RNA–Protein interactions for RNA: ENST00000623466.1

PCDHB17P-202, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 3,066 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-202ENST00000623466 GSDMBQ8TAX9 411 aa13.68□□□□□ -0.22
PCDHB17P-202ENST00000623466 PHF12Q96QT6 1004 aa13.68□□□□□ -0.22
PCDHB17P-202ENST00000623466 EBNA1BP2Q99848 306 aaKnown RBP13.68□□□□□ -0.22
PCDHB17P-202ENST00000623466 SLC4A5Q9BY07 1137 aa13.68□□□□□ -0.22
PCDHB17P-202ENST00000623466 ARHGAP39Q9C0H5 1083 aa13.68□□□□□ -0.22
PCDHB17P-202ENST00000623466 C1orf21Q9H246 121 aa13.68□□□□□ -0.22
PCDHB17P-202ENST00000623466 MIOSQ9NXC5 875 aa13.68□□□□□ -0.22
PCDHB17P-202ENST00000623466 SEPT10Q9P0V9 454 aa13.68□□□□□ -0.22
PCDHB17P-202ENST00000623466 CASTOR2A6NHX0 329 aa13.68□□□□□ -0.22
PCDHB17P-202ENST00000623466 RRN3P2A6NIE6 340 aa13.68□□□□□ -0.22
PCDHB17P-202ENST00000623466 TRDMT1O14717 391 aaKnown RBP13.68□□□□□ -0.22
PCDHB17P-202ENST00000623466 APOL1O14791 398 aa13.68□□□□□ -0.22
PCDHB17P-202ENST00000623466 MAP3K7CLP57077 242 aa13.68□□□□□ -0.22
PCDHB17P-202ENST00000623466 LILRA4P59901 499 aa13.68□□□□□ -0.22
PCDHB17P-202ENST00000623466 IFRD2Q12894 506 aaPredicted RBP13.68□□□□□ -0.22
PCDHB17P-202ENST00000623466 ITGA7Q13683 1181 aa13.68□□□□□ -0.22
PCDHB17P-202ENST00000623466 PDE1CQ14123 709 aaPredicted RBP13.68□□□□□ -0.22
PCDHB17P-202ENST00000623466 DCAF4L1Q3SXM0 396 aa13.68□□□□□ -0.22
PCDHB17P-202ENST00000623466 PGBD4Q96DM1 585 aa13.68□□□□□ -0.22
PCDHB17P-202ENST00000623466 HSPBAP1Q96EW2 488 aa13.68□□□□□ -0.22
PCDHB17P-202ENST00000623466 MED10Q9BTT4 135 aa13.68□□□□□ -0.22
PCDHB17P-202ENST00000623466 UTP6Q9NYH9 597 aaKnown RBP13.68□□□□□ -0.22
PCDHB17P-202ENST00000623466 FAM159BA6NKW6 160 aa13.67□□□□□ -0.22
PCDHB17P-202ENST00000623466 E9PBE3 544 aa13.67□□□□□ -0.22
PCDHB17P-202ENST00000623466 KLHL41O60662 606 aa13.67□□□□□ -0.22
PCDHB17P-202ENST00000623466 AMHP03971 560 aa13.67□□□□□ -0.22
PCDHB17P-202ENST00000623466 IDH3AP50213 366 aa13.67□□□□□ -0.22
PCDHB17P-202ENST00000623466 PSMD7P51665 324 aa13.67□□□□□ -0.22
PCDHB17P-202ENST00000623466 SESN2P58004 480 aaPredicted RBP13.67□□□□□ -0.22
PCDHB17P-202ENST00000623466 TRIM32Q13049 653 aa13.67□□□□□ -0.22
PCDHB17P-202ENST00000623466 PDK3Q15120 406 aa13.67□□□□□ -0.22
PCDHB17P-202ENST00000623466 C14orf80Q86SX3 495 aa13.67□□□□□ -0.22
PCDHB17P-202ENST00000623466 TNS4Q8IZW8 715 aa13.67□□□□□ -0.22
PCDHB17P-202ENST00000623466 TFB1MQ8WVM0 346 aaKnown RBP13.67□□□□□ -0.22
PCDHB17P-202ENST00000623466 SNX10Q9Y5X0 201 aa13.67□□□□□ -0.22
PCDHB17P-202ENST00000623466 COL1A2P08123 1366 aa13.67□□□□□ -0.22
PCDHB17P-202ENST00000623466 ENDOD1O94919 500 aa13.67□□□□□ -0.22
PCDHB17P-202ENST00000623466 CTGFP29279 349 aa13.67□□□□□ -0.22
PCDHB17P-202ENST00000623466 HNRNPDQ14103 355 aaKnown RBP13.67□□□□□ -0.22
PCDHB17P-202ENST00000623466 ZNF362Q5T0B9 420 aaPredicted RBP13.67□□□□□ -0.22
PCDHB17P-202ENST00000623466 PDPK2PQ6A1A2 396 aa13.67□□□□□ -0.22
PCDHB17P-202ENST00000623466 KCNT2Q6UVM3 1135 aa13.67□□□□□ -0.22
PCDHB17P-202ENST00000623466 ALKAL1Q6UXT8 129 aa13.67□□□□□ -0.22
PCDHB17P-202ENST00000623466 PPP1R14BQ96C90 147 aa13.67□□□□□ -0.22
PCDHB17P-202ENST00000623466 DNAJB4Q9UDY4 337 aa13.67□□□□□ -0.22
PCDHB17P-202ENST00000623466 UBQLN1Q9UMX0 589 aaKnown RBP13.67□□□□□ -0.22
PCDHB17P-202ENST00000623466 AP4E1Q9UPM8 1137 aa13.67□□□□□ -0.22
PCDHB17P-202ENST00000623466 HUS1O60921 280 aa13.67□□□□□ -0.22
PCDHB17P-202ENST00000623466 ITGAXP20702 1163 aa13.67□□□□□ -0.22
PCDHB17P-202ENST00000623466 ABCG1P45844 678 aa13.67□□□□□ -0.22
PCDHB17P-202ENST00000623466 FOLH1Q04609 750 aa13.67□□□□□ -0.22
PCDHB17P-202ENST00000623466 TBL3Q12788 808 aaKnown RBP13.67□□□□□ -0.22
PCDHB17P-202ENST00000623466 ITGA9Q13797 1035 aa13.67□□□□□ -0.22
PCDHB17P-202ENST00000623466 CYLC2Q14093 348 aaPredicted RBP13.67□□□□□ -0.22
PCDHB17P-202ENST00000623466 THOC7Q6I9Y2 204 aaKnown RBP13.67□□□□□ -0.22
PCDHB17P-202ENST00000623466 PAOXQ6QHF9 649 aa13.67□□□□□ -0.22
PCDHB17P-202ENST00000623466 ZNF467Q7Z7K2 595 aaPredicted RBP13.67□□□□□ -0.22
PCDHB17P-202ENST00000623466 KCTD15Q96SI1 283 aaPredicted RBP13.67□□□□□ -0.22
PCDHB17P-202ENST00000623466 AP5M1Q9H0R1 490 aa13.67□□□□□ -0.22
PCDHB17P-202ENST00000623466 TMEM30AQ9NV96 361 aa13.67□□□□□ -0.22
PCDHB17P-202ENST00000623466 INPP5FQ9Y2H2 1132 aa13.67□□□□□ -0.22
PCDHB17P-202ENST00000623466 PLXNA1Q9UIW2 1896 aa13.67□□□□□ -0.22
PCDHB17P-202ENST00000623466 F8W810 466 aa13.66□□□□□ -0.22
PCDHB17P-202ENST00000623466 PIRO00625 290 aa13.66□□□□□ -0.22
PCDHB17P-202ENST00000623466 PTGESO14684 152 aa13.66□□□□□ -0.22
PCDHB17P-202ENST00000623466 BIRC5O15392 142 aa13.66□□□□□ -0.22
PCDHB17P-202ENST00000623466 L1CAMP32004 1257 aa13.66□□□□□ -0.22
PCDHB17P-202ENST00000623466 CCR3P51677 355 aa13.66□□□□□ -0.22
PCDHB17P-202ENST00000623466 GK3PQ14409 553 aa13.66□□□□□ -0.22
PCDHB17P-202ENST00000623466 PCLAFQ15004 111 aa13.66□□□□□ -0.22
PCDHB17P-202ENST00000623466 TBCCQ15814 346 aa13.66□□□□□ -0.22
PCDHB17P-202ENST00000623466 CLIP3Q96DZ5 547 aa13.66□□□□□ -0.22
PCDHB17P-202ENST00000623466 SORT1Q99523 831 aa13.66□□□□□ -0.22
PCDHB17P-202ENST00000623466 NRDE2Q9H7Z3 1164 aa13.66□□□□□ -0.22
PCDHB17P-202ENST00000623466 TMEM216Q9P0N5 145 aa13.66□□□□□ -0.22
PCDHB17P-202ENST00000623466 SMIM35A0A1B0GVV1 85 aa13.66□□□□□ -0.22
PCDHB17P-202ENST00000623466 CCNT2O60583 730 aaKnown RBP13.66□□□□□ -0.22
PCDHB17P-202ENST00000623466 FSCN1Q16658 493 aaKnown RBP13.66□□□□□ -0.22
PCDHB17P-202ENST00000623466 TMEM259Q4ZIN3 620 aa13.66□□□□□ -0.22
PCDHB17P-202ENST00000623466 SMUG1Q53HV7 270 aa13.66□□□□□ -0.22
PCDHB17P-202ENST00000623466 BOLA3Q53S33 107 aa13.66□□□□□ -0.22
PCDHB17P-202ENST00000623466 AAGABQ6PD74 315 aa13.66□□□□□ -0.22
PCDHB17P-202ENST00000623466 CMC1Q7Z7K0 106 aa13.66□□□□□ -0.22
PCDHB17P-202ENST00000623466 HACE1Q8IYU2 909 aa13.66□□□□□ -0.22
PCDHB17P-202ENST00000623466 RNF148Q8N7C7 305 aa13.66□□□□□ -0.22
PCDHB17P-202ENST00000623466 ANKRD52Q8NB46 1076 aa13.66□□□□□ -0.22
PCDHB17P-202ENST00000623466 CCNYQ8ND76 341 aa13.66□□□□□ -0.22
PCDHB17P-202ENST00000623466 EDEM1Q92611 657 aa13.66□□□□□ -0.22
PCDHB17P-202ENST00000623466 MTMR10Q9NXD2 777 aa13.66□□□□□ -0.22
PCDHB17P-202ENST00000623466 AK5Q9Y6K8 562 aa13.66□□□□□ -0.22
PCDHB17P-202ENST00000623466 GOLGA8QA0A0J9YX86 632 aa13.65□□□□□ -0.22
PCDHB17P-202ENST00000623466 MYBPHLA2RUH7 354 aa13.65□□□□□ -0.22
PCDHB17P-202ENST00000623466 GOLGA8OA6NCC3 632 aa13.65□□□□□ -0.22
PCDHB17P-202ENST00000623466 GOLGA8NF8WBI6 632 aa13.65□□□□□ -0.22
PCDHB17P-202ENST00000623466 NRP1O14786 923 aa13.65□□□□□ -0.22
PCDHB17P-202ENST00000623466 ZBTB14O43829 449 aa13.65□□□□□ -0.22
PCDHB17P-202ENST00000623466 PLIN3O60664 434 aa13.65□□□□□ -0.22
PCDHB17P-202ENST00000623466 ATP6V1B1P15313 513 aa13.65□□□□□ -0.22
PCDHB17P-202ENST00000623466 HOXD11P31277 338 aaPredicted RBP13.65□□□□□ -0.22
PCDHB17P-202ENST00000623466 TAF6P49848 677 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms