RNA–Protein interactions for RNA: ENST00000622020.4

NPHP4-211, Transcript of nephrocystin 4, humanhuman

TSL 5 BASIC

Gene NPHP4, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-211ENST00000622020 ANK1P16157 1881 aa16.07■□□□□ 0.16
NPHP4-211ENST00000622020 RGSL1A5PLK6 1076 aa16.07■□□□□ 0.16
NPHP4-211ENST00000622020 XPO1O14980 1071 aaKnown RBP16.07■□□□□ 0.16
NPHP4-211ENST00000622020 BEST1O76090 585 aa16.07■□□□□ 0.16
NPHP4-211ENST00000622020 PTPN1P18031 435 aaKnown RBP16.07■□□□□ 0.16
NPHP4-211ENST00000622020 MPP3Q13368 585 aa16.07■□□□□ 0.16
NPHP4-211ENST00000622020 VGLL4Q14135 290 aa16.07■□□□□ 0.16
NPHP4-211ENST00000622020 CCDC153Q494R4 210 aa16.07■□□□□ 0.16
NPHP4-211ENST00000622020 GRTP1Q5TC63 336 aa16.07■□□□□ 0.16
NPHP4-211ENST00000622020 CYP2R1Q6VVX0 501 aa16.07■□□□□ 0.16
NPHP4-211ENST00000622020 HFE2Q6ZVN8 426 aa16.07■□□□□ 0.16
NPHP4-211ENST00000622020 PLPPR4Q7Z2D5 763 aa16.07■□□□□ 0.16
NPHP4-211ENST00000622020 ATP6V1E2Q96A05 226 aa16.07■□□□□ 0.16
NPHP4-211ENST00000622020 BFARQ9NZS9 450 aa16.07■□□□□ 0.16
NPHP4-211ENST00000622020 CACNG4Q9UBN1 327 aa16.07■□□□□ 0.16
NPHP4-211ENST00000622020 LCTP09848 1927 aa16.07■□□□□ 0.16
NPHP4-211ENST00000622020 SIP14410 1827 aa16.06■□□□□ 0.16
NPHP4-211ENST00000622020 GAS2O43903 313 aaKnown RBP16.06■□□□□ 0.16
NPHP4-211ENST00000622020 NMBRP28336 390 aa16.06■□□□□ 0.16
NPHP4-211ENST00000622020 LIMK2P53671 638 aa16.06■□□□□ 0.16
NPHP4-211ENST00000622020 USP10Q14694 798 aaKnown RBP16.06■□□□□ 0.16
NPHP4-211ENST00000622020 STXBP5Q5T5C0 1151 aa16.06■□□□□ 0.16
NPHP4-211ENST00000622020 ZNF280DQ6N043 979 aa16.06■□□□□ 0.16
NPHP4-211ENST00000622020 KCNMB4Q86W47 210 aa16.06■□□□□ 0.16
NPHP4-211ENST00000622020 RNF135Q8IUD6 432 aa16.06■□□□□ 0.16
NPHP4-211ENST00000622020 OTUD5Q96G74 571 aa16.06■□□□□ 0.16
NPHP4-211ENST00000622020 VPS39Q96JC1 886 aa16.06■□□□□ 0.16
NPHP4-211ENST00000622020 GALNT8Q9NY28 637 aa16.06■□□□□ 0.16
NPHP4-211ENST00000622020 USP3Q9Y6I4 520 aa16.06■□□□□ 0.16
NPHP4-211ENST00000622020 TSPAN1O60635 241 aa16.06■□□□□ 0.16
NPHP4-211ENST00000622020 HNRNPLP14866 589 aaKnown RBP eCLIP16.06■□□□□ 0.16
NPHP4-211ENST00000622020 RPL5P46777 297 aaKnown RBP16.06■□□□□ 0.16
NPHP4-211ENST00000622020 RALGDSQ12967 914 aa16.06■□□□□ 0.16
NPHP4-211ENST00000622020 CTBP1Q13363 440 aa16.06■□□□□ 0.16
NPHP4-211ENST00000622020 C4orf22Q6V702 233 aa16.06■□□□□ 0.16
NPHP4-211ENST00000622020 RIOX2Q8IUF8 465 aa16.06■□□□□ 0.16
NPHP4-211ENST00000622020 CELF6Q96J87 481 aaKnown RBP16.06■□□□□ 0.16
NPHP4-211ENST00000622020 VPS33BQ9H267 617 aa16.06■□□□□ 0.16
NPHP4-211ENST00000622020 VRTNQ9H8Y1 702 aa16.06■□□□□ 0.16
NPHP4-211ENST00000622020 TLK1Q9UKI8 766 aa16.06■□□□□ 0.16
NPHP4-211ENST00000622020 KIAA1257Q9ULG3 409 aa16.06■□□□□ 0.16
NPHP4-211ENST00000622020 FZD10Q9ULW2 581 aa16.06■□□□□ 0.16
NPHP4-211ENST00000622020 NEMP2A6NFY4 417 aa16.05■□□□□ 0.16
NPHP4-211ENST00000622020 KPNA7A9QM74 516 aa16.05■□□□□ 0.16
NPHP4-211ENST00000622020 NFKBIEO00221 500 aa16.05■□□□□ 0.16
NPHP4-211ENST00000622020 EEF2KO00418 725 aaKnown RBP16.05■□□□□ 0.16
NPHP4-211ENST00000622020 ASLP04424 464 aa16.05■□□□□ 0.16
NPHP4-211ENST00000622020 MYL4P12829 197 aa16.05■□□□□ 0.16
NPHP4-211ENST00000622020 MLNP12872 115 aa16.05■□□□□ 0.16
NPHP4-211ENST00000622020 ALOX15P16050 662 aaPredicted RBP16.05■□□□□ 0.16
NPHP4-211ENST00000622020 GLDCP23378 1020 aa16.05■□□□□ 0.16
NPHP4-211ENST00000622020 TKTP29401 623 aaKnown RBP16.05■□□□□ 0.16
NPHP4-211ENST00000622020 GNL1P36915 607 aaPredicted RBP16.05■□□□□ 0.16
NPHP4-211ENST00000622020 RPL14P50914 215 aaKnown RBP16.05■□□□□ 0.16
NPHP4-211ENST00000622020 ZNF423Q2M1K9 1284 aa16.05■□□□□ 0.16
NPHP4-211ENST00000622020 POTEAQ6S8J7 498 aa16.05■□□□□ 0.16
NPHP4-211ENST00000622020 GK5Q6ZS86 529 aa16.05■□□□□ 0.16
NPHP4-211ENST00000622020 SLC26A9Q7LBE3 791 aa16.05■□□□□ 0.16
NPHP4-211ENST00000622020 PIGZQ86VD9 579 aa16.05■□□□□ 0.16
NPHP4-211ENST00000622020 ABTB1Q969K4 478 aaPredicted RBP16.05■□□□□ 0.16
NPHP4-211ENST00000622020 SERPINI1Q99574 410 aa16.05■□□□□ 0.16
NPHP4-211ENST00000622020 LRRC40Q9H9A6 602 aa16.05■□□□□ 0.16
NPHP4-211ENST00000622020 ERAP1Q9NZ08 941 aa16.05■□□□□ 0.16
NPHP4-211ENST00000622020 PIM2Q9P1W9 311 aa16.05■□□□□ 0.16
NPHP4-211ENST00000622020 MCM3APO60318 1980 aa16.05■□□□□ 0.16
NPHP4-211ENST00000622020 ZCWPW2A0A1B0GU75 182 aa16.05■□□□□ 0.16
NPHP4-211ENST00000622020 CASQ2O14958 399 aaPredicted RBP16.05■□□□□ 0.16
NPHP4-211ENST00000622020 HDAC3O15379 428 aa16.05■□□□□ 0.16
NPHP4-211ENST00000622020 RNASEH2AO75792 299 aaKnown RBP16.05■□□□□ 0.16
NPHP4-211ENST00000622020 IGFBP6P24592 240 aaPredicted RBP16.05■□□□□ 0.16
NPHP4-211ENST00000622020 PTPN9P43378 593 aa16.05■□□□□ 0.16
NPHP4-211ENST00000622020 COG7P83436 770 aa16.05■□□□□ 0.16
NPHP4-211ENST00000622020 INSCQ1MX18 579 aa16.05■□□□□ 0.16
NPHP4-211ENST00000622020 IL23RQ5VWK5 629 aa16.05■□□□□ 0.16
NPHP4-211ENST00000622020 SLC41A1Q8IVJ1 513 aa16.05■□□□□ 0.16
NPHP4-211ENST00000622020 RNF169Q8NCN4 708 aa16.05■□□□□ 0.16
NPHP4-211ENST00000622020 EME1Q96AY2 570 aa16.05■□□□□ 0.16
NPHP4-211ENST00000622020 TMIGD2Q96BF3 282 aa16.05■□□□□ 0.16
NPHP4-211ENST00000622020 ZNF512Q96ME7 567 aaPredicted RBP16.05■□□□□ 0.16
NPHP4-211ENST00000622020 CYP4F12Q9HCS2 524 aa16.05■□□□□ 0.16
NPHP4-211ENST00000622020 ANLNQ9NQW6 1124 aa16.05■□□□□ 0.16
NPHP4-211ENST00000622020 MATN2O00339 956 aa16.05■□□□□ 0.16
NPHP4-211ENST00000622020 SPTLC1O15269 473 aa16.05■□□□□ 0.16
NPHP4-211ENST00000622020 HMGB2P26583 209 aaKnown RBP16.05■□□□□ 0.16
NPHP4-211ENST00000622020 SOX11P35716 441 aa16.05■□□□□ 0.16
NPHP4-211ENST00000622020 NUMBP49757 651 aa16.05■□□□□ 0.16
NPHP4-211ENST00000622020 BST2Q10589 180 aaKnown RBP16.05■□□□□ 0.16
NPHP4-211ENST00000622020 ADGRE1Q14246 886 aa16.05■□□□□ 0.16
NPHP4-211ENST00000622020 DENND6AQ8IWF6 608 aa16.05■□□□□ 0.16
NPHP4-211ENST00000622020 SLC7A14Q8TBB6 771 aa16.05■□□□□ 0.16
NPHP4-211ENST00000622020 FAM96AQ9H5X1 160 aa16.05■□□□□ 0.16
NPHP4-211ENST00000622020 PIGVQ9NUD9 493 aa16.05■□□□□ 0.16
NPHP4-211ENST00000622020 ATXN10Q9UBB4 475 aa16.05■□□□□ 0.16
NPHP4-211ENST00000622020 ZNF638Q14966 1978 aaKnown RBP16.04■□□□□ 0.16
NPHP4-211ENST00000622020 SMIM31A0A1B0GVY4 71 aa16.04■□□□□ 0.16
NPHP4-211ENST00000622020 KCNU1A8MYU2 1149 aa16.04■□□□□ 0.16
NPHP4-211ENST00000622020 GRID2O43424 1007 aa16.04■□□□□ 0.16
NPHP4-211ENST00000622020 ERCC2P18074 760 aa16.04■□□□□ 0.16
NPHP4-211ENST00000622020 PTPN3P26045 913 aa16.04■□□□□ 0.16
NPHP4-211ENST00000622020 PLK1P53350 603 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms