RNA–Protein interactions for RNA: ENST00000637494.1

CLN6-221, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5 BASIC

Gene CLN6, Length 765 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-221ENST00000637494 TBC1D3Q8IZP1 549 aaPredicted RBP19.44■□□□□ 0.7
CLN6-221ENST00000637494 AADATQ8N5Z0 425 aa19.44■□□□□ 0.7
CLN6-221ENST00000637494 EMC1Q8N766 993 aa19.44■□□□□ 0.7
CLN6-221ENST00000637494 DCAF4L2Q8NA75 395 aa19.44■□□□□ 0.7
CLN6-221ENST00000637494 OR52K2Q8NGK3 314 aa19.44■□□□□ 0.7
CLN6-221ENST00000637494 RXFP2Q8WXD0 754 aa19.44■□□□□ 0.7
CLN6-221ENST00000637494 KDM4CQ9H3R0 1056 aa19.44■□□□□ 0.7
CLN6-221ENST00000637494 ANLNQ9NQW6 1124 aa19.44■□□□□ 0.7
CLN6-221ENST00000637494 AASDHPPTQ9NRN7 309 aa19.44■□□□□ 0.7
CLN6-221ENST00000637494 MPP6Q9NZW5 540 aa19.44■□□□□ 0.7
CLN6-221ENST00000637494 HS3ST2Q9Y278 367 aa19.44■□□□□ 0.7
CLN6-221ENST00000637494 PCDHGB2Q9Y5G2 931 aa19.44■□□□□ 0.7
CLN6-221ENST00000637494 SNX10Q9Y5X0 201 aa19.44■□□□□ 0.7
CLN6-221ENST00000637494 IGLV3-10A0A075B6K4 115 aa19.43■□□□□ 0.7
CLN6-221ENST00000637494 MCF2LO15068 1137 aa19.43■□□□□ 0.7
CLN6-221ENST00000637494 FLRT2O43155 660 aa19.43■□□□□ 0.7
CLN6-221ENST00000637494 ENDOD1O94919 500 aa19.43■□□□□ 0.7
CLN6-221ENST00000637494 IGHV4-34P06331 123 aa19.43■□□□□ 0.7
CLN6-221ENST00000637494 RECQLP46063 649 aaPredicted RBP19.43■□□□□ 0.7
CLN6-221ENST00000637494 CLCN6P51797 869 aa19.43■□□□□ 0.7
CLN6-221ENST00000637494 ADPRHP54922 357 aa19.43■□□□□ 0.7
CLN6-221ENST00000637494 KIF19Q2TAC6 998 aa19.43■□□□□ 0.7
CLN6-221ENST00000637494 FILIP1LQ4L180 1135 aa19.43■□□□□ 0.7
CLN6-221ENST00000637494 RETSATQ6NUM9 610 aa19.43■□□□□ 0.7
CLN6-221ENST00000637494 Q6ZVU0 165 aa19.43■□□□□ 0.7
CLN6-221ENST00000637494 STRADAQ7RTN6 431 aa19.43■□□□□ 0.7
CLN6-221ENST00000637494 PHLDB2Q86SQ0 1253 aa19.43■□□□□ 0.7
CLN6-221ENST00000637494 DYRK4Q9NR20 520 aa19.43■□□□□ 0.7
CLN6-221ENST00000637494 TMPRSS4Q9NRS4 437 aa19.43■□□□□ 0.7
CLN6-221ENST00000637494 VPS51Q9UID3 782 aa19.43■□□□□ 0.7
CLN6-221ENST00000637494 SNX11Q9Y5W9 270 aa19.43■□□□□ 0.7
CLN6-221ENST00000637494 CNOT1A5YKK6 2376 aaKnown RBP19.42■□□□□ 0.7
CLN6-221ENST00000637494 NYNRINQ9P2P1 1898 aaKnown RBP19.42■□□□□ 0.7
CLN6-221ENST00000637494 ASCC3Q8N3C0 2202 aaKnown RBP19.42■□□□□ 0.7
CLN6-221ENST00000637494 ILVBLA1L0T0 632 aa19.42■□□□□ 0.7
CLN6-221ENST00000637494 SRCP12931 536 aa19.42■□□□□ 0.7
CLN6-221ENST00000637494 UNGP13051 313 aaPredicted RBP19.42■□□□□ 0.7
CLN6-221ENST00000637494 FERP16591 822 aa19.42■□□□□ 0.7
CLN6-221ENST00000637494 NUDT1P36639 197 aa19.42■□□□□ 0.7
CLN6-221ENST00000637494 ETFBP38117 255 aa19.42■□□□□ 0.7
CLN6-221ENST00000637494 PTPN9P43378 593 aa19.42■□□□□ 0.7
CLN6-221ENST00000637494 CCT8P50990 548 aa19.42■□□□□ 0.7
CLN6-221ENST00000637494 BNC1Q01954 994 aa19.42■□□□□ 0.7
CLN6-221ENST00000637494 CLEC16AQ2KHT3 1053 aa19.42■□□□□ 0.7
CLN6-221ENST00000637494 INAVAQ3KP66 663 aa19.42■□□□□ 0.7
CLN6-221ENST00000637494 ANO6Q4KMQ2 910 aa19.42■□□□□ 0.7
CLN6-221ENST00000637494 TRNP1Q6NT89 227 aa19.42■□□□□ 0.7
CLN6-221ENST00000637494 BNIPLQ7Z465 357 aa19.42■□□□□ 0.7
CLN6-221ENST00000637494 PRPF39Q86UA1 669 aaKnown RBP19.42■□□□□ 0.7
CLN6-221ENST00000637494 ZNF683Q8IZ20 524 aa19.42■□□□□ 0.7
CLN6-221ENST00000637494 PIP4K2CQ8TBX8 421 aa19.42■□□□□ 0.7
CLN6-221ENST00000637494 CAMK1GQ96NX5 476 aa19.42■□□□□ 0.7
CLN6-221ENST00000637494 AGPAT1Q99943 283 aa19.42■□□□□ 0.7
CLN6-221ENST00000637494 SPON2Q9BUD6 331 aa19.42■□□□□ 0.7
CLN6-221ENST00000637494 SCNM1Q9BWG6 230 aa19.42■□□□□ 0.7
CLN6-221ENST00000637494 RETREG1Q9H6L5 497 aa19.42■□□□□ 0.7
CLN6-221ENST00000637494 IL21RQ9HBE5 538 aa19.42■□□□□ 0.7
CLN6-221ENST00000637494 PPARGC1AQ9UBK2 798 aaKnown RBP19.42■□□□□ 0.7
CLN6-221ENST00000637494 APOBEC2Q9Y235 224 aaKnown RBP19.42■□□□□ 0.7
CLN6-221ENST00000637494 FNDC3AQ9Y2H6 1198 aaKnown RBP19.42■□□□□ 0.7
CLN6-221ENST00000637494 I6L893 689 aaPredicted RBP19.41■□□□□ 0.7
CLN6-221ENST00000637494 CBX4O00257 560 aa19.41■□□□□ 0.7
CLN6-221ENST00000637494 VILLO15195 856 aa19.41■□□□□ 0.7
CLN6-221ENST00000637494 SNAP91O60641 907 aa19.41■□□□□ 0.7
CLN6-221ENST00000637494 GPD1P21695 349 aa19.41■□□□□ 0.7
CLN6-221ENST00000637494 GSCP56915 257 aaPredicted RBP19.41■□□□□ 0.7
CLN6-221ENST00000637494 NCAPHQ15003 741 aa19.41■□□□□ 0.7
CLN6-221ENST00000637494 C15orf59Q2T9L4 293 aaPredicted RBP19.41■□□□□ 0.7
CLN6-221ENST00000637494 CCDC14Q49A88 953 aa19.41■□□□□ 0.7
CLN6-221ENST00000637494 PPP1R2P3Q6NXS1 205 aa19.41■□□□□ 0.7
CLN6-221ENST00000637494 PHF13Q86YI8 300 aaPredicted RBP19.41■□□□□ 0.7
CLN6-221ENST00000637494 RHBDD1Q8TEB9 315 aa19.41■□□□□ 0.7
CLN6-221ENST00000637494 SERAC1Q96JX3 654 aa19.41■□□□□ 0.7
CLN6-221ENST00000637494 PSMB7Q99436 277 aa19.41■□□□□ 0.7
CLN6-221ENST00000637494 CDC6Q99741 560 aa19.41■□□□□ 0.7
CLN6-221ENST00000637494 ATP13A1Q9HD20 1204 aa19.41■□□□□ 0.7
CLN6-221ENST00000637494 OR12D3Q9UGF7 316 aa19.41■□□□□ 0.7
CLN6-221ENST00000637494 PPM1HQ9ULR3 514 aa19.41■□□□□ 0.7
CLN6-221ENST00000637494 SLCO1B1Q9Y6L6 691 aa19.41■□□□□ 0.7
CLN6-221ENST00000637494 A0A0D9SEW6 157 aa19.4■□□□□ 0.7
CLN6-221ENST00000637494 C2CD4BA6NLJ0 364 aa19.4■□□□□ 0.7
CLN6-221ENST00000637494 PLRG1O43660 514 aaKnown RBP19.4■□□□□ 0.7
CLN6-221ENST00000637494 PRNPP04156 253 aa19.4■□□□□ 0.7
CLN6-221ENST00000637494 CD38P28907 300 aa19.4■□□□□ 0.7
CLN6-221ENST00000637494 ADRA1BP35368 520 aa19.4■□□□□ 0.7
CLN6-221ENST00000637494 DRD3P35462 400 aa19.4■□□□□ 0.7
CLN6-221ENST00000637494 SLC20A2Q08357 652 aa19.4■□□□□ 0.7
CLN6-221ENST00000637494 RWDD4Q6NW29 188 aaKnown RBP19.4■□□□□ 0.7
CLN6-221ENST00000637494 DRC7Q8IY82 874 aa19.4■□□□□ 0.7
CLN6-221ENST00000637494 C3orf20Q8ND61 904 aa19.4■□□□□ 0.7
CLN6-221ENST00000637494 JOSD2Q8TAC2 188 aa19.4■□□□□ 0.7
CLN6-221ENST00000637494 FAM172AQ8WUF8 416 aa19.4■□□□□ 0.7
CLN6-221ENST00000637494 PPP1R16AQ96I34 528 aa19.4■□□□□ 0.7
CLN6-221ENST00000637494 SLC6A18Q96N87 628 aa19.4■□□□□ 0.7
CLN6-221ENST00000637494 PCDHB18PQ96TA0 734 aa19.4■□□□□ 0.7
CLN6-221ENST00000637494 BPIFA3Q9BQP9 254 aa19.4■□□□□ 0.7
CLN6-221ENST00000637494 TMEM63CQ9P1W3 806 aa19.4■□□□□ 0.7
CLN6-221ENST00000637494 PCOLCE2Q9UKZ9 415 aa19.4■□□□□ 0.7
CLN6-221ENST00000637494 NEUROG3Q9Y4Z2 214 aa19.4■□□□□ 0.7
CLN6-221ENST00000637494 KPNA3O00505 521 aaPredicted RBP19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms