RNA–Protein interactions for RNA: ENST00000620277.4

DKC1-213, Transcript of dyskerin pseudouridine synthase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DKC1, Length 3,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DKC1-213ENST00000620277 ITGA11Q9UKX5 1188 aa16.35■□□□□ 0.21
DKC1-213ENST00000620277 MTF2Q9Y483 593 aaPredicted RBP16.35■□□□□ 0.21
DKC1-213ENST00000620277 AP4B1Q9Y6B7 739 aa16.35■□□□□ 0.21
DKC1-213ENST00000620277 TTC24A2A3L6 582 aaPredicted RBP16.35■□□□□ 0.21
DKC1-213ENST00000620277 C9IYK1 514 aa16.35■□□□□ 0.21
DKC1-213ENST00000620277 I6L893 689 aaPredicted RBP16.35■□□□□ 0.21
DKC1-213ENST00000620277 PMPCBO75439 489 aa16.35■□□□□ 0.21
DKC1-213ENST00000620277 CLPTM1O96005 669 aa16.35■□□□□ 0.21
DKC1-213ENST00000620277 USP17L7P0C7H9 530 aa16.35■□□□□ 0.21
DKC1-213ENST00000620277 RXRBP28702 533 aa16.35■□□□□ 0.21
DKC1-213ENST00000620277 SPRP35270 261 aaPredicted RBP16.35■□□□□ 0.21
DKC1-213ENST00000620277 CHN2P52757 468 aa16.35■□□□□ 0.21
DKC1-213ENST00000620277 GJA9P57773 515 aa16.35■□□□□ 0.21
DKC1-213ENST00000620277 CDKL1Q00532 357 aa16.35■□□□□ 0.21
DKC1-213ENST00000620277 INCA1Q0VD86 236 aa16.35■□□□□ 0.21
DKC1-213ENST00000620277 ZBTB17Q13105 803 aa16.35■□□□□ 0.21
DKC1-213ENST00000620277 CEACAM7Q14002 265 aa16.35■□□□□ 0.21
DKC1-213ENST00000620277 PRAMEF19Q5SWL8 479 aa16.35■□□□□ 0.21
DKC1-213ENST00000620277 ARHGAP36Q6ZRI8 547 aa16.35■□□□□ 0.21
DKC1-213ENST00000620277 LILRA2Q8N149 483 aa16.35■□□□□ 0.21
DKC1-213ENST00000620277 SIX6OS1Q8N1H7 587 aa16.35■□□□□ 0.21
DKC1-213ENST00000620277 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.35■□□□□ 0.217e-9■■■■□ 21.3
DKC1-213ENST00000620277 PPWD1Q96BP3 646 aaKnown RBP16.35■□□□□ 0.21
DKC1-213ENST00000620277 G3V2L1 256 aa16.34■□□□□ 0.21
DKC1-213ENST00000620277 FOXD2O60548 495 aaPredicted RBP16.34■□□□□ 0.21
DKC1-213ENST00000620277 TFEBP19484 476 aa16.34■□□□□ 0.21
DKC1-213ENST00000620277 EDNRBP24530 442 aa16.34■□□□□ 0.21
DKC1-213ENST00000620277 FDFT1P37268 417 aa16.34■□□□□ 0.21
DKC1-213ENST00000620277 SOX4Q06945 474 aaPredicted RBP16.34■□□□□ 0.21
DKC1-213ENST00000620277 BST2Q10589 180 aaKnown RBP16.34■□□□□ 0.21
DKC1-213ENST00000620277 GSTA3Q16772 222 aa16.34■□□□□ 0.21
DKC1-213ENST00000620277 ANKRD20A4Q4UJ75 823 aa16.34■□□□□ 0.21
DKC1-213ENST00000620277 ARMCX2Q7L311 632 aa16.34■□□□□ 0.21
DKC1-213ENST00000620277 NT5DC4Q86YG4 428 aa16.34■□□□□ 0.21
DKC1-213ENST00000620277 PQLC1Q8N2U9 271 aa16.34■□□□□ 0.21
DKC1-213ENST00000620277 RYBPQ8N488 228 aaPredicted RBP16.34■□□□□ 0.21
DKC1-213ENST00000620277 FAM110BQ8TC76 370 aa16.34■□□□□ 0.21
DKC1-213ENST00000620277 HIC2Q96JB3 615 aa16.34■□□□□ 0.21
DKC1-213ENST00000620277 DDIT4Q9NX09 232 aa16.34■□□□□ 0.21
DKC1-213ENST00000620277 POLR2AP24928 1970 aaKnown RBP16.34■□□□□ 0.21
DKC1-213ENST00000620277 ZNF638Q14966 1978 aaKnown RBP16.34■□□□□ 0.21
DKC1-213ENST00000620277 MEIS3P2A8K0S8 358 aa16.34■□□□□ 0.21
DKC1-213ENST00000620277 KCNU1A8MYU2 1149 aa16.34■□□□□ 0.21
DKC1-213ENST00000620277 AURKAO14965 403 aa16.34■□□□□ 0.21
DKC1-213ENST00000620277 PTPN1P18031 435 aaKnown RBP16.34■□□□□ 0.21
DKC1-213ENST00000620277 COG7P83436 770 aa16.34■□□□□ 0.21
DKC1-213ENST00000620277 DGKDQ16760 1214 aa16.34■□□□□ 0.21
DKC1-213ENST00000620277 CMPK2Q5EBM0 449 aa16.34■□□□□ 0.21
DKC1-213ENST00000620277 FSCBQ5H9T9 825 aa16.34■□□□□ 0.21
DKC1-213ENST00000620277 SEL1L3Q68CR1 1132 aa16.34■□□□□ 0.21
DKC1-213ENST00000620277 PLPPR4Q7Z2D5 763 aa16.34■□□□□ 0.21
DKC1-213ENST00000620277 SNRNP27Q8WVK2 155 aaKnown RBP16.34■□□□□ 0.21
DKC1-213ENST00000620277 NXNL1Q96CM4 212 aa16.34■□□□□ 0.21
DKC1-213ENST00000620277 SLC2A6Q9UGQ3 507 aa16.34■□□□□ 0.21
DKC1-213ENST00000620277 GNEQ9Y223 722 aaKnown RBP16.34■□□□□ 0.21
DKC1-213ENST00000620277 PHIPQ8WWQ0 1821 aa16.34■□□□□ 0.21
DKC1-213ENST00000620277 CCNT2O60583 730 aaKnown RBP16.34■□□□□ 0.21
DKC1-213ENST00000620277 CRTAMO95727 393 aa16.34■□□□□ 0.21
DKC1-213ENST00000620277 GRK2P25098 689 aa16.34■□□□□ 0.21
DKC1-213ENST00000620277 EPHX2P34913 555 aa16.34■□□□□ 0.21
DKC1-213ENST00000620277 AFF1P51825 1210 aaKnown RBP16.34■□□□□ 0.21
DKC1-213ENST00000620277 TKTL1P51854 596 aa16.34■□□□□ 0.21
DKC1-213ENST00000620277 TPI1P60174 286 aa16.34■□□□□ 0.21
DKC1-213ENST00000620277 CYLC2Q14093 348 aaPredicted RBP16.34■□□□□ 0.21
DKC1-213ENST00000620277 NADK2Q4G0N4 442 aa16.34■□□□□ 0.21
DKC1-213ENST00000620277 HASPINQ8TF76 798 aa16.34■□□□□ 0.21
DKC1-213ENST00000620277 EZH1Q92800 747 aaPredicted RBP16.34■□□□□ 0.21
DKC1-213ENST00000620277 EMID1Q96A84 441 aaPredicted RBP16.34■□□□□ 0.21
DKC1-213ENST00000620277 FRMD8Q9BZ67 464 aaPredicted RBP16.34■□□□□ 0.21
DKC1-213ENST00000620277 GPAMQ9HCL2 828 aa16.34■□□□□ 0.21
DKC1-213ENST00000620277 DDX43Q9NXZ2 648 aaKnown RBP16.34■□□□□ 0.21
DKC1-213ENST00000620277 CDY2AQ9Y6F7 541 aa16.34■□□□□ 0.21
DKC1-213ENST00000620277 CDY1Q9Y6F8 540 aa16.34■□□□□ 0.21
DKC1-213ENST00000620277 ZNF646O15015 1829 aaPredicted RBP16.33■□□□□ 0.21
DKC1-213ENST00000620277 SHROOM3Q8TF72 1996 aa16.33■□□□□ 0.21
DKC1-213ENST00000620277 YJEFN3A6XGL0 299 aa16.33■□□□□ 0.21
DKC1-213ENST00000620277 KPNA7A9QM74 516 aa16.33■□□□□ 0.21
DKC1-213ENST00000620277 PTPN3P26045 913 aa16.33■□□□□ 0.21
DKC1-213ENST00000620277 CACNB2Q08289 660 aaPredicted RBP16.33■□□□□ 0.21
DKC1-213ENST00000620277 PPP1R3AQ16821 1122 aa16.33■□□□□ 0.21
DKC1-213ENST00000620277 FBXO47Q5MNV8 452 aa16.33■□□□□ 0.21
DKC1-213ENST00000620277 SH2D4BQ5SQS7 431 aa16.33■□□□□ 0.21
DKC1-213ENST00000620277 WSCD1Q658N2 575 aa16.33■□□□□ 0.21
DKC1-213ENST00000620277 PGM2L1Q6PCE3 622 aa16.33■□□□□ 0.21
DKC1-213ENST00000620277 EPGNQ6UW88 154 aa16.33■□□□□ 0.21
DKC1-213ENST00000620277 BNC2Q6ZN30 1099 aaPredicted RBP16.33■□□□□ 0.21
DKC1-213ENST00000620277 KYQ8NBH2 561 aa16.33■□□□□ 0.21
DKC1-213ENST00000620277 OR9I1Q8NGQ6 314 aa16.33■□□□□ 0.21
DKC1-213ENST00000620277 RBBP8Q99708 897 aa16.33■□□□□ 0.21
DKC1-213ENST00000620277 GCOM2Q9BZD3 368 aaPredicted RBP16.33■□□□□ 0.21
DKC1-213ENST00000620277 WDR41Q9HAD4 459 aa16.33■□□□□ 0.21
DKC1-213ENST00000620277 XPR1Q9UBH6 696 aa16.33■□□□□ 0.21
DKC1-213ENST00000620277 MORF4L1Q9UBU8 362 aa16.33■□□□□ 0.21
DKC1-213ENST00000620277 GIMAP2Q9UG22 337 aa16.33■□□□□ 0.21
DKC1-213ENST00000620277 FZD10Q9ULW2 581 aa16.33■□□□□ 0.21
DKC1-213ENST00000620277 INHBCP55103 352 aa16.33■□□□□ 0.2
DKC1-213ENST00000620277 PKDCCQ504Y2 493 aa16.33■□□□□ 0.2
DKC1-213ENST00000620277 ARHGAP17Q68EM7 881 aa16.33■□□□□ 0.2
DKC1-213ENST00000620277 MYO1HQ8N1T3 1032 aa16.33■□□□□ 0.2
DKC1-213ENST00000620277 RAB3IL1Q8TBN0 382 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms