RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 SP3Q02447 781 aa7.28□□□□□ -1.24
COLCA1-205ENST00000620864 CBFBQ13951 182 aa7.28□□□□□ -1.24
COLCA1-205ENST00000620864 INSCQ1MX18 579 aa7.28□□□□□ -1.24
COLCA1-205ENST00000620864 SPANXN3Q5MJ09 141 aa7.28□□□□□ -1.24
COLCA1-205ENST00000620864 BHLHB9Q6PI77 547 aa7.28□□□□□ -1.24
COLCA1-205ENST00000620864 XKRXQ6PP77 449 aa7.28□□□□□ -1.24
COLCA1-205ENST00000620864 C11orf96Q7Z7L8 435 aa7.28□□□□□ -1.24
COLCA1-205ENST00000620864 OR56A4Q8NGH8 313 aa7.28□□□□□ -1.24
COLCA1-205ENST00000620864 OR2W6PQ8NHA6 318 aa7.28□□□□□ -1.24
COLCA1-205ENST00000620864 C15orf40Q8WUR7 153 aa7.28□□□□□ -1.24
COLCA1-205ENST00000620864 PIK3C2BO00750 1634 aa7.28□□□□□ -1.24
COLCA1-205ENST00000620864 KCNH1O95259 989 aa7.28□□□□□ -1.24
COLCA1-205ENST00000620864 CYP2E1P05181 493 aaPredicted RBP7.28□□□□□ -1.24
COLCA1-205ENST00000620864 C6P13671 934 aa7.28□□□□□ -1.24
COLCA1-205ENST00000620864 PRKAR2AP13861 404 aaKnown RBP7.28□□□□□ -1.24
COLCA1-205ENST00000620864 PIK3CBP42338 1070 aa7.28□□□□□ -1.24
COLCA1-205ENST00000620864 RGS1Q08116 209 aa7.28□□□□□ -1.24
COLCA1-205ENST00000620864 TRMT2AQ8IZ69 625 aaKnown RBP7.28□□□□□ -1.24
COLCA1-205ENST00000620864 NLGN2Q8NFZ4 835 aa7.28□□□□□ -1.24
COLCA1-205ENST00000620864 RP9Q8TA86 221 aaKnown RBP7.28□□□□□ -1.24
COLCA1-205ENST00000620864 CLPBQ9H078 707 aa7.28□□□□□ -1.24
COLCA1-205ENST00000620864 MAGEE1Q9HCI5 957 aa7.28□□□□□ -1.24
COLCA1-205ENST00000620864 A1CFQ9NQ94 594 aaKnown RBP7.28□□□□□ -1.24
COLCA1-205ENST00000620864 TRIM10Q9UDY6 481 aa7.28□□□□□ -1.24
COLCA1-205ENST00000620864 RGS14O43566 566 aa7.28□□□□□ -1.24
COLCA1-205ENST00000620864 NRG3P56975 720 aa7.28□□□□□ -1.24
COLCA1-205ENST00000620864 PTPN21Q16825 1174 aa7.28□□□□□ -1.24
COLCA1-205ENST00000620864 FBXW8Q8N3Y1 598 aa7.28□□□□□ -1.24
COLCA1-205ENST00000620864 TMEM169Q96HH4 297 aa7.28□□□□□ -1.24
COLCA1-205ENST00000620864 LXNQ9BS40 222 aa7.28□□□□□ -1.24
COLCA1-205ENST00000620864 BCL2L14Q9BZR8 327 aa7.28□□□□□ -1.24
COLCA1-205ENST00000620864 MED28Q9H204 178 aa7.28□□□□□ -1.24
COLCA1-205ENST00000620864 PCDH9Q9HC56 1237 aa7.28□□□□□ -1.24
COLCA1-205ENST00000620864 RAB21Q9UL25 225 aa7.28□□□□□ -1.24
COLCA1-205ENST00000620864 SIK3Q9Y2K2 1263 aa7.28□□□□□ -1.24
COLCA1-205ENST00000620864 MEMO1Q9Y316 297 aa7.28□□□□□ -1.24
COLCA1-205ENST00000620864 TNPO3Q9Y5L0 923 aaKnown RBP7.28□□□□□ -1.24
COLCA1-205ENST00000620864 PPP2R3BQ9Y5P8 575 aa7.28□□□□□ -1.24
COLCA1-205ENST00000620864 GLI2P10070 1586 aa7.28□□□□□ -1.24
COLCA1-205ENST00000620864 GNG14A0A1W2PPG7 69 aa7.28□□□□□ -1.24
COLCA1-205ENST00000620864 PLSCR1O15162 318 aa7.28□□□□□ -1.24
COLCA1-205ENST00000620864 SPTLC1O15269 473 aa7.28□□□□□ -1.24
COLCA1-205ENST00000620864 RNASEH1O60930 286 aaKnown RBP7.28□□□□□ -1.24
COLCA1-205ENST00000620864 GATBO75879 557 aaKnown RBP7.28□□□□□ -1.24
COLCA1-205ENST00000620864 EPN2O95208 641 aa7.28□□□□□ -1.24
COLCA1-205ENST00000620864 SERPINF2P08697 491 aa7.28□□□□□ -1.24
COLCA1-205ENST00000620864 ERFP50548 548 aa7.28□□□□□ -1.24
COLCA1-205ENST00000620864 CASP6P55212 293 aa7.28□□□□□ -1.24
COLCA1-205ENST00000620864 CYP24A1Q07973 514 aa7.28□□□□□ -1.24
COLCA1-205ENST00000620864 RIPK1Q13546 671 aa7.28□□□□□ -1.24
COLCA1-205ENST00000620864 PARP6Q2NL67 630 aa7.28□□□□□ -1.24
COLCA1-205ENST00000620864 C15orf59Q2T9L4 293 aaPredicted RBP7.28□□□□□ -1.24
COLCA1-205ENST00000620864 MGAT5BQ3V5L5 792 aa7.28□□□□□ -1.24
COLCA1-205ENST00000620864 PDCD4Q53EL6 469 aaKnown RBP7.28□□□□□ -1.24
COLCA1-205ENST00000620864 ACAD10Q6JQN1 1059 aa7.28□□□□□ -1.24
COLCA1-205ENST00000620864 EMC1Q8N766 993 aa7.28□□□□□ -1.24
COLCA1-205ENST00000620864 ATP6V0D2Q8N8Y2 350 aa7.28□□□□□ -1.24
COLCA1-205ENST00000620864 SPPL2AQ8TCT8 520 aa7.28□□□□□ -1.24
COLCA1-205ENST00000620864 HM13Q8TCT9 377 aa7.28□□□□□ -1.24
COLCA1-205ENST00000620864 RNF145Q96MT1 663 aa7.28□□□□□ -1.24
COLCA1-205ENST00000620864 CINPQ9BW66 212 aaPredicted RBP7.28□□□□□ -1.24
COLCA1-205ENST00000620864 ABCG4Q9H172 646 aa7.28□□□□□ -1.24
COLCA1-205ENST00000620864 RAB26Q9ULW5 256 aa7.28□□□□□ -1.24
COLCA1-205ENST00000620864 LAMC1P11047 1609 aa7.28□□□□□ -1.24
COLCA1-205ENST00000620864 MRASO14807 208 aa7.28□□□□□ -1.24
COLCA1-205ENST00000620864 NR2C2P49116 596 aa7.28□□□□□ -1.24
COLCA1-205ENST00000620864 SGO1Q5FBB7 561 aa7.28□□□□□ -1.24
COLCA1-205ENST00000620864 IER5Q5VY09 327 aa7.28□□□□□ -1.24
COLCA1-205ENST00000620864 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.28□□□□□ -1.24
COLCA1-205ENST00000620864 MAGEE2Q8TD90 523 aaPredicted RBP7.28□□□□□ -1.24
COLCA1-205ENST00000620864 AGAP3Q96P47 875 aa7.28□□□□□ -1.24
COLCA1-205ENST00000620864 CDK5RAP1Q96SZ6 601 aaKnown RBP7.28□□□□□ -1.24
COLCA1-205ENST00000620864 UHRF1Q96T88 793 aaPredicted RBP7.28□□□□□ -1.24
COLCA1-205ENST00000620864 ADGRE3Q9BY15 652 aa7.28□□□□□ -1.24
COLCA1-205ENST00000620864 OXCT2Q9BYC2 517 aaPredicted RBP7.28□□□□□ -1.24
COLCA1-205ENST00000620864 ORC5O43913 435 aa7.27□□□□□ -1.24
COLCA1-205ENST00000620864 UGT2B11O75310 529 aa7.27□□□□□ -1.24
COLCA1-205ENST00000620864 KRT36O76013 467 aa7.27□□□□□ -1.24
COLCA1-205ENST00000620864 LCP1P13796 627 aa7.27□□□□□ -1.24
COLCA1-205ENST00000620864 CBX3Q13185 183 aa7.27□□□□□ -1.24
COLCA1-205ENST00000620864 MPP2Q14168 576 aa7.27□□□□□ -1.24
COLCA1-205ENST00000620864 SQLEQ14534 574 aa7.27□□□□□ -1.24
COLCA1-205ENST00000620864 RIPOR1Q6ZS17 1223 aa7.27□□□□□ -1.24
COLCA1-205ENST00000620864 CD302Q8IX05 232 aa7.27□□□□□ -1.24
COLCA1-205ENST00000620864 GALNT6Q8NCL4 622 aa7.27□□□□□ -1.24
COLCA1-205ENST00000620864 FBXO36Q8NEA4 188 aa7.27□□□□□ -1.24
COLCA1-205ENST00000620864 UCMAQ8WVF2 138 aa7.27□□□□□ -1.24
COLCA1-205ENST00000620864 RIN2Q8WYP3 895 aaPredicted RBP7.27□□□□□ -1.24
COLCA1-205ENST00000620864 FIG4Q92562 907 aa7.27□□□□□ -1.24
COLCA1-205ENST00000620864 NDNQ99608 321 aa7.27□□□□□ -1.24
COLCA1-205ENST00000620864 FAM49BQ9NUQ9 324 aa7.27□□□□□ -1.24
COLCA1-205ENST00000620864 SPEF1Q9Y4P9 236 aa7.27□□□□□ -1.24
COLCA1-205ENST00000620864 TELO2Q9Y4R8 837 aa7.27□□□□□ -1.24
COLCA1-205ENST00000620864 PEX16Q9Y5Y5 336 aa7.27□□□□□ -1.24
COLCA1-205ENST00000620864 CDK12Q9NYV4 1490 aaPredicted RBP7.27□□□□□ -1.25
COLCA1-205ENST00000620864 LOC100506127A0A0U1RQW1 187 aa7.27□□□□□ -1.25
COLCA1-205ENST00000620864 MPZL2O60487 215 aa7.27□□□□□ -1.25
COLCA1-205ENST00000620864 MED24O75448 989 aa7.27□□□□□ -1.25
COLCA1-205ENST00000620864 CYP2A7P20853 494 aa7.27□□□□□ -1.25
COLCA1-205ENST00000620864 PPIBP23284 216 aaKnown RBP7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms