RNA–Protein interactions for RNA: ENST00000623342.1

SND1-IT1-201, SND1 intronic transcript 1, humanhuman

BASIC

Gene SND1-IT1, Length 2,481 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1-201ENST00000623342 DSC3Q14574 896 aa8.48□□□□□ -1.05
SND1-IT1-201ENST00000623342 KPNB1Q14974 876 aaKnown RBP8.48□□□□□ -1.05
SND1-IT1-201ENST00000623342 BRMS1LQ5PSV4 323 aa8.48□□□□□ -1.05
SND1-IT1-201ENST00000623342 LRRTM3Q86VH5 581 aa8.48□□□□□ -1.05
SND1-IT1-201ENST00000623342 KLHDC8BQ8IXV7 354 aa8.48□□□□□ -1.05
SND1-IT1-201ENST00000623342 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.48□□□□□ -1.05
SND1-IT1-201ENST00000623342 CNTD1Q8N815 330 aa8.48□□□□□ -1.05
SND1-IT1-201ENST00000623342 SCAMP5Q8TAC9 235 aa8.48□□□□□ -1.05
SND1-IT1-201ENST00000623342 URGCPQ8TCY9 931 aa8.48□□□□□ -1.05
SND1-IT1-201ENST00000623342 HASPINQ8TF76 798 aa8.48□□□□□ -1.05
SND1-IT1-201ENST00000623342 AZIN2Q96A70 460 aa8.48□□□□□ -1.05
SND1-IT1-201ENST00000623342 HAPLN3Q96S86 360 aa8.48□□□□□ -1.05
SND1-IT1-201ENST00000623342 TMEM209Q96SK2 561 aa8.48□□□□□ -1.05
SND1-IT1-201ENST00000623342 MYCBPQ99417 103 aaPredicted RBP8.48□□□□□ -1.05
SND1-IT1-201ENST00000623342 SORT1Q99523 831 aa8.48□□□□□ -1.05
SND1-IT1-201ENST00000623342 SIK2Q9H0K1 926 aa8.48□□□□□ -1.05
SND1-IT1-201ENST00000623342 IARS2Q9NSE4 1012 aaKnown RBP8.48□□□□□ -1.05
SND1-IT1-201ENST00000623342 ABCC13Q9NSE7 274 aa8.48□□□□□ -1.05
SND1-IT1-201ENST00000623342 ZNF358Q9NW07 568 aa8.48□□□□□ -1.05
SND1-IT1-201ENST00000623342 NSMCE4AQ9NXX6 385 aa8.48□□□□□ -1.05
SND1-IT1-201ENST00000623342 UBP1Q9NZI7 540 aa8.48□□□□□ -1.05
SND1-IT1-201ENST00000623342 NEU3Q9UQ49 428 aa8.48□□□□□ -1.05
SND1-IT1-201ENST00000623342 APOBEC2Q9Y235 224 aaKnown RBP8.48□□□□□ -1.05
SND1-IT1-201ENST00000623342 AAR2Q9Y312 384 aaKnown RBP8.48□□□□□ -1.05
SND1-IT1-201ENST00000623342 E2F8A0AVK6 867 aa8.47□□□□□ -1.05
SND1-IT1-201ENST00000623342 ARHGEF37A1IGU5 675 aa8.47□□□□□ -1.05
SND1-IT1-201ENST00000623342 PRR5-ARHGAP8B1AHC4 643 aa8.47□□□□□ -1.05
SND1-IT1-201ENST00000623342 FGF10O15520 208 aaPredicted RBP8.47□□□□□ -1.05
SND1-IT1-201ENST00000623342 KLHL2O95198 593 aa8.47□□□□□ -1.05
SND1-IT1-201ENST00000623342 AOC1P19801 751 aa8.47□□□□□ -1.05
SND1-IT1-201ENST00000623342 NMBRP28336 390 aa8.47□□□□□ -1.05
SND1-IT1-201ENST00000623342 HTR7P34969 479 aa8.47□□□□□ -1.05
SND1-IT1-201ENST00000623342 GMPRP36959 345 aa8.47□□□□□ -1.05
SND1-IT1-201ENST00000623342 HADHAP40939 763 aa8.47□□□□□ -1.05
SND1-IT1-201ENST00000623342 CLNS1AP54105 237 aaKnown RBP8.47□□□□□ -1.05
SND1-IT1-201ENST00000623342 NKX3-2P78367 333 aa8.47□□□□□ -1.05
SND1-IT1-201ENST00000623342 ARHGAP8P85298 464 aa8.47□□□□□ -1.05
SND1-IT1-201ENST00000623342 KDSRQ06136 332 aa8.47□□□□□ -1.05
SND1-IT1-201ENST00000623342 CRHR2Q13324 411 aa8.47□□□□□ -1.05
SND1-IT1-201ENST00000623342 ITGA9Q13797 1035 aa8.47□□□□□ -1.05
SND1-IT1-201ENST00000623342 UBAP2LQ14157 1087 aaKnown RBP8.47□□□□□ -1.05
SND1-IT1-201ENST00000623342 TAF11Q15544 211 aa8.47□□□□□ -1.05
SND1-IT1-201ENST00000623342 DNAL1Q4LDG9 190 aa8.47□□□□□ -1.05
SND1-IT1-201ENST00000623342 ACSBG2Q5FVE4 666 aa8.47□□□□□ -1.05
SND1-IT1-201ENST00000623342 BTBD8Q5XKL5 378 aa8.47□□□□□ -1.05
SND1-IT1-201ENST00000623342 PDPK2PQ6A1A2 396 aa8.47□□□□□ -1.05
SND1-IT1-201ENST00000623342 OTOP3Q7RTS5 596 aa8.47□□□□□ -1.05
SND1-IT1-201ENST00000623342 CLEC14AQ86T13 490 aa8.47□□□□□ -1.05
SND1-IT1-201ENST00000623342 PLD6Q8N2A8 252 aaKnown RBP8.47□□□□□ -1.05
SND1-IT1-201ENST00000623342 ATPAF2Q8N5M1 289 aa8.47□□□□□ -1.05
SND1-IT1-201ENST00000623342 RBM15BQ8NDT2 890 aaKnown RBP8.47□□□□□ -1.05
SND1-IT1-201ENST00000623342 OR6Y1Q8NGX8 325 aa8.47□□□□□ -1.05
SND1-IT1-201ENST00000623342 USP33Q8TEY7 942 aa8.47□□□□□ -1.05
SND1-IT1-201ENST00000623342 SREK1Q8WXA9 508 aaKnown RBP8.47□□□□□ -1.05
SND1-IT1-201ENST00000623342 ADAM2Q99965 735 aa8.47□□□□□ -1.05
SND1-IT1-201ENST00000623342 MCMBPQ9BTE3 642 aa8.47□□□□□ -1.05
SND1-IT1-201ENST00000623342 KIFC1Q9BW19 673 aa8.47□□□□□ -1.05
SND1-IT1-201ENST00000623342 PNPOQ9NVS9 261 aa8.47□□□□□ -1.05
SND1-IT1-201ENST00000623342 DNAJC28Q9NX36 388 aa8.47□□□□□ -1.05
SND1-IT1-201ENST00000623342 INPP5FQ9Y2H2 1132 aa8.47□□□□□ -1.05
SND1-IT1-201ENST00000623342 LRRC42Q9Y546 428 aa8.47□□□□□ -1.05
SND1-IT1-201ENST00000623342 SHROOM3Q8TF72 1996 aa8.47□□□□□ -1.05
SND1-IT1-201ENST00000623342 PAGE1O75459 146 aa8.47□□□□□ -1.05
SND1-IT1-201ENST00000623342 C2P06681 752 aa8.47□□□□□ -1.05
SND1-IT1-201ENST00000623342 SKIP12755 728 aa8.47□□□□□ -1.05
SND1-IT1-201ENST00000623342 ALOX15P16050 662 aaPredicted RBP8.47□□□□□ -1.05
SND1-IT1-201ENST00000623342 HOXC13P31276 330 aa8.47□□□□□ -1.05
SND1-IT1-201ENST00000623342 CCR1P32246 355 aa8.47□□□□□ -1.05
SND1-IT1-201ENST00000623342 PTDSS1P48651 473 aaKnown RBP8.47□□□□□ -1.05
SND1-IT1-201ENST00000623342 IDH3AP50213 366 aa8.47□□□□□ -1.05
SND1-IT1-201ENST00000623342 LPIN1Q14693 890 aa8.47□□□□□ -1.05
SND1-IT1-201ENST00000623342 RABGAP1LQ5R372 815 aa8.47□□□□□ -1.05
SND1-IT1-201ENST00000623342 RGMBQ6NW40 437 aa8.47□□□□□ -1.05
SND1-IT1-201ENST00000623342 ARHGAP36Q6ZRI8 547 aa8.47□□□□□ -1.05
SND1-IT1-201ENST00000623342 SAPCD2Q86UD0 394 aa8.47□□□□□ -1.05
SND1-IT1-201ENST00000623342 SPATA2LQ8IUW3 424 aaPredicted RBP8.47□□□□□ -1.05
SND1-IT1-201ENST00000623342 ARHGAP12Q8IWW6 846 aa8.47□□□□□ -1.05
SND1-IT1-201ENST00000623342 TNS4Q8IZW8 715 aa8.47□□□□□ -1.05
SND1-IT1-201ENST00000623342 LZTR1Q8N653 840 aa8.47□□□□□ -1.05
SND1-IT1-201ENST00000623342 MAB21L3Q8N8X9 362 aa8.47□□□□□ -1.05
SND1-IT1-201ENST00000623342 FBXO27Q8NI29 283 aa8.47□□□□□ -1.05
SND1-IT1-201ENST00000623342 WDR60Q8WVS4 1066 aa8.47□□□□□ -1.05
SND1-IT1-201ENST00000623342 TRIB2Q92519 343 aa8.47□□□□□ -1.05
SND1-IT1-201ENST00000623342 VPS39Q96JC1 886 aa8.47□□□□□ -1.05
SND1-IT1-201ENST00000623342 SUSD3Q96L08 255 aa8.47□□□□□ -1.05
SND1-IT1-201ENST00000623342 FCRL5Q96RD9 977 aa8.47□□□□□ -1.05
SND1-IT1-201ENST00000623342 C1orf21Q9H246 121 aa8.47□□□□□ -1.05
SND1-IT1-201ENST00000623342 SMOC2Q9H3U7 446 aa8.47□□□□□ -1.05
SND1-IT1-201ENST00000623342 CATSPERBQ9H7T0 1116 aa8.47□□□□□ -1.05
SND1-IT1-201ENST00000623342 CAB39LQ9H9S4 337 aa8.47□□□□□ -1.05
SND1-IT1-201ENST00000623342 STOML1Q9UBI4 398 aa8.47□□□□□ -1.05
SND1-IT1-201ENST00000623342 PLA2G4CQ9UP65 541 aa8.47□□□□□ -1.05
SND1-IT1-201ENST00000623342 PCDHB12Q9Y5F1 795 aa8.47□□□□□ -1.05
SND1-IT1-201ENST00000623342 TDRD15B5MCY1 1934 aaKnown RBP8.47□□□□□ -1.05
SND1-IT1-201ENST00000623342 TMEM114B3SHH9 223 aa8.46□□□□□ -1.05
SND1-IT1-201ENST00000623342 G3V2L1 256 aa8.46□□□□□ -1.05
SND1-IT1-201ENST00000623342 SEPT4O43236 478 aa8.46□□□□□ -1.05
SND1-IT1-201ENST00000623342 ADAMTS4O75173 837 aa8.46□□□□□ -1.05
SND1-IT1-201ENST00000623342 H2AFYO75367 372 aaKnown RBP8.46□□□□□ -1.05
SND1-IT1-201ENST00000623342 ANXA9O76027 345 aa8.46□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms