RNA–Protein interactions for RNA: ENST00000618262.4

SRRT-216, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRRT, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-216ENST00000618262 TJP3O95049 919 aa12.33□□□□□ -0.44
SRRT-216ENST00000618262 OR1D2P34982 312 aa12.33□□□□□ -0.44
SRRT-216ENST00000618262 DNA2P51530 1060 aa12.33□□□□□ -0.44
SRRT-216ENST00000618262 RNASE9P60153 205 aaKnown RBP12.33□□□□□ -0.44
SRRT-216ENST00000618262 ACY1Q03154 408 aa12.33□□□□□ -0.44
SRRT-216ENST00000618262 CSTF3Q12996 717 aaKnown RBP12.33□□□□□ -0.44
SRRT-216ENST00000618262 RFTN1Q14699 578 aaPredicted RBP12.33□□□□□ -0.44
SRRT-216ENST00000618262 FBXO43Q4G163 708 aa12.33□□□□□ -0.44
SRRT-216ENST00000618262 CLVS2Q5SYC1 327 aa12.33□□□□□ -0.44
SRRT-216ENST00000618262 CYP4A22Q5TCH4 519 aa12.33□□□□□ -0.44
SRRT-216ENST00000618262 ZNF697Q5TEC3 545 aa12.33□□□□□ -0.44
SRRT-216ENST00000618262 TMEM139Q8IV31 216 aa12.33□□□□□ -0.44
SRRT-216ENST00000618262 SCN4BQ8IWT1 228 aa12.33□□□□□ -0.44
SRRT-216ENST00000618262 FAM71AQ8IYT1 594 aa12.33□□□□□ -0.44
SRRT-216ENST00000618262 ZNF606Q8WXB4 792 aa12.33□□□□□ -0.44
SRRT-216ENST00000618262 RTP3Q9BQQ7 232 aa12.33□□□□□ -0.44
SRRT-216ENST00000618262 NT5C1AQ9BXI3 368 aa12.33□□□□□ -0.44
SRRT-216ENST00000618262 MTIF3Q9H2K0 278 aaKnown RBP12.33□□□□□ -0.44
SRRT-216ENST00000618262 PALMDQ9NP74 551 aa12.33□□□□□ -0.44
SRRT-216ENST00000618262 CRTAC1Q9NQ79 661 aa12.33□□□□□ -0.44
SRRT-216ENST00000618262 TMEM30AQ9NV96 361 aa12.33□□□□□ -0.44
SRRT-216ENST00000618262 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.32□□□□□ -0.44
SRRT-216ENST00000618262 M0QYV0 167 aa12.32□□□□□ -0.44
SRRT-216ENST00000618262 ZNF263O14978 683 aa12.32□□□□□ -0.44
SRRT-216ENST00000618262 GRM6O15303 877 aa12.32□□□□□ -0.44
SRRT-216ENST00000618262 ODC1P11926 461 aa12.32□□□□□ -0.44
SRRT-216ENST00000618262 CYP3A5P20815 502 aa12.32□□□□□ -0.44
SRRT-216ENST00000618262 CYP2F1P24903 491 aa12.32□□□□□ -0.44
SRRT-216ENST00000618262 MRPS5P82675 430 aaKnown RBP12.32□□□□□ -0.44
SRRT-216ENST00000618262 GRAMD1BQ3KR37 738 aa12.32□□□□□ -0.44
SRRT-216ENST00000618262 RBM20Q5T481 1227 aaKnown RBP12.32□□□□□ -0.44
SRRT-216ENST00000618262 FCRLBQ6BAA4 426 aa12.32□□□□□ -0.44
SRRT-216ENST00000618262 METTL2BQ6P1Q9 378 aaKnown RBP12.32□□□□□ -0.44
SRRT-216ENST00000618262 DENND1BQ6P3S1 775 aa12.32□□□□□ -0.44
SRRT-216ENST00000618262 CRTC1Q6UUV9 634 aa12.32□□□□□ -0.44
SRRT-216ENST00000618262 Q6ZNX1 250 aa12.32□□□□□ -0.44
SRRT-216ENST00000618262 PJA1Q8NG27 643 aa12.32□□□□□ -0.44
SRRT-216ENST00000618262 LNX1Q8TBB1 728 aaPredicted RBP12.32□□□□□ -0.44
SRRT-216ENST00000618262 HCAR2Q8TDS4 363 aa12.32□□□□□ -0.44
SRRT-216ENST00000618262 NAT14Q8WUY8 206 aa12.32□□□□□ -0.44
SRRT-216ENST00000618262 PIP5K1AQ99755 562 aa12.32□□□□□ -0.44
SRRT-216ENST00000618262 COQ7Q99807 217 aa12.32□□□□□ -0.44
SRRT-216ENST00000618262 ZNF518BQ9C0D4 1074 aa12.32□□□□□ -0.44
SRRT-216ENST00000618262 TIMMDC1Q9NPL8 285 aa12.32□□□□□ -0.44
SRRT-216ENST00000618262 PCDHB12Q9Y5F1 795 aa12.32□□□□□ -0.44
SRRT-216ENST00000618262 EPOPA6NHQ4 379 aa12.32□□□□□ -0.44
SRRT-216ENST00000618262 RETP07949 1114 aa12.32□□□□□ -0.44
SRRT-216ENST00000618262 TBXAS1P24557 533 aaPredicted RBP12.32□□□□□ -0.44
SRRT-216ENST00000618262 DHX9Q08211 1270 aaKnown RBP12.32□□□□□ -0.44
SRRT-216ENST00000618262 QPCTQ16769 361 aa12.32□□□□□ -0.44
SRRT-216ENST00000618262 KLHL35Q6PF15 583 aa12.32□□□□□ -0.44
SRRT-216ENST00000618262 ARFGAP2Q8N6H7 521 aa12.32□□□□□ -0.44
SRRT-216ENST00000618262 PCED1BQ96HM7 432 aa12.32□□□□□ -0.44
SRRT-216ENST00000618262 METTL2AQ96IZ6 378 aaKnown RBP12.32□□□□□ -0.44
SRRT-216ENST00000618262 DNAJC7Q99615 494 aa12.32□□□□□ -0.44
SRRT-216ENST00000618262 BCO2Q9BYV7 579 aa12.32□□□□□ -0.44
SRRT-216ENST00000618262 GOLPH3Q9H4A6 298 aa12.32□□□□□ -0.44
SRRT-216ENST00000618262 SLC28A3Q9HAS3 691 aa12.32□□□□□ -0.44
SRRT-216ENST00000618262 RC3H2Q9HBD1 1191 aaKnown RBP12.32□□□□□ -0.44
SRRT-216ENST00000618262 WDR6Q9NNW5 1121 aaKnown RBP12.32□□□□□ -0.44
SRRT-216ENST00000618262 ENTPD7Q9NQZ7 604 aa12.32□□□□□ -0.44
SRRT-216ENST00000618262 GID8Q9NWU2 228 aa12.32□□□□□ -0.44
SRRT-216ENST00000618262 TSPAN16Q9UKR8 245 aa12.32□□□□□ -0.44
SRRT-216ENST00000618262 SOX13Q9UN79 622 aa12.32□□□□□ -0.44
SRRT-216ENST00000618262 PCDHGA3Q9Y5H0 932 aa12.32□□□□□ -0.44
SRRT-216ENST00000618262 SF3B1O75533 1304 aaKnown RBP eCLIP12.31□□□□□ -0.442e-6■■■■■ 28.4
SRRT-216ENST00000618262 PRRC2BQ5JSZ5 2229 aaKnown RBP12.31□□□□□ -0.44
SRRT-216ENST00000618262 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.31□□□□□ -0.44
SRRT-216ENST00000618262 TOR1BO14657 336 aa12.31□□□□□ -0.44
SRRT-216ENST00000618262 RASGRP1O95267 797 aa12.31□□□□□ -0.44
SRRT-216ENST00000618262 PRLP01236 227 aa12.31□□□□□ -0.44
SRRT-216ENST00000618262 TRIM23P36406 574 aa12.31□□□□□ -0.44
SRRT-216ENST00000618262 PNPLA4P41247 253 aa12.31□□□□□ -0.44
SRRT-216ENST00000618262 LIMK1P53667 647 aa12.31□□□□□ -0.44
SRRT-216ENST00000618262 EMP3P54852 163 aa12.31□□□□□ -0.44
SRRT-216ENST00000618262 KCNJ2P63252 427 aa12.31□□□□□ -0.44
SRRT-216ENST00000618262 OLR1P78380 273 aa12.31□□□□□ -0.44
SRRT-216ENST00000618262 MAPRE2Q15555 327 aa12.31□□□□□ -0.44
SRRT-216ENST00000618262 DDR2Q16832 855 aa12.31□□□□□ -0.44
SRRT-216ENST00000618262 GOLGA7BQ2TAP0 167 aa12.31□□□□□ -0.44
SRRT-216ENST00000618262 SPDYAQ5MJ70 313 aa12.31□□□□□ -0.44
SRRT-216ENST00000618262 CCNI2Q6ZMN8 369 aaPredicted RBP12.31□□□□□ -0.44
SRRT-216ENST00000618262 DBX2Q6ZNG2 339 aa12.31□□□□□ -0.44
SRRT-216ENST00000618262 ARHGAP36Q6ZRI8 547 aa12.31□□□□□ -0.44
SRRT-216ENST00000618262 ANKS4BQ8N8V4 417 aa12.31□□□□□ -0.44
SRRT-216ENST00000618262 B3GALNT2Q8NCR0 500 aa12.31□□□□□ -0.44
SRRT-216ENST00000618262 POF1BQ8WVV4 589 aa12.31□□□□□ -0.44
SRRT-216ENST00000618262 SEPT5Q99719 369 aaPredicted RBP12.31□□□□□ -0.44
SRRT-216ENST00000618262 TCF25Q9BQ70 676 aa12.31□□□□□ -0.44
SRRT-216ENST00000618262 B3GNT5Q9BYG0 378 aa12.31□□□□□ -0.44
SRRT-216ENST00000618262 DDX3XO00571 662 aaKnown RBP eCLIP12.31□□□□□ -0.444e-10■■■□□ 16.4
SRRT-216ENST00000618262 APOL1O14791 398 aa12.31□□□□□ -0.44
SRRT-216ENST00000618262 FKBP9O95302 570 aa12.31□□□□□ -0.44
SRRT-216ENST00000618262 CYP1A1P04798 512 aaPredicted RBP12.31□□□□□ -0.44
SRRT-216ENST00000618262 CHRNB2P17787 502 aa12.31□□□□□ -0.44
SRRT-216ENST00000618262 PHBP35232 272 aa12.31□□□□□ -0.44
SRRT-216ENST00000618262 ATP6V1E1P36543 226 aa12.31□□□□□ -0.44
SRRT-216ENST00000618262 PTDSS1P48651 473 aaKnown RBP12.31□□□□□ -0.44
SRRT-216ENST00000618262 RCN2Q14257 317 aa12.31□□□□□ -0.44
SRRT-216ENST00000618262 METTL23Q86XA0 190 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms