RNA–Protein interactions for RNA: ENST00000636843.1

CTSD-208, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,512 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-208ENST00000636843 GJB7Q6PEY0 223 aa13.03□□□□□ -0.32
CTSD-208ENST00000636843 PPM1KQ8N3J5 372 aa13.03□□□□□ -0.32
CTSD-208ENST00000636843 HJURPQ8NCD3 748 aaPredicted RBP13.03□□□□□ -0.32
CTSD-208ENST00000636843 WFDC5Q8TCV5 224 aa13.03□□□□□ -0.32
CTSD-208ENST00000636843 TTC17Q96AE7 1141 aa13.03□□□□□ -0.32
CTSD-208ENST00000636843 TM9SF3Q9HD45 589 aa13.03□□□□□ -0.32
CTSD-208ENST00000636843 RAB21Q9UL25 225 aa13.03□□□□□ -0.32
CTSD-208ENST00000636843 NCKAP1Q9Y2A7 1128 aa13.03□□□□□ -0.32
CTSD-208ENST00000636843 ANKRD6Q9Y2G4 727 aa13.03□□□□□ -0.32
CTSD-208ENST00000636843 NUMA1Q14980 2115 aa13.02□□□□□ -0.32
CTSD-208ENST00000636843 A0A0A6YYK5 440 aaPredicted RBP13.02□□□□□ -0.33
CTSD-208ENST00000636843 MCM3P25205 808 aa13.02□□□□□ -0.33
CTSD-208ENST00000636843 SLC6A4P31645 630 aa13.02□□□□□ -0.33
CTSD-208ENST00000636843 ST8SIA6P61647 398 aa13.02□□□□□ -0.33
CTSD-208ENST00000636843 USP30Q70CQ3 517 aa13.02□□□□□ -0.33
CTSD-208ENST00000636843 TMPRSS7Q7RTY8 843 aa13.02□□□□□ -0.33
CTSD-208ENST00000636843 ZNF572Q7Z3I7 529 aaPredicted RBP13.02□□□□□ -0.33
CTSD-208ENST00000636843 MFN1Q8IWA4 741 aa13.02□□□□□ -0.33
CTSD-208ENST00000636843 KDM1BQ8NB78 822 aa13.02□□□□□ -0.33
CTSD-208ENST00000636843 IGSF8Q969P0 613 aa13.02□□□□□ -0.33
CTSD-208ENST00000636843 BIRC7Q96CA5 298 aa13.02□□□□□ -0.33
CTSD-208ENST00000636843 LMLNQ96KR4 655 aa13.02□□□□□ -0.33
CTSD-208ENST00000636843 RSPH9Q9H1X1 276 aaPredicted RBP13.02□□□□□ -0.33
CTSD-208ENST00000636843 CCDC86Q9H6F5 360 aaKnown RBP13.02□□□□□ -0.33
CTSD-208ENST00000636843 STIM2Q9P246 746 aa13.02□□□□□ -0.33
CTSD-208ENST00000636843 RNF14Q9UBS8 474 aa13.02□□□□□ -0.33
CTSD-208ENST00000636843 SALL4Q9UJQ4 1053 aa13.02□□□□□ -0.33
CTSD-208ENST00000636843 SNX11Q9Y5W9 270 aa13.02□□□□□ -0.33
CTSD-208ENST00000636843 ANKRD11Q6UB99 2663 aaPredicted RBP13.01□□□□□ -0.33
CTSD-208ENST00000636843 GOLGA6L7A0A1B0GV03 622 aa13.01□□□□□ -0.33
CTSD-208ENST00000636843 PIK3R2O00459 728 aa13.01□□□□□ -0.33
CTSD-208ENST00000636843 SART1O43290 800 aaKnown RBP13.01□□□□□ -0.33
CTSD-208ENST00000636843 BUB1O43683 1085 aa13.01□□□□□ -0.33
CTSD-208ENST00000636843 PCDHGA12O60330 932 aa13.01□□□□□ -0.33
CTSD-208ENST00000636843 DFNA5O60443 496 aa13.01□□□□□ -0.33
CTSD-208ENST00000636843 RNASEH1O60930 286 aaKnown RBP13.01□□□□□ -0.33
CTSD-208ENST00000636843 SRGAP2O75044 1071 aa13.01□□□□□ -0.33
CTSD-208ENST00000636843 ERLIN1O75477 346 aa13.01□□□□□ -0.33
CTSD-208ENST00000636843 DKK1O94907 266 aa13.01□□□□□ -0.33
CTSD-208ENST00000636843 FSBPO95073 299 aa13.01□□□□□ -0.33
CTSD-208ENST00000636843 H2AFZP0C0S5 128 aa13.01□□□□□ -0.33
CTSD-208ENST00000636843 BRD2P25440 801 aaKnown RBP13.01□□□□□ -0.33
CTSD-208ENST00000636843 GRK6P43250 576 aa13.01□□□□□ -0.33
CTSD-208ENST00000636843 H2AFVQ71UI9 128 aa13.01□□□□□ -0.33
CTSD-208ENST00000636843 CCDC117Q8IWD4 279 aaPredicted RBP13.01□□□□□ -0.33
CTSD-208ENST00000636843 SLC30A5Q8TAD4 765 aa13.01□□□□□ -0.33
CTSD-208ENST00000636843 HNRNPLLQ8WVV9 542 aaKnown RBP13.01□□□□□ -0.33
CTSD-208ENST00000636843 FAM81BQ96LP2 452 aa13.01□□□□□ -0.33
CTSD-208ENST00000636843 SERPINB11Q96P15 392 aa13.01□□□□□ -0.33
CTSD-208ENST00000636843 OSBPL9Q96SU4 736 aa13.01□□□□□ -0.33
CTSD-208ENST00000636843 ZSWIM1Q9BR11 485 aa13.01□□□□□ -0.33
CTSD-208ENST00000636843 PABPC3Q9H361 631 aaKnown RBP13.01□□□□□ -0.33
CTSD-208ENST00000636843 ANKZF1Q9H8Y5 726 aa13.01□□□□□ -0.33
CTSD-208ENST00000636843 ARFGAP3Q9NP61 516 aa13.01□□□□□ -0.33
CTSD-208ENST00000636843 TOR4AQ9NXH8 423 aa13.01□□□□□ -0.33
CTSD-208ENST00000636843 TLR6Q9Y2C9 796 aa13.01□□□□□ -0.33
CTSD-208ENST00000636843 SLCO1B1Q9Y6L6 691 aa13.01□□□□□ -0.33
CTSD-208ENST00000636843 DDX3XO00571 662 aaKnown RBP eCLIP13□□□□□ -0.333e-21■■■■□ 22.5
CTSD-208ENST00000636843 TNFSF14O43557 240 aa13□□□□□ -0.33
CTSD-208ENST00000636843 PALMO75781 387 aa13□□□□□ -0.33
CTSD-208ENST00000636843 ZRANB2O95218 330 aaKnown RBP eCLIP13□□□□□ -0.33
CTSD-208ENST00000636843 ATXN1LP0C7T5 689 aaKnown RBP13□□□□□ -0.33
CTSD-208ENST00000636843 CSKP41240 450 aa13□□□□□ -0.33
CTSD-208ENST00000636843 CCT8P50990 548 aa13□□□□□ -0.33
CTSD-208ENST00000636843 RACK1P63244 317 aaKnown RBP13□□□□□ -0.33
CTSD-208ENST00000636843 GCNT1Q02742 428 aa13□□□□□ -0.33
CTSD-208ENST00000636843 HNRNPA1L2Q32P51 320 aaKnown RBP13□□□□□ -0.33
CTSD-208ENST00000636843 KIAA0895LQ68EN5 471 aa13□□□□□ -0.33
CTSD-208ENST00000636843 NADSYN1Q6IA69 706 aa13□□□□□ -0.33
CTSD-208ENST00000636843 ADAT2Q7Z6V5 191 aaKnown RBP13□□□□□ -0.33
CTSD-208ENST00000636843 GALNT15Q8N3T1 639 aa13□□□□□ -0.33
CTSD-208ENST00000636843 DQX1Q8TE96 717 aaKnown RBP13□□□□□ -0.33
CTSD-208ENST00000636843 GANCQ8TET4 914 aa13□□□□□ -0.33
CTSD-208ENST00000636843 CLEC4CQ8WTT0 213 aa13□□□□□ -0.33
CTSD-208ENST00000636843 MYO19Q96H55 970 aa13□□□□□ -0.33
CTSD-208ENST00000636843 FCRL2Q96LA5 508 aaPredicted RBP13□□□□□ -0.33
CTSD-208ENST00000636843 PRICKLE1Q96MT3 831 aaPredicted RBP13□□□□□ -0.33
CTSD-208ENST00000636843 SYT11Q9BT88 431 aa13□□□□□ -0.33
CTSD-208ENST00000636843 TRIM62Q9BVG3 475 aa13□□□□□ -0.33
CTSD-208ENST00000636843 MIS12Q9H081 205 aa13□□□□□ -0.33
CTSD-208ENST00000636843 UBE2TQ9NPD8 197 aaPredicted RBP13□□□□□ -0.33
CTSD-208ENST00000636843 ZNF446Q9NWS9 450 aa13□□□□□ -0.33
CTSD-208ENST00000636843 FBXL12Q9NXK8 326 aa13□□□□□ -0.33
CTSD-208ENST00000636843 BTBD3Q9Y2F9 522 aa13□□□□□ -0.33
CTSD-208ENST00000636843 DSPP15924 2871 aaKnown RBP13□□□□□ -0.33
CTSD-208ENST00000636843 TARSL2A2RTX5 802 aaKnown RBP12.99□□□□□ -0.33
CTSD-208ENST00000636843 PAPSS1O43252 624 aaPredicted RBP12.99□□□□□ -0.33
CTSD-208ENST00000636843 FYNP06241 537 aa12.99□□□□□ -0.33
CTSD-208ENST00000636843 IGHV4-34P06331 123 aa12.99□□□□□ -0.33
CTSD-208ENST00000636843 SRPRAP08240 638 aaKnown RBP12.99□□□□□ -0.33
CTSD-208ENST00000636843 TNFAIP3P21580 790 aa12.99□□□□□ -0.33
CTSD-208ENST00000636843 PAFAH1B1P43034 410 aa12.99□□□□□ -0.33
CTSD-208ENST00000636843 CTSKP43235 329 aa12.99□□□□□ -0.33
CTSD-208ENST00000636843 ACADSBP45954 432 aa12.99□□□□□ -0.33
CTSD-208ENST00000636843 RPL34P49207 117 aaKnown RBP12.99□□□□□ -0.33
CTSD-208ENST00000636843 C21orf59P57076 290 aa12.99□□□□□ -0.33
CTSD-208ENST00000636843 RPS24P62847 133 aaKnown RBP12.99□□□□□ -0.33
CTSD-208ENST00000636843 CDH18Q13634 790 aa12.99□□□□□ -0.33
CTSD-208ENST00000636843 ARHGAP44Q17R89 818 aa12.99□□□□□ -0.33
CTSD-208ENST00000636843 INAVAQ3KP66 663 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms