RNA–Protein interactions for RNA: ENST00000634363.1

SNRNP48-203, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 781 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-203ENST00000634363 ENC1O14682 589 aa16.02■□□□□ 0.16
SNRNP48-203ENST00000634363 MOCS3O95396 460 aa16.02■□□□□ 0.16
SNRNP48-203ENST00000634363 LDOC1O95751 146 aaPredicted RBP16.02■□□□□ 0.16
SNRNP48-203ENST00000634363 CYP1A1P04798 512 aaPredicted RBP16.02■□□□□ 0.16
SNRNP48-203ENST00000634363 CD38P28907 300 aa16.02■□□□□ 0.16
SNRNP48-203ENST00000634363 NSFP46459 744 aaKnown RBP16.02■□□□□ 0.16
SNRNP48-203ENST00000634363 PSMD8P48556 350 aa16.02■□□□□ 0.16
SNRNP48-203ENST00000634363 SLC6A3Q01959 620 aa16.02■□□□□ 0.16
SNRNP48-203ENST00000634363 DNAJC3Q13217 504 aa16.02■□□□□ 0.16
SNRNP48-203ENST00000634363 DCAF6Q58WW2 860 aa16.02■□□□□ 0.16
SNRNP48-203ENST00000634363 PITRM1Q5JRX3 1037 aa16.02■□□□□ 0.16
SNRNP48-203ENST00000634363 RNF219Q5W0B1 726 aaPredicted RBP16.02■□□□□ 0.16
SNRNP48-203ENST00000634363 OLFML1Q6UWY5 402 aa16.02■□□□□ 0.16
SNRNP48-203ENST00000634363 TMPRSS12Q86WS5 348 aa16.02■□□□□ 0.16
SNRNP48-203ENST00000634363 LGI2Q8N0V4 545 aa16.02■□□□□ 0.16
SNRNP48-203ENST00000634363 EID2Q8N6I1 236 aa16.02■□□□□ 0.16
SNRNP48-203ENST00000634363 OR2T34Q8NGX1 318 aa16.02■□□□□ 0.16
SNRNP48-203ENST00000634363 CPLX3Q8WVH0 158 aa16.02■□□□□ 0.16
SNRNP48-203ENST00000634363 CNDP2Q96KP4 475 aaKnown RBP16.02■□□□□ 0.16
SNRNP48-203ENST00000634363 FCRL2Q96LA5 508 aaPredicted RBP16.02■□□□□ 0.16
SNRNP48-203ENST00000634363 SERPINB11Q96P15 392 aa16.02■□□□□ 0.16
SNRNP48-203ENST00000634363 BBC3Q96PG8 261 aaPredicted RBP16.02■□□□□ 0.16
SNRNP48-203ENST00000634363 AIPL1Q9NZN9 384 aa16.02■□□□□ 0.16
SNRNP48-203ENST00000634363 SHROOM3Q8TF72 1996 aa16.02■□□□□ 0.15
SNRNP48-203ENST00000634363 TBC1D3DA0A087WVF3 549 aa16.01■□□□□ 0.15
SNRNP48-203ENST00000634363 TBC1D3IA0A087WXS9 549 aa16.01■□□□□ 0.15
SNRNP48-203ENST00000634363 TBC1D3EA0A087X179 549 aa16.01■□□□□ 0.15
SNRNP48-203ENST00000634363 TBC1D3KA0A087X1G2 549 aa16.01■□□□□ 0.15
SNRNP48-203ENST00000634363 EDDM13A0A1B0GTR0 161 aa16.01■□□□□ 0.15
SNRNP48-203ENST00000634363 TARSL2A2RTX5 802 aaKnown RBP16.01■□□□□ 0.15
SNRNP48-203ENST00000634363 TBC1D3FA6NER0 549 aaPredicted RBP16.01■□□□□ 0.15
SNRNP48-203ENST00000634363 TBC1D3LB9A6J9 549 aa16.01■□□□□ 0.15
SNRNP48-203ENST00000634363 WNT9AO14904 365 aa16.01■□□□□ 0.15
SNRNP48-203ENST00000634363 LUC7L3O95232 432 aaKnown RBP16.01■□□□□ 0.15
SNRNP48-203ENST00000634363 IL1BP01584 269 aa16.01■□□□□ 0.15
SNRNP48-203ENST00000634363 TPM1P09493 284 aa16.01■□□□□ 0.15
SNRNP48-203ENST00000634363 TBC1D3HP0C7X1 549 aa16.01■□□□□ 0.15
SNRNP48-203ENST00000634363 GABRB2P47870 512 aa16.01■□□□□ 0.15
SNRNP48-203ENST00000634363 ECT2LQ008S8 904 aa16.01■□□□□ 0.15
SNRNP48-203ENST00000634363 KLHL30Q0D2K2 578 aa16.01■□□□□ 0.15
SNRNP48-203ENST00000634363 TRIM14Q14142 442 aa16.01■□□□□ 0.15
SNRNP48-203ENST00000634363 CLEC16AQ2KHT3 1053 aa16.01■□□□□ 0.15
SNRNP48-203ENST00000634363 MS4A13Q5J8X5 152 aa16.01■□□□□ 0.15
SNRNP48-203ENST00000634363 FAM102AQ5T9C2 384 aaPredicted RBP16.01■□□□□ 0.15
SNRNP48-203ENST00000634363 SPECC1LQ69YQ0 1117 aa16.01■□□□□ 0.15
SNRNP48-203ENST00000634363 TBC1D3GQ6DHY5 549 aa16.01■□□□□ 0.15
SNRNP48-203ENST00000634363 TBC1D3CQ6IPX1 549 aa16.01■□□□□ 0.15
SNRNP48-203ENST00000634363 SND1Q7KZF4 910 aaKnown RBP eCLIP16.01■□□□□ 0.15
SNRNP48-203ENST00000634363 SLC26A9Q7LBE3 791 aa16.01■□□□□ 0.15
SNRNP48-203ENST00000634363 IRF2BP2Q7Z5L9 587 aa16.01■□□□□ 0.15
SNRNP48-203ENST00000634363 TBC1D3Q8IZP1 549 aaPredicted RBP16.01■□□□□ 0.15
SNRNP48-203ENST00000634363 APCDD1Q8J025 514 aa16.01■□□□□ 0.15
SNRNP48-203ENST00000634363 STK40Q8N2I9 435 aa16.01■□□□□ 0.15
SNRNP48-203ENST00000634363 DQX1Q8TE96 717 aaKnown RBP16.01■□□□□ 0.15
SNRNP48-203ENST00000634363 SERAC1Q96JX3 654 aa16.01■□□□□ 0.15
SNRNP48-203ENST00000634363 FAM129BQ96TA1 746 aa16.01■□□□□ 0.15
SNRNP48-203ENST00000634363 GDF3Q9NR23 364 aa16.01■□□□□ 0.15
SNRNP48-203ENST00000634363 XPO7Q9UIA9 1087 aaKnown RBP16.01■□□□□ 0.15
SNRNP48-203ENST00000634363 CAPN11Q9UMQ6 739 aa16.01■□□□□ 0.15
SNRNP48-203ENST00000634363 TLR6Q9Y2C9 796 aa16.01■□□□□ 0.15
SNRNP48-203ENST00000634363 LUC7L2Q9Y383 392 aaKnown RBP16.01■□□□□ 0.15
SNRNP48-203ENST00000634363 AK5Q9Y6K8 562 aa16.01■□□□□ 0.15
SNRNP48-203ENST00000634363 FREM2Q5SZK8 3169 aa16.01■□□□□ 0.15
SNRNP48-203ENST00000634363 APC2O95996 2303 aa16■□□□□ 0.15
SNRNP48-203ENST00000634363 FASNP49327 2511 aaKnown RBP16■□□□□ 0.15
SNRNP48-203ENST00000634363 NBEAQ8NFP9 2946 aa16■□□□□ 0.15
SNRNP48-203ENST00000634363 DAB1O75553 588 aa16■□□□□ 0.15
SNRNP48-203ENST00000634363 GRAP2O75791 330 aa16■□□□□ 0.15
SNRNP48-203ENST00000634363 GYPCP04921 128 aa16■□□□□ 0.15
SNRNP48-203ENST00000634363 FYNP06241 537 aa16■□□□□ 0.15
SNRNP48-203ENST00000634363 SRPRAP08240 638 aaKnown RBP16■□□□□ 0.15
SNRNP48-203ENST00000634363 UNGP13051 313 aaPredicted RBP16■□□□□ 0.15
SNRNP48-203ENST00000634363 TNFAIP3P21580 790 aa16■□□□□ 0.15
SNRNP48-203ENST00000634363 MMP8P22894 467 aa16■□□□□ 0.15
SNRNP48-203ENST00000634363 HNF1BP35680 557 aa16■□□□□ 0.15
SNRNP48-203ENST00000634363 SCNN1AP37088 669 aa16■□□□□ 0.15
SNRNP48-203ENST00000634363 NNMTP40261 264 aa16■□□□□ 0.15
SNRNP48-203ENST00000634363 ZBED6P86452 979 aa16■□□□□ 0.15
SNRNP48-203ENST00000634363 SEMG2Q02383 582 aa16■□□□□ 0.15
SNRNP48-203ENST00000634363 CENPCQ03188 943 aa16■□□□□ 0.15
SNRNP48-203ENST00000634363 BNIP3Q12983 259 aa16■□□□□ 0.15
SNRNP48-203ENST00000634363 NNTQ13423 1086 aa16■□□□□ 0.15
SNRNP48-203ENST00000634363 TAF5Q15542 800 aa16■□□□□ 0.15
SNRNP48-203ENST00000634363 TDRD12Q587J7 1177 aaKnown RBP16■□□□□ 0.15
SNRNP48-203ENST00000634363 SYPL2Q5VXT5 272 aa16■□□□□ 0.15
SNRNP48-203ENST00000634363 RAP1GAP2Q684P5 730 aa16■□□□□ 0.15
SNRNP48-203ENST00000634363 SARM1Q6SZW1 724 aa16■□□□□ 0.15
SNRNP48-203ENST00000634363 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16■□□□□ 0.15
SNRNP48-203ENST00000634363 TAC4Q86UU9 113 aa16■□□□□ 0.15
SNRNP48-203ENST00000634363 XYLT1Q86Y38 959 aa16■□□□□ 0.15
SNRNP48-203ENST00000634363 AADATQ8N5Z0 425 aa16■□□□□ 0.15
SNRNP48-203ENST00000634363 SLC30A5Q8TAD4 765 aa16■□□□□ 0.15
SNRNP48-203ENST00000634363 PIP4K2CQ8TBX8 421 aa16■□□□□ 0.15
SNRNP48-203ENST00000634363 PCDHB18PQ96TA0 734 aa16■□□□□ 0.15
SNRNP48-203ENST00000634363 C11orf70Q9BRQ4 267 aa16■□□□□ 0.15
SNRNP48-203ENST00000634363 TRIM5Q9C035 493 aa16■□□□□ 0.15
SNRNP48-203ENST00000634363 RBSNQ9H1K0 784 aa16■□□□□ 0.15
SNRNP48-203ENST00000634363 FAM204AQ9H8W3 233 aa16■□□□□ 0.15
SNRNP48-203ENST00000634363 ADAMTS1Q9UHI8 967 aa16■□□□□ 0.15
SNRNP48-203ENST00000634363 FZD4Q9ULV1 537 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms