RNA–Protein interactions for RNA: ENST00000635853.1

SPTAN1-228, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 5

Gene SPTAN1, Length 5,870 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-228ENST00000635853 COX10Q12887 443 aa10□□□□□ -0.81
SPTAN1-228ENST00000635853 GATAD2AQ86YP4 633 aa10□□□□□ -0.81
SPTAN1-228ENST00000635853 RORBQ92753 470 aa10□□□□□ -0.81
SPTAN1-228ENST00000635853 ADAM30Q9UKF2 790 aa10□□□□□ -0.81
SPTAN1-228ENST00000635853 SYNPO2Q9UMS6 1093 aa10□□□□□ -0.81
SPTAN1-228ENST00000635853 SCAF8Q9UPN6 1271 aaKnown RBP10□□□□□ -0.81
SPTAN1-228ENST00000635853 PCDHB9Q9Y5E1 797 aa10□□□□□ -0.81
SPTAN1-228ENST00000635853 CCDC85CA6NKD9 419 aa10□□□□□ -0.81
SPTAN1-228ENST00000635853 H3BSA7 217 aa10□□□□□ -0.81
SPTAN1-228ENST00000635853 CBX4O00257 560 aa10□□□□□ -0.81
SPTAN1-228ENST00000635853 HS6ST1O60243 411 aa10□□□□□ -0.81
SPTAN1-228ENST00000635853 SNAP91O60641 907 aa10□□□□□ -0.81
SPTAN1-228ENST00000635853 NADKO95544 446 aaPredicted RBP10□□□□□ -0.81
SPTAN1-228ENST00000635853 HLA-DRAP01903 254 aa10□□□□□ -0.81
SPTAN1-228ENST00000635853 TFE3P19532 575 aaPredicted RBP10□□□□□ -0.81
SPTAN1-228ENST00000635853 RASA1P20936 1047 aa10□□□□□ -0.81
SPTAN1-228ENST00000635853 DSG3P32926 999 aa10□□□□□ -0.81
SPTAN1-228ENST00000635853 NAMPTP43490 491 aa10□□□□□ -0.81
SPTAN1-228ENST00000635853 NPY2RP49146 381 aa10□□□□□ -0.81
SPTAN1-228ENST00000635853 FXR2P51116 673 aaKnown RBP eCLIP10□□□□□ -0.811e-7■■■■□ 19.7
SPTAN1-228ENST00000635853 ACTR3P61158 418 aa10□□□□□ -0.81
SPTAN1-228ENST00000635853 MOGQ16653 247 aa10□□□□□ -0.81
SPTAN1-228ENST00000635853 RABL6Q3YEC7 729 aaPredicted RBP10□□□□□ -0.81
SPTAN1-228ENST00000635853 MROH9Q5TGP6 573 aa10□□□□□ -0.81
SPTAN1-228ENST00000635853 DENND5BQ6ZUT9 1274 aa10□□□□□ -0.81
SPTAN1-228ENST00000635853 UNC45BQ8IWX7 931 aa10□□□□□ -0.81
SPTAN1-228ENST00000635853 CGRRF1Q99675 332 aa10□□□□□ -0.81
SPTAN1-228ENST00000635853 HNRNPABQ99729 332 aaKnown RBP10□□□□□ -0.81
SPTAN1-228ENST00000635853 C1QTNF7Q9BXJ2 289 aa10□□□□□ -0.81
SPTAN1-228ENST00000635853 ADGRE3Q9BY15 652 aa10□□□□□ -0.81
SPTAN1-228ENST00000635853 DNAJC18Q9H819 358 aa10□□□□□ -0.81
SPTAN1-228ENST00000635853 AVENQ9NQS1 362 aaPredicted RBP10□□□□□ -0.81
SPTAN1-228ENST00000635853 CDH22Q9UJ99 828 aa10□□□□□ -0.81
SPTAN1-228ENST00000635853 CCRL2O00421 344 aa10□□□□□ -0.81
SPTAN1-228ENST00000635853 UGT1A9O60656 530 aa10□□□□□ -0.81
SPTAN1-228ENST00000635853 B3GAT3O94766 335 aa10□□□□□ -0.81
SPTAN1-228ENST00000635853 CRTAMO95727 393 aa10□□□□□ -0.81
SPTAN1-228ENST00000635853 UGT1A6P19224 532 aa10□□□□□ -0.81
SPTAN1-228ENST00000635853 UGT1A1P22309 533 aa10□□□□□ -0.81
SPTAN1-228ENST00000635853 UGT1A4P22310 534 aa10□□□□□ -0.81
SPTAN1-228ENST00000635853 UGT1A3P35503 534 aa10□□□□□ -0.81
SPTAN1-228ENST00000635853 UGT1A5P35504 534 aa10□□□□□ -0.81
SPTAN1-228ENST00000635853 CCT3P49368 545 aaKnown RBP10□□□□□ -0.81
SPTAN1-228ENST00000635853 CCR4P51679 360 aa10□□□□□ -0.81
SPTAN1-228ENST00000635853 KLHL35Q6PF15 583 aa10□□□□□ -0.81
SPTAN1-228ENST00000635853 C4orf22Q6V702 233 aa10□□□□□ -0.81
SPTAN1-228ENST00000635853 ASRGL1Q7L266 308 aa10□□□□□ -0.81
SPTAN1-228ENST00000635853 TTC7BQ86TV6 843 aa10□□□□□ -0.81
SPTAN1-228ENST00000635853 CACUL1Q86Y37 369 aa10□□□□□ -0.81
SPTAN1-228ENST00000635853 CDH19Q9H159 772 aa10□□□□□ -0.81
SPTAN1-228ENST00000635853 MIR1-1HGQ9H1L0 117 aa10□□□□□ -0.81
SPTAN1-228ENST00000635853 UGT1A7Q9HAW7 530 aa10□□□□□ -0.81
SPTAN1-228ENST00000635853 UGT1A10Q9HAW8 530 aa10□□□□□ -0.81
SPTAN1-228ENST00000635853 UGT1A8Q9HAW9 530 aa10□□□□□ -0.81
SPTAN1-228ENST00000635853 RRAGCQ9HB90 399 aa10□□□□□ -0.81
SPTAN1-228ENST00000635853 SPG21Q9NZD8 308 aa10□□□□□ -0.81
SPTAN1-228ENST00000635853 GIT1Q9Y2X7 761 aa10□□□□□ -0.81
SPTAN1-228ENST00000635853 SAGE2PA6NJ88 616 aa10□□□□□ -0.81
SPTAN1-228ENST00000635853 FGRP09769 529 aa10□□□□□ -0.81
SPTAN1-228ENST00000635853 DPEP1P16444 411 aa10□□□□□ -0.81
SPTAN1-228ENST00000635853 ACAD10Q6JQN1 1059 aa10□□□□□ -0.81
SPTAN1-228ENST00000635853 CYP20A1Q6UW02 462 aa10□□□□□ -0.81
SPTAN1-228ENST00000635853 AGMOQ6ZNB7 445 aa10□□□□□ -0.81
SPTAN1-228ENST00000635853 DSG4Q86SJ6 1040 aa10□□□□□ -0.81
SPTAN1-228ENST00000635853 ADGRF2Q8IZF7 708 aa10□□□□□ -0.81
SPTAN1-228ENST00000635853 LRRC20Q8TCA0 184 aa10□□□□□ -0.81
SPTAN1-228ENST00000635853 RTKNQ9BST9 563 aa10□□□□□ -0.81
SPTAN1-228ENST00000635853 IRF2BPLQ9H1B7 796 aa10□□□□□ -0.81
SPTAN1-228ENST00000635853 ATXN3LQ9H3M9 355 aa10□□□□□ -0.81
SPTAN1-228ENST00000635853 SSU72Q9NP77 194 aaKnown RBP10□□□□□ -0.81
SPTAN1-228ENST00000635853 PDGFCQ9NRA1 345 aa10□□□□□ -0.81
SPTAN1-228ENST00000635853 ATPIF1Q9UII2 106 aa10□□□□□ -0.81
SPTAN1-228ENST00000635853 CNTNAP5Q8WYK1 1306 aa9.99□□□□□ -0.81
SPTAN1-228ENST00000635853 BTBD19C9JJ37 291 aa9.99□□□□□ -0.81
SPTAN1-228ENST00000635853 TIPRLO75663 272 aa9.99□□□□□ -0.81
SPTAN1-228ENST00000635853 ALDH2P05091 517 aa9.99□□□□□ -0.81
SPTAN1-228ENST00000635853 PPP2R1BP30154 601 aa9.99□□□□□ -0.81
SPTAN1-228ENST00000635853 IL2P60568 153 aa9.99□□□□□ -0.81
SPTAN1-228ENST00000635853 BTG3Q14201 252 aaPredicted RBP9.99□□□□□ -0.81
SPTAN1-228ENST00000635853 SEL1L3Q68CR1 1132 aa9.99□□□□□ -0.81
SPTAN1-228ENST00000635853 PRMT9Q6P2P2 845 aa9.99□□□□□ -0.81
SPTAN1-228ENST00000635853 POTEHQ6S545 545 aa9.99□□□□□ -0.81
SPTAN1-228ENST00000635853 SGF29Q96ES7 293 aa9.99□□□□□ -0.81
SPTAN1-228ENST00000635853 CLPTM1LQ96KA5 538 aa9.99□□□□□ -0.81
SPTAN1-228ENST00000635853 LRRC19Q9H756 370 aa9.99□□□□□ -0.81
SPTAN1-228ENST00000635853 LRRC4BQ9NT99 713 aa9.99□□□□□ -0.81
SPTAN1-228ENST00000635853 AAR2Q9Y312 384 aaKnown RBP9.99□□□□□ -0.81
SPTAN1-228ENST00000635853 RGS5O15539 181 aa9.99□□□□□ -0.81
SPTAN1-228ENST00000635853 NOS1APO75052 506 aaPredicted RBP9.99□□□□□ -0.81
SPTAN1-228ENST00000635853 S100A9P06702 114 aaKnown RBP9.99□□□□□ -0.81
SPTAN1-228ENST00000635853 FGFR3P22607 806 aa9.99□□□□□ -0.81
SPTAN1-228ENST00000635853 CTC1Q2NKJ3 1217 aa9.99□□□□□ -0.81
SPTAN1-228ENST00000635853 C9orf131Q5VYM1 1079 aa9.99□□□□□ -0.81
SPTAN1-228ENST00000635853 ATG9AQ7Z3C6 839 aa9.99□□□□□ -0.81
SPTAN1-228ENST00000635853 SLCO6A1Q86UG4 719 aa9.99□□□□□ -0.81
SPTAN1-228ENST00000635853 DAGLBQ8NCG7 672 aa9.99□□□□□ -0.81
SPTAN1-228ENST00000635853 WDR36Q8NI36 951 aaKnown RBP9.99□□□□□ -0.81
SPTAN1-228ENST00000635853 NIF3L1Q9GZT8 377 aa9.99□□□□□ -0.81
SPTAN1-228ENST00000635853 TCF7L2Q9NQB0 619 aa9.99□□□□□ -0.81
SPTAN1-228ENST00000635853 AHSPQ9NZD4 102 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms