RNA–Protein interactions for RNA: ENST00000636876.1

CLN6-216, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-216ENST00000636876 CTSOP43234 321 aaPredicted RBP16.37■□□□□ 0.21
CLN6-216ENST00000636876 RPS9P46781 194 aaKnown RBP16.37■□□□□ 0.21
CLN6-216ENST00000636876 CLCN5P51795 746 aa16.37■□□□□ 0.21
CLN6-216ENST00000636876 GNG11P61952 73 aa16.37■□□□□ 0.21
CLN6-216ENST00000636876 MRPS21P82921 87 aaKnown RBP16.37■□□□□ 0.21
CLN6-216ENST00000636876 ECT2LQ008S8 904 aa16.37■□□□□ 0.21
CLN6-216ENST00000636876 SULT2A1Q06520 285 aa16.37■□□□□ 0.21
CLN6-216ENST00000636876 ZNF211Q13398 564 aaPredicted RBP16.37■□□□□ 0.21
CLN6-216ENST00000636876 SERINC3Q13530 473 aa16.37■□□□□ 0.21
CLN6-216ENST00000636876 E2F5Q15329 346 aa16.37■□□□□ 0.21
CLN6-216ENST00000636876 LLGL1Q15334 1064 aa16.37■□□□□ 0.21
CLN6-216ENST00000636876 EGFLAMQ63HQ2 1017 aa16.37■□□□□ 0.21
CLN6-216ENST00000636876 KAZNQ674X7 775 aa16.37■□□□□ 0.21
CLN6-216ENST00000636876 IL31Q6EBC2 164 aa16.37■□□□□ 0.21
CLN6-216ENST00000636876 AADACL2Q6P093 401 aa16.37■□□□□ 0.21
CLN6-216ENST00000636876 PLD5Q8N7P1 536 aa16.37■□□□□ 0.21
CLN6-216ENST00000636876 ZNF513Q8N8E2 541 aaPredicted RBP16.37■□□□□ 0.21
CLN6-216ENST00000636876 NETO2Q8NC67 525 aa16.37■□□□□ 0.21
CLN6-216ENST00000636876 KCNV2Q8TDN2 545 aa16.37■□□□□ 0.21
CLN6-216ENST00000636876 CYB5D2Q8WUJ1 264 aa16.37■□□□□ 0.21
CLN6-216ENST00000636876 PBXIP1Q96AQ6 731 aa16.37■□□□□ 0.21
CLN6-216ENST00000636876 OSBPL8Q9BZF1 889 aa16.37■□□□□ 0.21
CLN6-216ENST00000636876 SLC39A8Q9C0K1 460 aa16.37■□□□□ 0.21
CLN6-216ENST00000636876 THAP10Q9P2Z0 257 aaPredicted RBP16.37■□□□□ 0.21
CLN6-216ENST00000636876 EFR3BQ9Y2G0 817 aa16.37■□□□□ 0.21
CLN6-216ENST00000636876 CBX4O00257 560 aa16.36■□□□□ 0.21
CLN6-216ENST00000636876 ENC1O14682 589 aa16.36■□□□□ 0.21
CLN6-216ENST00000636876 NPC1O15118 1278 aa16.36■□□□□ 0.21
CLN6-216ENST00000636876 KDELR3O43731 214 aa16.36■□□□□ 0.21
CLN6-216ENST00000636876 CST8O60676 142 aa16.36■□□□□ 0.21
CLN6-216ENST00000636876 DCNP07585 359 aaKnown RBP16.36■□□□□ 0.21
CLN6-216ENST00000636876 GLDCP23378 1020 aa16.36■□□□□ 0.21
CLN6-216ENST00000636876 TIE1P35590 1138 aa16.36■□□□□ 0.21
CLN6-216ENST00000636876 PAPOLAP51003 745 aaKnown RBP16.36■□□□□ 0.21
CLN6-216ENST00000636876 DYNLT1P63172 113 aa16.36■□□□□ 0.21
CLN6-216ENST00000636876 GBE1Q04446 702 aa16.36■□□□□ 0.21
CLN6-216ENST00000636876 PTPRNQ16849 979 aa16.36■□□□□ 0.21
CLN6-216ENST00000636876 C2orf27AQ580R0 203 aa16.36■□□□□ 0.21
CLN6-216ENST00000636876 Q6ZS52 159 aa16.36■□□□□ 0.21
CLN6-216ENST00000636876 BBS12Q6ZW61 710 aa16.36■□□□□ 0.21
CLN6-216ENST00000636876 TP53INP2Q8IXH6 220 aa16.36■□□□□ 0.21
CLN6-216ENST00000636876 ACDQ96AP0 544 aa16.36■□□□□ 0.21
CLN6-216ENST00000636876 MRGPRX3Q96LB0 322 aa16.36■□□□□ 0.21
CLN6-216ENST00000636876 HERPUD2Q9BSE4 406 aa16.36■□□□□ 0.21
CLN6-216ENST00000636876 HEMGNQ9BXL5 484 aa16.36■□□□□ 0.21
CLN6-216ENST00000636876 CARD9Q9H257 536 aa16.36■□□□□ 0.21
CLN6-216ENST00000636876 CHRDQ9H2X0 955 aa16.36■□□□□ 0.21
CLN6-216ENST00000636876 HPCAL4Q9UM19 191 aa16.36■□□□□ 0.21
CLN6-216ENST00000636876 PLA2G4CQ9UP65 541 aa16.36■□□□□ 0.21
CLN6-216ENST00000636876 ERVW-1Q9UQF0 538 aa16.36■□□□□ 0.21
CLN6-216ENST00000636876 WDFY4Q6ZS81 3184 aa16.36■□□□□ 0.21
CLN6-216ENST00000636876 DFFAO00273 331 aa16.35■□□□□ 0.21
CLN6-216ENST00000636876 KCNK3O14649 394 aa16.35■□□□□ 0.21
CLN6-216ENST00000636876 PI15O43692 258 aa16.35■□□□□ 0.21
CLN6-216ENST00000636876 SRPRAP08240 638 aaKnown RBP16.35■□□□□ 0.21
CLN6-216ENST00000636876 MAGEA9P43362 315 aa16.35■□□□□ 0.21
CLN6-216ENST00000636876 VASPP50552 380 aaPredicted RBP16.35■□□□□ 0.21
CLN6-216ENST00000636876 ADCY2Q08462 1091 aa16.35■□□□□ 0.21
CLN6-216ENST00000636876 GALNT2Q10471 571 aa16.35■□□□□ 0.21
CLN6-216ENST00000636876 ZNF234Q14588 700 aa16.35■□□□□ 0.21
CLN6-216ENST00000636876 HSF5Q4G112 596 aaPredicted RBP16.35■□□□□ 0.21
CLN6-216ENST00000636876 FNDC3BQ53EP0 1204 aaKnown RBP16.35■□□□□ 0.21
CLN6-216ENST00000636876 SEL1L2Q5TEA6 688 aa16.35■□□□□ 0.21
CLN6-216ENST00000636876 PKN3Q6P5Z2 889 aa16.35■□□□□ 0.21
CLN6-216ENST00000636876 TRMT11Q7Z4G4 463 aaKnown RBP16.35■□□□□ 0.21
CLN6-216ENST00000636876 ZNF354CQ86Y25 554 aa16.35■□□□□ 0.21
CLN6-216ENST00000636876 FBXL6Q8N531 539 aa16.35■□□□□ 0.21
CLN6-216ENST00000636876 IL17RCQ8NAC3 791 aa16.35■□□□□ 0.21
CLN6-216ENST00000636876 KDM1BQ8NB78 822 aa16.35■□□□□ 0.21
CLN6-216ENST00000636876 RPLP0P6Q8NHW5 317 aa16.35■□□□□ 0.21
CLN6-216ENST00000636876 RPL10LQ96L21 214 aaKnown RBP16.35■□□□□ 0.21
CLN6-216ENST00000636876 WDR24Q96S15 920 aa16.35■□□□□ 0.21
CLN6-216ENST00000636876 ACOX2Q99424 681 aa16.35■□□□□ 0.21
CLN6-216ENST00000636876 ZDHHC4Q9NPG8 344 aa16.35■□□□□ 0.21
CLN6-216ENST00000636876 DTLQ9NZJ0 730 aa16.35■□□□□ 0.21
CLN6-216ENST00000636876 DLGAP2Q9P1A6 1054 aa16.35■□□□□ 0.21
CLN6-216ENST00000636876 SLC25A13Q9UJS0 675 aa16.35■□□□□ 0.21
CLN6-216ENST00000636876 MUC22E2RYF6 1773 aaPredicted RBP16.34■□□□□ 0.21
CLN6-216ENST00000636876 NYNRINQ9P2P1 1898 aaKnown RBP16.34■□□□□ 0.21
CLN6-216ENST00000636876 CXorf51AA0A1B0GTR3 108 aa16.34■□□□□ 0.21
CLN6-216ENST00000636876 ZSCAN5CA6NGD5 496 aaPredicted RBP16.34■□□□□ 0.21
CLN6-216ENST00000636876 CHURC1-FNTBB4DL54 471 aa16.34■□□□□ 0.21
CLN6-216ENST00000636876 PRAMEF11O60813 436 aa16.34■□□□□ 0.21
CLN6-216ENST00000636876 KLF8O95600 359 aaPredicted RBP16.34■□□□□ 0.21
CLN6-216ENST00000636876 ATP1A1P05023 1023 aaKnown RBP16.34■□□□□ 0.21
CLN6-216ENST00000636876 TGM2P21980 687 aa16.34■□□□□ 0.21
CLN6-216ENST00000636876 NTSR1P30989 418 aa16.34■□□□□ 0.21
CLN6-216ENST00000636876 STK19P49842 368 aaPredicted RBP16.34■□□□□ 0.21
CLN6-216ENST00000636876 ST8SIA6P61647 398 aa16.34■□□□□ 0.21
CLN6-216ENST00000636876 ARF5P84085 180 aa16.34■□□□□ 0.21
CLN6-216ENST00000636876 SLC20A2Q08357 652 aa16.34■□□□□ 0.21
CLN6-216ENST00000636876 SLC10A2Q12908 348 aaPredicted RBP16.34■□□□□ 0.21
CLN6-216ENST00000636876 ENPP2Q13822 863 aa16.34■□□□□ 0.21
CLN6-216ENST00000636876 GAS6Q14393 721 aa16.34■□□□□ 0.21
CLN6-216ENST00000636876 RETSATQ6NUM9 610 aa16.34■□□□□ 0.21
CLN6-216ENST00000636876 NPNTQ6UXI9 565 aa16.34■□□□□ 0.21
CLN6-216ENST00000636876 LINGO4Q6UY18 593 aa16.34■□□□□ 0.21
CLN6-216ENST00000636876 LRRC49Q8IUZ0 686 aa16.34■□□□□ 0.21
CLN6-216ENST00000636876 CHPFQ8IZ52 775 aa16.34■□□□□ 0.21
CLN6-216ENST00000636876 ATPAF2Q8N5M1 289 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms