RNA–Protein interactions for RNA: ENST00000637329.1

CLN6-219, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,204 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-219ENST00000637329 POLD3Q15054 466 aaPredicted RBP15.69■□□□□ 0.1
CLN6-219ENST00000637329 UAP1Q16222 522 aaPredicted RBP15.69■□□□□ 0.1
CLN6-219ENST00000637329 SLC5A9Q2M3M2 681 aa15.69■□□□□ 0.1
CLN6-219ENST00000637329 TEX44Q53QW1 395 aa15.69■□□□□ 0.1
CLN6-219ENST00000637329 MPP7Q5T2T1 576 aa15.69■□□□□ 0.1
CLN6-219ENST00000637329 ANKRD22Q5VYY1 191 aa15.69■□□□□ 0.1
CLN6-219ENST00000637329 RNF43Q68DV7 783 aa15.69■□□□□ 0.1
CLN6-219ENST00000637329 TMEM184AQ6ZMB5 413 aa15.69■□□□□ 0.1
CLN6-219ENST00000637329 GRASPQ7Z6J2 395 aaPredicted RBP15.69■□□□□ 0.1
CLN6-219ENST00000637329 CCDC25Q86WR0 208 aa15.69■□□□□ 0.1
CLN6-219ENST00000637329 CIR1Q86X95 450 aaPredicted RBP15.69■□□□□ 0.1
CLN6-219ENST00000637329 KLHDC8BQ8IXV7 354 aa15.69■□□□□ 0.1
CLN6-219ENST00000637329 PDIK1LQ8N165 341 aa15.69■□□□□ 0.1
CLN6-219ENST00000637329 WBP2Q969T9 261 aa15.69■□□□□ 0.1
CLN6-219ENST00000637329 TCEAL4Q96EI5 215 aa15.69■□□□□ 0.1
CLN6-219ENST00000637329 MYEOVQ96EZ4 313 aa15.69■□□□□ 0.1
CLN6-219ENST00000637329 HMCESQ96FZ2 354 aa15.69■□□□□ 0.1
CLN6-219ENST00000637329 TEKT5Q96M29 485 aa15.69■□□□□ 0.1
CLN6-219ENST00000637329 RBM15Q96T37 977 aaKnown RBP eCLIP15.69■□□□□ 0.12e-7■■■■□ 25.8
CLN6-219ENST00000637329 RUFY1Q96T51 708 aa15.69■□□□□ 0.1
CLN6-219ENST00000637329 NSUN3Q9H649 340 aaKnown RBP15.69■□□□□ 0.1
CLN6-219ENST00000637329 PIDD1Q9HB75 910 aa15.69■□□□□ 0.1
CLN6-219ENST00000637329 XAB2Q9HCS7 855 aaKnown RBP15.69■□□□□ 0.1
CLN6-219ENST00000637329 HAUS2Q9NVX0 235 aa15.69■□□□□ 0.1
CLN6-219ENST00000637329 GOLGA6AQ9NYA3 693 aa15.69■□□□□ 0.1
CLN6-219ENST00000637329 IPO11Q9UI26 975 aaKnown RBP15.69■□□□□ 0.1
CLN6-219ENST00000637329 TBC1D30Q9Y2I9 924 aa15.69■□□□□ 0.1
CLN6-219ENST00000637329 NUP210Q8TEM1 1887 aaPredicted RBP15.69■□□□□ 0.1
CLN6-219ENST00000637329 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.68■□□□□ 0.1
CLN6-219ENST00000637329 E7EVH7 732 aa15.68■□□□□ 0.1
CLN6-219ENST00000637329 NRG2O14511 850 aaPredicted RBP15.68■□□□□ 0.1
CLN6-219ENST00000637329 GJA1P17302 382 aa15.68■□□□□ 0.1
CLN6-219ENST00000637329 IGFBP4P22692 258 aa15.68■□□□□ 0.1
CLN6-219ENST00000637329 EIF3BP55884 814 aaKnown RBP15.68■□□□□ 0.1
CLN6-219ENST00000637329 ZXDBP98169 803 aa15.68■□□□□ 0.1
CLN6-219ENST00000637329 GNA12Q03113 381 aa15.68■□□□□ 0.1
CLN6-219ENST00000637329 ZBTB17Q13105 803 aa15.68■□□□□ 0.1
CLN6-219ENST00000637329 ZNF177Q13360 481 aaPredicted RBP15.68■□□□□ 0.1
CLN6-219ENST00000637329 HNRNPDQ14103 355 aaKnown RBP15.68■□□□□ 0.1
CLN6-219ENST00000637329 CCDC85BQ15834 202 aaPredicted RBP15.68■□□□□ 0.1
CLN6-219ENST00000637329 TMEM31Q5JXX7 168 aa15.68■□□□□ 0.1
CLN6-219ENST00000637329 DENND2CQ68D51 928 aa15.68■□□□□ 0.1
CLN6-219ENST00000637329 IQCKQ8N0W5 287 aa15.68■□□□□ 0.1
CLN6-219ENST00000637329 NETO2Q8NC67 525 aa15.68■□□□□ 0.1
CLN6-219ENST00000637329 ZSCAN18Q8TBC5 510 aaPredicted RBP15.68■□□□□ 0.1
CLN6-219ENST00000637329 SH3RF2Q8TEC5 729 aa15.68■□□□□ 0.1
CLN6-219ENST00000637329 LRRN4Q8WUT4 740 aa15.68■□□□□ 0.1
CLN6-219ENST00000637329 DEPDC1BQ8WUY9 529 aa15.68■□□□□ 0.1
CLN6-219ENST00000637329 NSMCE1Q8WV22 266 aa15.68■□□□□ 0.1
CLN6-219ENST00000637329 UBLCP1Q8WVY7 318 aaPredicted RBP15.68■□□□□ 0.1
CLN6-219ENST00000637329 CDC42EP4Q9H3Q1 356 aaKnown RBP15.68■□□□□ 0.1
CLN6-219ENST00000637329 SP110Q9HB58 689 aa15.68■□□□□ 0.1
CLN6-219ENST00000637329 ETNK1Q9HBU6 452 aa15.68■□□□□ 0.1
CLN6-219ENST00000637329 MED4Q9NPJ6 270 aa15.68■□□□□ 0.1
CLN6-219ENST00000637329 TDP1Q9NUW8 608 aa15.68■□□□□ 0.1
CLN6-219ENST00000637329 RSPH14Q9UHP6 348 aa15.68■□□□□ 0.1
CLN6-219ENST00000637329 MRPS23Q9Y3D9 190 aaKnown RBP15.68■□□□□ 0.1
CLN6-219ENST00000637329 BDP1A6H8Y1 2624 aa15.67■□□□□ 0.1
CLN6-219ENST00000637329 PSMD3O43242 534 aa15.67■□□□□ 0.1
CLN6-219ENST00000637329 RIPK2O43353 540 aa15.67■□□□□ 0.1
CLN6-219ENST00000637329 CACNG3O60359 315 aa15.67■□□□□ 0.1
CLN6-219ENST00000637329 PRAMEF11O60813 436 aa15.67■□□□□ 0.1
CLN6-219ENST00000637329 APRTP07741 180 aa15.67■□□□□ 0.1
CLN6-219ENST00000637329 RHOCP08134 193 aa15.67■□□□□ 0.1
CLN6-219ENST00000637329 ABHD2P08910 425 aa15.67■□□□□ 0.1
CLN6-219ENST00000637329 MLNP12872 115 aa15.67■□□□□ 0.1
CLN6-219ENST00000637329 TSHRP16473 764 aa15.67■□□□□ 0.1
CLN6-219ENST00000637329 CEBPBP17676 345 aa15.67■□□□□ 0.1
CLN6-219ENST00000637329 PSMB4P28070 264 aa15.67■□□□□ 0.1
CLN6-219ENST00000637329 RENBPP51606 427 aa15.67■□□□□ 0.1
CLN6-219ENST00000637329 RPS24P62847 133 aaKnown RBP15.67■□□□□ 0.1
CLN6-219ENST00000637329 ZNF77Q15935 545 aa15.67■□□□□ 0.1
CLN6-219ENST00000637329 MPPE1Q53F39 396 aa15.67■□□□□ 0.1
CLN6-219ENST00000637329 DNAJC21Q5F1R6 531 aaKnown RBP15.67■□□□□ 0.1
CLN6-219ENST00000637329 TMCO4Q5TGY1 634 aa15.67■□□□□ 0.1
CLN6-219ENST00000637329 ARHGAP36Q6ZRI8 547 aa15.67■□□□□ 0.1
CLN6-219ENST00000637329 PID1Q7Z2X4 250 aa15.67■□□□□ 0.1
CLN6-219ENST00000637329 EFHBQ8N7U6 833 aa15.67■□□□□ 0.1
CLN6-219ENST00000637329 VN1R2Q8NFZ6 395 aa15.67■□□□□ 0.1
CLN6-219ENST00000637329 ARHGEF2Q92974 986 aaKnown RBP15.67■□□□□ 0.1
CLN6-219ENST00000637329 OTUB2Q96DC9 234 aa15.67■□□□□ 0.1
CLN6-219ENST00000637329 LRRC39Q96DD0 335 aa15.67■□□□□ 0.1
CLN6-219ENST00000637329 SERPINB12Q96P63 405 aa15.67■□□□□ 0.1
CLN6-219ENST00000637329 LRFN3Q9BTN0 628 aa15.67■□□□□ 0.1
CLN6-219ENST00000637329 EPB41L4BQ9H329 900 aa15.67■□□□□ 0.1
CLN6-219ENST00000637329 FAM53CQ9NYF3 392 aa15.67■□□□□ 0.1
CLN6-219ENST00000637329 LMCD1Q9NZU5 365 aa15.67■□□□□ 0.1
CLN6-219ENST00000637329 CHD5Q8TDI0 1954 aa15.67■□□□□ 0.1
CLN6-219ENST00000637329 NEBLO76041 1014 aa15.66■□□□□ 0.1
CLN6-219ENST00000637329 SUN1O94901 812 aa15.66■□□□□ 0.1
CLN6-219ENST00000637329 LUC7L3O95232 432 aaKnown RBP15.66■□□□□ 0.1
CLN6-219ENST00000637329 TTC4O95801 387 aa15.66■□□□□ 0.1
CLN6-219ENST00000637329 PEX11BO96011 259 aa15.66■□□□□ 0.1
CLN6-219ENST00000637329 HOXD9P28356 352 aaPredicted RBP15.66■□□□□ 0.1
CLN6-219ENST00000637329 MAGEA3P43357 314 aa15.66■□□□□ 0.1
CLN6-219ENST00000637329 MAGEA4P43358 317 aa15.66■□□□□ 0.1
CLN6-219ENST00000637329 SGSHP51688 502 aa15.66■□□□□ 0.1
CLN6-219ENST00000637329 OXCT1P55809 520 aa15.66■□□□□ 0.1
CLN6-219ENST00000637329 PRPSAP1Q14558 356 aa15.66■□□□□ 0.1
CLN6-219ENST00000637329 FAXCQ5TGI0 409 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms