQ92674 756 aaPredicted RBP18.75■□□□□ 0.59
SCARB2-213ENST00000638680 VAT1Q99536 393 aa18.75■□□□□ 0.59
SCARB2-213ENST00000638680 IL22Q9GZX6 179 aa18.75■□□□□ 0.59
SCARB2-213ENST00000638680 REXO2Q9Y3B8 237 aaKnown RBP18.75■□□□□ 0.59
SCARB2-213ENST00000638680 UBXN8O00124 270 aa18.75■□□□□ 0.59
SCARB2-213ENST00000638680 ITGA1P56199 1179 aa18.75■□□□□ 0.59
SCARB2-213ENST00000638680 ARCQ7LC44 396 aa18.75■□□□□ 0.59
SCARB2-213ENST00000638680 SENP6Q9GZR1 1112 aaPredicted RBP18.75■□□□□ 0.59
SCARB2-213ENST00000638680 ENTPD7Q9NQZ7 604 aa18.75■□□□□ 0.59
SCARB2-213ENST00000638680 VPS45Q9NRW7 570 aa18.75■□□□□ 0.59
SCARB2-213ENST00000638680 SNCAIPQ9Y6H5 919 aa18.75■□□□□ 0.59
SCARB2-213ENST00000638680 TRUB2O95900 331 aaKnown RBP18.75■□□□□ 0.59
SCARB2-213ENST00000638680 FAM71AQ8IYT1 594 aa18.75■□□□□ 0.59
SCARB2-213ENST00000638680 CERS2Q96G23 380 aa18.75■□□□□ 0.59
SCARB2-213ENST00000638680 TEKT5Q96M29 485 aa18.75■□□□□ 0.59
SCARB2-213ENST00000638680 POPDC2Q9HBU9 364 aa18.75■□□□□ 0.59
SCARB2-213ENST00000638680 FBXO6Q9NRD1 293 aaPredicted RBP18.75■□□□□ 0.59
SCARB2-213ENST00000638680 ACKR2O00590 384 aa18.75■□□□□ 0.59
SCARB2-213ENST00000638680 FYNP06241 537 aa18.75■□□□□ 0.59
SCARB2-213ENST00000638680 NOS3P29474 1203 aa18.75■□□□□ 0.59
SCARB2-213ENST00000638680 MMP13P45452 471 aa18.75■□□□□ 0.59
SCARB2-213ENST00000638680 PLGRKTQ9HBL7 147 aa18.75■□□□□ 0.59
SCARB2-213ENST00000638680 ATP13A1Q9HD20 1204 aa18.75■□□□□ 0.59
SCARB2-213ENST00000638680 RSL24D1Q9UHA3 163 aaKnown RBP18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms