RNA–Protein interactions for RNA: ENST00000637572.1

CHD2-227, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 4,452 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-227ENST00000637572 BCLAF3A2AJT9 711 aaKnown RBP5.63□□□□□ -1.51
CHD2-227ENST00000637572 TCAF2A6NFQ2 919 aa5.63□□□□□ -1.51
CHD2-227ENST00000637572 F5H423 210 aaPredicted RBP5.63□□□□□ -1.51
CHD2-227ENST00000637572 TMEM189-UBE2V1I3L0A0 370 aa5.63□□□□□ -1.51
CHD2-227ENST00000637572 RNF225M0QZC1 329 aaPredicted RBP5.63□□□□□ -1.51
CHD2-227ENST00000637572 ACSL4O60488 711 aa5.63□□□□□ -1.51
CHD2-227ENST00000637572 PAGE1O75459 146 aa5.63□□□□□ -1.51
CHD2-227ENST00000637572 STBD1O95210 358 aa5.63□□□□□ -1.51
CHD2-227ENST00000637572 TIMP1P01033 207 aa5.63□□□□□ -1.51
CHD2-227ENST00000637572 ABHD2P08910 425 aa5.63□□□□□ -1.51
CHD2-227ENST00000637572 ACADMP11310 421 aa5.63□□□□□ -1.51
CHD2-227ENST00000637572 CCNB1P14635 433 aa5.63□□□□□ -1.51
CHD2-227ENST00000637572 H2AFXP16104 143 aaPredicted RBP5.63□□□□□ -1.51
CHD2-227ENST00000637572 HLA-DPA1P20036 260 aa5.63□□□□□ -1.51
CHD2-227ENST00000637572 RBL1P28749 1068 aa5.63□□□□□ -1.51
CHD2-227ENST00000637572 FLT3P36888 993 aa5.63□□□□□ -1.51
CHD2-227ENST00000637572 GP5P40197 560 aa5.63□□□□□ -1.51
CHD2-227ENST00000637572 UPP1Q16831 310 aa5.63□□□□□ -1.51
CHD2-227ENST00000637572 PCID2Q5JVF3 399 aa5.63□□□□□ -1.51
CHD2-227ENST00000637572 LYPLAL1Q5VWZ2 237 aa5.63□□□□□ -1.51
CHD2-227ENST00000637572 TTC19Q6DKK2 380 aaPredicted RBP5.63□□□□□ -1.51
CHD2-227ENST00000637572 POTEHQ6S545 545 aa5.63□□□□□ -1.51
CHD2-227ENST00000637572 CLEC20AQ6ZU45 233 aa5.63□□□□□ -1.51
CHD2-227ENST00000637572 BPHLQ86WA6 291 aaPredicted RBP5.63□□□□□ -1.51
CHD2-227ENST00000637572 TMEM192Q8IY95 271 aa5.63□□□□□ -1.51
CHD2-227ENST00000637572 JOSD2Q8TAC2 188 aa5.63□□□□□ -1.51
CHD2-227ENST00000637572 ZNF461Q8TAF7 563 aa5.63□□□□□ -1.51
CHD2-227ENST00000637572 CELF6Q96J87 481 aaKnown RBP5.63□□□□□ -1.51
CHD2-227ENST00000637572 FAR2Q96K12 515 aa5.63□□□□□ -1.51
CHD2-227ENST00000637572 C1QTNF1Q9BXJ1 281 aa5.63□□□□□ -1.51
CHD2-227ENST00000637572 CDC42EP4Q9H3Q1 356 aaKnown RBP5.63□□□□□ -1.51
CHD2-227ENST00000637572 STN1Q9H668 368 aaKnown RBP5.63□□□□□ -1.51
CHD2-227ENST00000637572 LATS2Q9NRM7 1088 aa5.63□□□□□ -1.51
CHD2-227ENST00000637572 ETNK2Q9NVF9 386 aa5.63□□□□□ -1.51
CHD2-227ENST00000637572 KCTD5Q9NXV2 234 aa5.63□□□□□ -1.51
CHD2-227ENST00000637572 FLRT1Q9NZU1 646 aa5.63□□□□□ -1.51
CHD2-227ENST00000637572 GMIPQ9P107 970 aa5.63□□□□□ -1.51
CHD2-227ENST00000637572 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.63□□□□□ -1.51
CHD2-227ENST00000637572 SIX4Q9UIU6 781 aa5.63□□□□□ -1.51
CHD2-227ENST00000637572 NAALADL1Q9UQQ1 740 aa5.63□□□□□ -1.51
CHD2-227ENST00000637572 SCML2Q9UQR0 700 aa5.63□□□□□ -1.51
CHD2-227ENST00000637572 TLR6Q9Y2C9 796 aa5.63□□□□□ -1.51
CHD2-227ENST00000637572 DDX60LQ5H9U9 1706 aaKnown RBP5.62□□□□□ -1.51
CHD2-227ENST00000637572 CLGNO14967 610 aa5.62□□□□□ -1.51
CHD2-227ENST00000637572 GRM6O15303 877 aa5.62□□□□□ -1.51
CHD2-227ENST00000637572 PAPSS1O43252 624 aaPredicted RBP5.62□□□□□ -1.51
CHD2-227ENST00000637572 PPFIA2O75334 1257 aa5.62□□□□□ -1.51
CHD2-227ENST00000637572 RHOBTB1O94844 696 aa5.62□□□□□ -1.51
CHD2-227ENST00000637572 MPOP05164 745 aa5.62□□□□□ -1.51
CHD2-227ENST00000637572 C8AP07357 584 aa5.62□□□□□ -1.51
CHD2-227ENST00000637572 MYL2P10916 166 aa5.62□□□□□ -1.51
CHD2-227ENST00000637572 STMN1P16949 149 aa5.62□□□□□ -1.51
CHD2-227ENST00000637572 ZNF7P17097 686 aaPredicted RBP5.62□□□□□ -1.51
CHD2-227ENST00000637572 CCNCP24863 283 aa5.62□□□□□ -1.51
CHD2-227ENST00000637572 HOXA11P31270 313 aaPredicted RBP5.62□□□□□ -1.51
CHD2-227ENST00000637572 PTPN7P35236 360 aa5.62□□□□□ -1.51
CHD2-227ENST00000637572 SERPINH1P50454 418 aaKnown RBP5.62□□□□□ -1.51
CHD2-227ENST00000637572 NSUN2Q08J23 767 aaKnown RBP eCLIP5.62□□□□□ -1.51
CHD2-227ENST00000637572 ZKSCAN8Q15776 578 aaPredicted RBP5.62□□□□□ -1.51
CHD2-227ENST00000637572 FAM26DQ5JW98 314 aa5.62□□□□□ -1.51
CHD2-227ENST00000637572 MFSD5Q6N075 450 aa5.62□□□□□ -1.51
CHD2-227ENST00000637572 KDELC2Q7Z4H8 507 aa5.62□□□□□ -1.51
CHD2-227ENST00000637572 PRUNE1Q86TP1 453 aa5.62□□□□□ -1.51
CHD2-227ENST00000637572 DENND1CQ8IV53 801 aa5.62□□□□□ -1.51
CHD2-227ENST00000637572 C12orf50Q8NA57 414 aaPredicted RBP5.62□□□□□ -1.51
CHD2-227ENST00000637572 ANKK1Q8NFD2 765 aa5.62□□□□□ -1.51
CHD2-227ENST00000637572 PHOSPHO2Q8TCD6 241 aa5.62□□□□□ -1.51
CHD2-227ENST00000637572 CASP10Q92851 521 aa5.62□□□□□ -1.51
CHD2-227ENST00000637572 IGSF21Q96ID5 467 aa5.62□□□□□ -1.51
CHD2-227ENST00000637572 TGS1Q96RS0 853 aaKnown RBP5.62□□□□□ -1.51
CHD2-227ENST00000637572 CPNE1Q99829 537 aa5.62□□□□□ -1.51
CHD2-227ENST00000637572 B3GNT5Q9BYG0 378 aa5.62□□□□□ -1.51
CHD2-227ENST00000637572 SLC13A1Q9BZW2 595 aa5.62□□□□□ -1.51
CHD2-227ENST00000637572 OSBPL2Q9H1P3 480 aa5.62□□□□□ -1.51
CHD2-227ENST00000637572 PRDM12Q9H4Q4 367 aa5.62□□□□□ -1.51
CHD2-227ENST00000637572 IGFLR1Q9H665 355 aa5.62□□□□□ -1.51
CHD2-227ENST00000637572 TMPRSS4Q9NRS4 437 aa5.62□□□□□ -1.51
CHD2-227ENST00000637572 PKD2L2Q9NZM6 624 aa5.62□□□□□ -1.51
CHD2-227ENST00000637572 THEGQ9P2T0 379 aa5.62□□□□□ -1.51
CHD2-227ENST00000637572 CNTN6Q9UQ52 1028 aa5.62□□□□□ -1.51
CHD2-227ENST00000637572 KCNU1A8MYU2 1149 aa5.62□□□□□ -1.51
CHD2-227ENST00000637572 C9IYK1 514 aa5.62□□□□□ -1.51
CHD2-227ENST00000637572 CHRNA1P02708 482 aa5.62□□□□□ -1.51
CHD2-227ENST00000637572 FGF1P05230 155 aa5.62□□□□□ -1.51
CHD2-227ENST00000637572 PFKLP17858 780 aa5.62□□□□□ -1.51
CHD2-227ENST00000637572 CRABP2P29373 138 aa5.62□□□□□ -1.51
CHD2-227ENST00000637572 GABRB2P47870 512 aa5.62□□□□□ -1.51
CHD2-227ENST00000637572 SLC11A1P49279 550 aa5.62□□□□□ -1.51
CHD2-227ENST00000637572 ZNF33AQ06730 810 aa5.62□□□□□ -1.51
CHD2-227ENST00000637572 GPM6BQ13491 265 aa5.62□□□□□ -1.51
CHD2-227ENST00000637572 RFTN1Q14699 578 aaPredicted RBP5.62□□□□□ -1.51
CHD2-227ENST00000637572 SH2D4BQ5SQS7 431 aa5.62□□□□□ -1.51
CHD2-227ENST00000637572 HP1BP3Q5SSJ5 553 aaPredicted RBP5.62□□□□□ -1.51
CHD2-227ENST00000637572 GPR158Q5T848 1215 aa5.62□□□□□ -1.51
CHD2-227ENST00000637572 TRAF7Q6Q0C0 670 aa5.62□□□□□ -1.51
CHD2-227ENST00000637572 AGMOQ6ZNB7 445 aa5.62□□□□□ -1.51
CHD2-227ENST00000637572 FAM9CQ8IZT9 166 aa5.62□□□□□ -1.51
CHD2-227ENST00000637572 PRELID2Q8N945 189 aa5.62□□□□□ -1.51
CHD2-227ENST00000637572 SMG8Q8ND04 991 aaKnown RBP5.62□□□□□ -1.51
CHD2-227ENST00000637572 SLC35F5Q8WV83 523 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms