RNA–Protein interactions for RNA: ENST00000621870.4

GGA3-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best)

Gene GGA3, Length 4,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-223ENST00000621870 DTNAQ9Y4J8 743 aa9.4□□□□□ -0.9
GGA3-223ENST00000621870 INSL6Q9Y581 213 aa9.4□□□□□ -0.9
GGA3-223ENST00000621870 CPQQ9Y646 472 aa9.4□□□□□ -0.9
GGA3-223ENST00000621870 TMEM191CA6NGB0 347 aa9.4□□□□□ -0.91
GGA3-223ENST00000621870 BTN3A1O00481 513 aa9.4□□□□□ -0.91
GGA3-223ENST00000621870 TPST1O60507 370 aa9.4□□□□□ -0.91
GGA3-223ENST00000621870 MTA2O94776 668 aa9.4□□□□□ -0.91
GGA3-223ENST00000621870 RPL22P35268 128 aaKnown RBP9.4□□□□□ -0.91
GGA3-223ENST00000621870 GPM6BQ13491 265 aa9.4□□□□□ -0.91
GGA3-223ENST00000621870 TAF5Q15542 800 aa9.4□□□□□ -0.91
GGA3-223ENST00000621870 CCDC85BQ15834 202 aaPredicted RBP9.4□□□□□ -0.91
GGA3-223ENST00000621870 PHKG1Q16816 387 aa9.4□□□□□ -0.91
GGA3-223ENST00000621870 PDPK2PQ6A1A2 396 aa9.4□□□□□ -0.91
GGA3-223ENST00000621870 DET1Q7L5Y6 550 aa9.4□□□□□ -0.91
GGA3-223ENST00000621870 CREG2Q8IUH2 290 aa9.4□□□□□ -0.91
GGA3-223ENST00000621870 KCNV2Q8TDN2 545 aa9.4□□□□□ -0.91
GGA3-223ENST00000621870 STOML1Q9UBI4 398 aa9.4□□□□□ -0.91
GGA3-223ENST00000621870 WARS2Q9UGM6 360 aaKnown RBP9.4□□□□□ -0.91
GGA3-223ENST00000621870 SRCAPQ6ZRS2 3230 aa9.4□□□□□ -0.91
GGA3-223ENST00000621870 SPTA1P02549 2419 aa9.4□□□□□ -0.91
GGA3-223ENST00000621870 F8W810 466 aa9.39□□□□□ -0.91
GGA3-223ENST00000621870 SYN3O14994 580 aa9.39□□□□□ -0.91
GGA3-223ENST00000621870 DAB1O75553 588 aa9.39□□□□□ -0.91
GGA3-223ENST00000621870 CATP04040 527 aaKnown RBP9.39□□□□□ -0.91
GGA3-223ENST00000621870 MAPK8P45983 427 aa9.39□□□□□ -0.91
GGA3-223ENST00000621870 SERPINB4P48594 390 aa9.39□□□□□ -0.91
GGA3-223ENST00000621870 ALDH9A1P49189 494 aa9.39□□□□□ -0.91
GGA3-223ENST00000621870 PRKCQQ04759 706 aa9.39□□□□□ -0.91
GGA3-223ENST00000621870 CACHD1Q5VU97 1274 aa9.39□□□□□ -0.91
GGA3-223ENST00000621870 FBXO39Q8N4B4 442 aa9.39□□□□□ -0.91
GGA3-223ENST00000621870 TRIML2Q8N7C3 387 aa9.39□□□□□ -0.91
GGA3-223ENST00000621870 PIK3R5Q8WYR1 880 aa9.39□□□□□ -0.91
GGA3-223ENST00000621870 TFAP2BQ92481 460 aa9.39□□□□□ -0.91
GGA3-223ENST00000621870 ALG3Q92685 438 aa9.39□□□□□ -0.91
GGA3-223ENST00000621870 CMTM5Q96DZ9 223 aa9.39□□□□□ -0.91
GGA3-223ENST00000621870 AHCYL2Q96HN2 611 aaKnown RBP9.39□□□□□ -0.91
GGA3-223ENST00000621870 HES6Q96HZ4 224 aa9.39□□□□□ -0.91
GGA3-223ENST00000621870 MBOAT7Q96N66 472 aa9.39□□□□□ -0.91
GGA3-223ENST00000621870 ECSITQ9BQ95 431 aa9.39□□□□□ -0.91
GGA3-223ENST00000621870 ZNF670Q9BS34 389 aa9.39□□□□□ -0.91
GGA3-223ENST00000621870 EPN3Q9H201 632 aa9.39□□□□□ -0.91
GGA3-223ENST00000621870 CDHR5Q9HBB8 845 aa9.39□□□□□ -0.91
GGA3-223ENST00000621870 ZNF446Q9NWS9 450 aa9.39□□□□□ -0.91
GGA3-223ENST00000621870 CLDND1Q9NY35 253 aa9.39□□□□□ -0.91
GGA3-223ENST00000621870 SLC24A2Q9UI40 661 aa9.39□□□□□ -0.91
GGA3-223ENST00000621870 A0A0U1RQF3 1178 aa9.39□□□□□ -0.91
GGA3-223ENST00000621870 KLHL2O95198 593 aa9.39□□□□□ -0.91
GGA3-223ENST00000621870 UGT2B4P06133 528 aa9.39□□□□□ -0.91
GGA3-223ENST00000621870 PTPN3P26045 913 aa9.39□□□□□ -0.91
GGA3-223ENST00000621870 IRAK1P51617 712 aa9.39□□□□□ -0.91
GGA3-223ENST00000621870 LRRC36Q1X8D7 754 aa9.39□□□□□ -0.91
GGA3-223ENST00000621870 LINGO4Q6UY18 593 aa9.39□□□□□ -0.91
GGA3-223ENST00000621870 STRADAQ7RTN6 431 aa9.39□□□□□ -0.91
GGA3-223ENST00000621870 SLC4A11Q8NBS3 891 aa9.39□□□□□ -0.91
GGA3-223ENST00000621870 WDR48Q8TAF3 677 aa9.39□□□□□ -0.91
GGA3-223ENST00000621870 TSEN34Q9BSV6 310 aaKnown RBP9.39□□□□□ -0.91
GGA3-223ENST00000621870 PCDH18Q9HCL0 1135 aa9.39□□□□□ -0.91
GGA3-223ENST00000621870 TBC1D14Q9P2M4 693 aa9.39□□□□□ -0.91
GGA3-223ENST00000621870 NDRG2Q9UN36 371 aaKnown RBP9.39□□□□□ -0.91
GGA3-223ENST00000621870 CHKBQ9Y259 395 aa9.39□□□□□ -0.91
GGA3-223ENST00000621870 EIF3LQ9Y262 564 aaKnown RBP9.39□□□□□ -0.91
GGA3-223ENST00000621870 GVINP1Q7Z2Y8 2422 aa9.39□□□□□ -0.91
GGA3-223ENST00000621870 A0A1W2PQ45 241 aaPredicted RBP9.39□□□□□ -0.91
GGA3-223ENST00000621870 A0A1W2PQY0 241 aa9.39□□□□□ -0.91
GGA3-223ENST00000621870 ZBTB14O43829 449 aa9.39□□□□□ -0.91
GGA3-223ENST00000621870 CLDN11O75508 207 aa9.39□□□□□ -0.91
GGA3-223ENST00000621870 STBD1O95210 358 aa9.39□□□□□ -0.91
GGA3-223ENST00000621870 EPHX1P07099 455 aa9.39□□□□□ -0.91
GGA3-223ENST00000621870 GJA1P17302 382 aa9.39□□□□□ -0.91
GGA3-223ENST00000621870 TYMPP19971 482 aa9.39□□□□□ -0.91
GGA3-223ENST00000621870 CYP2A7P20853 494 aa9.39□□□□□ -0.91
GGA3-223ENST00000621870 CCNG1P51959 295 aa9.39□□□□□ -0.91
GGA3-223ENST00000621870 WNT3AP56704 352 aa9.39□□□□□ -0.91
GGA3-223ENST00000621870 CDK16Q00536 496 aa9.39□□□□□ -0.91
GGA3-223ENST00000621870 PTPRNQ16849 979 aa9.39□□□□□ -0.91
GGA3-223ENST00000621870 KBTBD12Q3ZCT8 623 aa9.39□□□□□ -0.91
GGA3-223ENST00000621870 N4BP2L1Q5TBK1 243 aaPredicted RBP9.39□□□□□ -0.91
GGA3-223ENST00000621870 SCAMP5Q8TAC9 235 aa9.39□□□□□ -0.91
GGA3-223ENST00000621870 ZNF473Q8WTR7 871 aaKnown RBP9.39□□□□□ -0.91
GGA3-223ENST00000621870 NR1H4Q96RI1 486 aaPredicted RBP9.39□□□□□ -0.91
GGA3-223ENST00000621870 IL22Q9GZX6 179 aa9.39□□□□□ -0.91
GGA3-223ENST00000621870 LHX5Q9H2C1 402 aa9.39□□□□□ -0.91
GGA3-223ENST00000621870 APOBEC3GQ9HC16 384 aaKnown RBP9.39□□□□□ -0.91
GGA3-223ENST00000621870 ARL15Q9NXU5 204 aa9.39□□□□□ -0.91
GGA3-223ENST00000621870 APPL1Q9UKG1 709 aa9.39□□□□□ -0.91
GGA3-223ENST00000621870 TRPC5OSA6NMA1 111 aa9.38□□□□□ -0.91
GGA3-223ENST00000621870 MYO1GB0I1T2 1018 aa9.38□□□□□ -0.91
GGA3-223ENST00000621870 PDE2AO00408 941 aaPredicted RBP9.38□□□□□ -0.91
GGA3-223ENST00000621870 EIF3HO15372 352 aaKnown RBP eCLIP9.38□□□□□ -0.914e-7■■■■□ 20.1
GGA3-223ENST00000621870 DNTTP04053 509 aa9.38□□□□□ -0.91
GGA3-223ENST00000621870 PTPN2P17706 415 aa9.38□□□□□ -0.91
GGA3-223ENST00000621870 PGAM1P18669 254 aa9.38□□□□□ -0.91
GGA3-223ENST00000621870 INPP1P49441 399 aa9.38□□□□□ -0.91
GGA3-223ENST00000621870 GBE1Q04446 702 aa9.38□□□□□ -0.91
GGA3-223ENST00000621870 CDK18Q07002 472 aa9.38□□□□□ -0.91
GGA3-223ENST00000621870 TP53BP2Q13625 1128 aa9.38□□□□□ -0.91
GGA3-223ENST00000621870 CNGA3Q16281 694 aa9.38□□□□□ -0.91
GGA3-223ENST00000621870 ANKS6Q68DC2 871 aa9.38□□□□□ -0.91
GGA3-223ENST00000621870 UNC5AQ6ZN44 842 aa9.38□□□□□ -0.91
GGA3-223ENST00000621870 MTSS1LQ765P7 747 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms