RNA–Protein interactions for RNA: ENST00000626028.1

SF1-220, Transcript of splicing factor 1, humanhuman

TSL 2 BASIC

Gene SF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-220ENST00000626028 VPS36Q86VN1 386 aa22.91■■□□□ 1.26
SF1-220ENST00000626028 CACUL1Q86Y37 369 aa22.91■■□□□ 1.26
SF1-220ENST00000626028 FNIP1Q8TF40 1166 aa22.91■■□□□ 1.26
SF1-220ENST00000626028 CCDC114Q96M63 670 aa22.91■■□□□ 1.26
SF1-220ENST00000626028 PSMB7Q99436 277 aa22.91■■□□□ 1.26
SF1-220ENST00000626028 EIF3CQ99613 913 aaKnown RBP22.91■■□□□ 1.26
SF1-220ENST00000626028 NCAPGQ9BPX3 1015 aa22.91■■□□□ 1.26
SF1-220ENST00000626028 ZDHHC5Q9C0B5 715 aa22.91■■□□□ 1.26
SF1-220ENST00000626028 OSGEPQ9NPF4 335 aa22.91■■□□□ 1.26
SF1-220ENST00000626028 FBXL12Q9NXK8 326 aa22.91■■□□□ 1.26
SF1-220ENST00000626028 SNX10Q9Y5X0 201 aa22.91■■□□□ 1.26
SF1-220ENST00000626028 TP53BP1Q12888 1972 aaPredicted RBP22.9■■□□□ 1.26
SF1-220ENST00000626028 PCNX2A6NKB5 2137 aa22.9■■□□□ 1.26
SF1-220ENST00000626028 A0A1B0GTW7 788 aa22.9■■□□□ 1.26
SF1-220ENST00000626028 CDX4O14627 284 aaPredicted RBP22.9■■□□□ 1.26
SF1-220ENST00000626028 MCF2LO15068 1137 aa22.9■■□□□ 1.26
SF1-220ENST00000626028 GJB6O95452 261 aa22.9■■□□□ 1.26
SF1-220ENST00000626028 FTLP02792 175 aaPredicted RBP22.9■■□□□ 1.26
SF1-220ENST00000626028 SLC8A1P32418 973 aa22.9■■□□□ 1.26
SF1-220ENST00000626028 HTR7P34969 479 aa22.9■■□□□ 1.26
SF1-220ENST00000626028 DLG2Q15700 870 aa22.9■■□□□ 1.26
SF1-220ENST00000626028 EFHC2Q5JST6 749 aa22.9■■□□□ 1.26
SF1-220ENST00000626028 DCAF12L1Q5VU92 463 aa22.9■■□□□ 1.26
SF1-220ENST00000626028 FAM46CQ5VWP2 391 aa22.9■■□□□ 1.26
SF1-220ENST00000626028 RETSATQ6NUM9 610 aa22.9■■□□□ 1.26
SF1-220ENST00000626028 TFAP2DQ7Z6R9 452 aa22.9■■□□□ 1.26
SF1-220ENST00000626028 FAM124AQ86V42 546 aa22.9■■□□□ 1.26
SF1-220ENST00000626028 MMAAQ8IVH4 418 aaKnown RBP22.9■■□□□ 1.26
SF1-220ENST00000626028 OR8D1Q8WZ84 308 aa22.9■■□□□ 1.26
SF1-220ENST00000626028 TBC1D31Q96DN5 1066 aa22.9■■□□□ 1.26
SF1-220ENST00000626028 ISCUQ9H1K1 167 aa22.9■■□□□ 1.26
SF1-220ENST00000626028 MTG2Q9H4K7 406 aa22.9■■□□□ 1.26
SF1-220ENST00000626028 TMEM248Q9NWD8 314 aa22.9■■□□□ 1.26
SF1-220ENST00000626028 DONSONQ9NYP3 566 aa22.9■■□□□ 1.26
SF1-220ENST00000626028 TAS2R14Q9NYV8 317 aa22.9■■□□□ 1.26
SF1-220ENST00000626028 VPS51Q9UID3 782 aa22.9■■□□□ 1.26
SF1-220ENST00000626028 LUC7L2Q9Y383 392 aaKnown RBP22.9■■□□□ 1.26
SF1-220ENST00000626028 FARP1Q9Y4F1 1045 aaPredicted RBP22.9■■□□□ 1.26
SF1-220ENST00000626028 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP22.9■■□□□ 1.262e-9■■□□□ 12.9
SF1-220ENST00000626028 ATXN2Q99700 1313 aaKnown RBP22.89■■□□□ 1.26
SF1-220ENST00000626028 A0A0D9SEW6 157 aa22.89■■□□□ 1.25
SF1-220ENST00000626028 DDX3XO00571 662 aaKnown RBP eCLIP22.89■■□□□ 1.256e-44■■■■□ 22.7
SF1-220ENST00000626028 SLC7A4O43246 635 aa22.89■■□□□ 1.25
SF1-220ENST00000626028 CCP110O43303 1012 aa22.89■■□□□ 1.25
SF1-220ENST00000626028 LRIG2O94898 1065 aa22.89■■□□□ 1.25
SF1-220ENST00000626028 GOT1P17174 413 aa22.89■■□□□ 1.25
SF1-220ENST00000626028 ENGP17813 658 aa22.89■■□□□ 1.25
SF1-220ENST00000626028 GNA12Q03113 381 aa22.89■■□□□ 1.25
SF1-220ENST00000626028 ACCSLQ4AC99 568 aa22.89■■□□□ 1.25
SF1-220ENST00000626028 RAB6CQ53S08 254 aa22.89■■□□□ 1.25
SF1-220ENST00000626028 NLRP14Q86W24 1093 aa22.89■■□□□ 1.25
SF1-220ENST00000626028 STK40Q8N2I9 435 aa22.89■■□□□ 1.25
SF1-220ENST00000626028 CCDC185Q8N715 623 aa22.89■■□□□ 1.25
SF1-220ENST00000626028 FAM131CQ96AQ9 280 aa22.89■■□□□ 1.25
SF1-220ENST00000626028 OMDQ99983 421 aa22.89■■□□□ 1.25
SF1-220ENST00000626028 CEP44Q9C0F1 390 aa22.89■■□□□ 1.25
SF1-220ENST00000626028 RAB6CQ9H0N0 254 aa22.89■■□□□ 1.25
SF1-220ENST00000626028 KDM4CQ9H3R0 1056 aa22.89■■□□□ 1.25
SF1-220ENST00000626028 MRPL47Q9HD33 250 aaKnown RBP22.89■■□□□ 1.25
SF1-220ENST00000626028 IFNKQ9P0W0 207 aa22.89■■□□□ 1.25
SF1-220ENST00000626028 ZBTB32Q9Y2Y4 487 aaPredicted RBP22.89■■□□□ 1.25
SF1-220ENST00000626028 SCINQ9Y6U3 715 aa22.89■■□□□ 1.25
SF1-220ENST00000626028 SPTBN2O15020 2390 aa22.89■■□□□ 1.25
SF1-220ENST00000626028 DCDC2BA2VCK2 349 aa22.88■■□□□ 1.25
SF1-220ENST00000626028 ARHGAP33O14559 1287 aa22.88■■□□□ 1.25
SF1-220ENST00000626028 MID1O15344 667 aa22.88■■□□□ 1.25
SF1-220ENST00000626028 SERPING1P05155 500 aa22.88■■□□□ 1.25
SF1-220ENST00000626028 SRCP12931 536 aa22.88■■□□□ 1.25
SF1-220ENST00000626028 GEMIN4P57678 1058 aaKnown RBP22.88■■□□□ 1.25
SF1-220ENST00000626028 TMC6Q7Z403 805 aa22.88■■□□□ 1.25
SF1-220ENST00000626028 ATP11CQ8NB49 1132 aa22.88■■□□□ 1.25
SF1-220ENST00000626028 MAGEH1Q9H213 219 aa22.88■■□□□ 1.25
SF1-220ENST00000626028 TMEM191CA6NGB0 347 aa22.87■■□□□ 1.25
SF1-220ENST00000626028 LRRC72A6NJI9 287 aa22.87■■□□□ 1.25
SF1-220ENST00000626028 C4orf47A7E2U8 309 aa22.87■■□□□ 1.25
SF1-220ENST00000626028 TMCO5BA8MYB1 307 aa22.87■■□□□ 1.25
SF1-220ENST00000626028 UPK3BL1B0FP48 263 aa22.87■■□□□ 1.25
SF1-220ENST00000626028 UPK3BL2E5RIL1 263 aa22.87■■□□□ 1.25
SF1-220ENST00000626028 C1QTNF3-AMACRE9PGA6 284 aa22.87■■□□□ 1.25
SF1-220ENST00000626028 BCAT2O15382 392 aaPredicted RBP22.87■■□□□ 1.25
SF1-220ENST00000626028 CBFA2T2O43439 604 aa22.87■■□□□ 1.25
SF1-220ENST00000626028 IL1BP01584 269 aa22.87■■□□□ 1.25
SF1-220ENST00000626028 ATXN3P54252 364 aaPredicted RBP22.87■■□□□ 1.25
SF1-220ENST00000626028 CCDC15Q0P6D6 951 aa22.87■■□□□ 1.25
SF1-220ENST00000626028 ACAP1Q15027 740 aa22.87■■□□□ 1.25
SF1-220ENST00000626028 HGSNATQ68CP4 663 aa22.87■■□□□ 1.25
SF1-220ENST00000626028 RWDD4Q6NW29 188 aaKnown RBP22.87■■□□□ 1.25
SF1-220ENST00000626028 DRC7Q8IY82 874 aa22.87■■□□□ 1.25
SF1-220ENST00000626028 C1orf216Q8TAB5 229 aa22.87■■□□□ 1.25
SF1-220ENST00000626028 GANCQ8TET4 914 aa22.87■■□□□ 1.25
SF1-220ENST00000626028 EPAS1Q99814 870 aa22.87■■□□□ 1.25
SF1-220ENST00000626028 ACE2Q9BYF1 805 aaPredicted RBP22.87■■□□□ 1.25
SF1-220ENST00000626028 TSPY26PQ9H489 355 aa22.87■■□□□ 1.25
SF1-220ENST00000626028 PPM1HQ9ULR3 514 aa22.87■■□□□ 1.25
SF1-220ENST00000626028 FZD10Q9ULW2 581 aa22.87■■□□□ 1.25
SF1-220ENST00000626028 NEU3Q9UQ49 428 aa22.87■■□□□ 1.25
SF1-220ENST00000626028 PLXNA2O75051 1894 aa22.87■■□□□ 1.25
SF1-220ENST00000626028 KNL1Q8NG31 2342 aa22.87■■□□□ 1.25
SF1-220ENST00000626028 C10orf142B7Z368 130 aa22.86■■□□□ 1.25
SF1-220ENST00000626028 RNASEH2AO75792 299 aaKnown RBP22.86■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms